FG538579

EST Overview
NameFG538579
Unique NameFG538579
TypeEST
OrganismPisum sativum (pea)
Sequence length511
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG538579 vs. TrEMBL
Match: D7U829_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_48.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027438001 PE=4 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.122e-21
Identity = 54/91 (59.34%), Postives = 66/91 (72.53%), Query Frame = 1
Query:    1 ISRFEILSSLQKNQRFMQFENLPPLRLAPPAVYHEKVSKVAHYQTGXXXXXXXXXXXXXRHKQNRELRVRGSSIRFPLKSSFFGKEKTNKR 273
            I RFEIL++LQK++R +Q ENLP LRLAPPAVYHEKV+K   + TG             + +Q REL+ +GSSIRFPLKSS FGKEKT+KR
Sbjct: 1844 IPRFEILNNLQKDKRAIQIENLPQLRLAPPAVYHEKVAKGIDFLTGESSSALAKIEKPSKTRQLRELKEKGSSIRFPLKSSIFGKEKTSKR 1934          
BLAST of FG538579 vs. TrEMBL
Match: B9RNK2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1339640 PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.773e-20
Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = 1
Query:    1 ISRFEILSSLQKNQRFMQFENLPPLRLAPPAVYHEKVSKVAHYQTG-XXXXXXXXXXXXXRHKQNRELRVRGSSIRFPLKSSFFGKEKTNKR 273
            +SRFEIL++LQK+QR +Q EN+P LRLAPPAVYHE+V K     TG              + +Q REL+V GSS+RFPLKSS FGKEK NKR
Sbjct: 1808 MSRFEILTNLQKDQRLVQIENMPQLRLAPPAVYHERVKKGPEVLTGESSSAIAKRIEKSSKRRQLRELKVTGSSLRFPLKSSIFGKEKINKR 1899          
BLAST of FG538579 vs. TrEMBL
Match: B9I947_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_774563 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.584e-10
Identity = 36/70 (51.43%), Postives = 44/70 (62.86%), Query Frame = 1
Query:    1 ISRFEILSSLQKNQRFMQFENLPPLRLAPPAVYHEKVSKVAHYQTGXXXXXXXXXXXXXRHKQNRELRVR 210
            ISRFEILSSLQK+++ +Q E++P LRLAPPAVYHEKV K     TG             + +Q RE R R
Sbjct: 1887 ISRFEILSSLQKDKKLVQIESMPQLRLAPPAVYHEKVKKGPDLLTGESSSALAEVEKPGKRRQLREARRR 1956          
BLAST of FG538579 vs. TrEMBL
Match: D7M5K4_ARALY (Protein binding protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_327694 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.244e-9
Identity = 31/43 (72.09%), Postives = 39/43 (90.70%), Query Frame = 1
Query:    1 ISRFEILSSLQKNQRFMQFENLPPLRLAPPAVYHEKVSKVAHY 129
            ISRFEILS+LQK+QR +Q E+LP LRLAPPAVYHEKVS+++ +
Sbjct:  720 ISRFEILSNLQKDQRLVQIESLPRLRLAPPAVYHEKVSRLSGF 762          
BLAST of FG538579 vs. TrEMBL
Match: Q0WMD8_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.625e-9
Identity = 30/46 (65.22%), Postives = 40/46 (86.96%), Query Frame = 1
Query:    1 ISRFEILSSLQKNQRFMQFENLPPLRLAPPAVYHEKVSKVAHYQTG 138
            +SRFEIL++LQK+QR +Q E+LP LRLAPPAVYHEKVS+++ +  G
Sbjct:  313 LSRFEILTNLQKDQRLVQIESLPRLRLAPPAVYHEKVSRLSGFTPG 358          
BLAST of FG538579 vs. TrEMBL
Match: B4FE02_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.856e-7
Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 1
Query:    1 ISRFEILSSLQKNQRFMQFENLPPLRLAPPAVYHEKVSKVAHYQTGXXXXXXXXXXXXXRHKQNRELRVRGSSIRFPLKSSF 246
            +SR+EIL++LQK Q+    E +PPL+LAPPA+YHEK+ K      G             +  Q +E + + +    P KSSF
Sbjct:  215 MSRYEILNNLQKAQKSFHIETVPPLKLAPPAIYHEKIQK-RTTSVGETSKHSVRSQKPQKIWQMKEKKSKEAGSHHPQKSSF 295          
BLAST of FG538579 vs. TAIR peptide
Match: AT4G00800.1 (| Symbols: | transducin family protein / WD-40 repeat family protein | chr4:337114-345581 REVERSE LENGTH=1913)

HSP 1 Score: 65.855 bits (159), Expect = 1.435e-11
Identity = 30/46 (65.22%), Postives = 40/46 (86.96%), Query Frame = 1
Query:    1 ISRFEILSSLQKNQRFMQFENLPPLRLAPPAVYHEKVSKVAHYQTG 138
            +SRFEIL++LQK+QR +Q E+LP LRLAPPAVYHEKVS+++ +  G
Sbjct: 1834 LSRFEILTNLQKDQRLVQIESLPRLRLAPPAVYHEKVSRLSGFTPG 1879          
The following BLAST results are available for this feature:
BLAST of FG538579 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
D7U829_VITVI4.122e-2159.34Whole genome shotgun sequence of line PN40024, sca... [more]
B9RNK2_RICCO7.773e-2057.61Putative uncharacterized protein OS=Ricinus commun... [more]
B9I947_POPTR5.584e-1051.43Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7M5K4_ARALY1.244e-972.09Protein binding protein OS=Arabidopsis lyrata subs... [more]
Q0WMD8_ARATH1.625e-965.22Putative uncharacterized protein OS=Arabidopsis th... [more]
B4FE02_MAIZE9.856e-737.80Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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BLAST of FG538579 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G00800.11.435e-1165.22| Symbols: | transducin family protein / WD-40 re... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 47..59
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG538579 ID=FG538579; Name=FG538579; organism=Pisum sativum; type=EST; length=511bp
ATATCACGGTTTGAGATCTTGAGCAGCTTGCAGAAAAATCAAAGATTTAT
GCAATTCGAAAATTTGCCTCCATTGAGGCTTGCCCCACCTGCTGTGTACC
ATGAAAAGGTAAGTAAAGTAGCACACTATCAGACCGGAGAAAGTAGCAAC
AGTTCTGCAATTATAGAGAAAAGTAGTCGTCACAAACAAAACCGGGAGCT
GAGAGTTAGAGGTTCTTCGATTCGTTTTCCTTTGAAATCAAGTTTTTTTG
GCAAGGAAAAGACGAATAAGCGATGACATAACTGTTTCATGAGAACAAGA
AATCAAGCAATAACAACTAACTAACTGTACAGGCTAACAGAAGATACCTC
TCTATTAGGAGATTTGATGTATCTCAATCCATTATTATTCTTTTTGTATC
TTACTCTAGTTTTTGTATATGTATGTATATAAGTTATATGCAGAAGGTTG
TGTATCTGTACAATAGAAAACCGATTCTAATGAGTTGATTCACTCAGACA
TTTTTGCATGT
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