FG538874

EST Overview


Name	FG538874
Unique Name	FG538874
Type	EST
Organism	Pisum sativum (pea)
Sequence length	622

Libraries


Library Name	Type
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of FG538874 vs. TrEMBL
Match: D7SVV0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_31.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022098001 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.469e-14
Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = -1

Query:   56 NHLRNGVRGLMLDMHDFQNDIWLCHSFRG*CFNFTSFQPA 175
            N LRNGVRGLMLDM+DF+NDIWLCHSFRG C+NFT+FQPA
Sbjct:  128 NQLRNGVRGLMLDMYDFENDIWLCHSFRGQCYNFTAFQPA 167

[Close]

BLAST of FG538874 vs. TrEMBL
Match: C6T948_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.449e-14
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = -1

Query:   56 NHLRNGVRGLMLDMHDFQNDIWLCHSFRG*CFNFTSFQPA 175
            N LRNGVRGLMLDM+DFQNDIWLCHSFRG C NFT+FQPA
Sbjct:  123 NQLRNGVRGLMLDMYDFQNDIWLCHSFRGQCHNFTAFQPA 162

[Close]

BLAST of FG538874 vs. TrEMBL
Match: B9HHA4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_218628 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.210e-13
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = -1

Query:   56 NHLRNGVRGLMLDMHDFQNDIWLCHSFRG*CFNFTSFQPA 175
            N LRNGVRGLMLDM+DF+ DIWLCHSFRG C+NFT+FQPA
Sbjct:   81 NQLRNGVRGLMLDMYDFEGDIWLCHSFRGQCYNFTAFQPA 120

[Close]

BLAST of FG538874 vs. TrEMBL
Match: B9H6H9_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_208631 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.210e-13
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = -1

Query:   56 NHLRNGVRGLMLDMHDFQNDIWLCHSFRG*CFNFTSFQPA 175
            N LRNGVRGLMLD++DF+ DIWLCHSFRG CFNFT+FQPA
Sbjct:   84 NQLRNGVRGLMLDLYDFEGDIWLCHSFRGQCFNFTAFQPA 123

[Close]

BLAST of FG538874 vs. TrEMBL
Match: D7MKT2_ARALY (Phospholipase C OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496887 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.152e-13
Identity = 33/40 (82.50%), Postives = 36/40 (90.00%), Query Frame = -1

Query:   56 NHLRNGVRGLMLDMHDFQNDIWLCHSFRG*CFNFTSFQPA 175
            N L+NGVRGLMLDM+DF NDIWLCHS RG CFNFT+FQPA
Sbjct:  119 NQLQNGVRGLMLDMYDFNNDIWLCHSLRGQCFNFTAFQPA 158

[Close]

BLAST of FG538874 vs. TrEMBL
Match: B9SCA3_RICCO (Phospholipase C, putative OS=Ricinus communis GN=RCOM_1410280 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.152e-13
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = -1

Query:   56 NHLRNGVRGLMLDMHDFQNDIWLCHSFRG*CFNFTSFQPA 175
            N LRNGVRGLMLDM+DF++DIWLCHSFRG CFNFT+F PA
Sbjct:  120 NQLRNGVRGLMLDMYDFEDDIWLCHSFRGQCFNFTAFGPA 159

[Close]

BLAST of FG538874 vs. TrEMBL
Match: Q9FXA0_ARATH (F14J22.5 protein OS=Arabidopsis thaliana GN=At1g49740 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.550e-12
Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = -1

Query:   56 NHLRNGVRGLMLDMHDFQNDIWLCHSFRG*CFNFTSFQPA 175
            + L NGVRG MLDM+DFQNDIWLCHSF G CFNFT+FQPA
Sbjct:  112 SQLNNGVRGFMLDMYDFQNDIWLCHSFDGTCFNFTAFQPA 151

[Close]

BLAST of FG538874 vs. TrEMBL
Match: B9H6H1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_208603 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.550e-12
Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = -1

Query:   56 NHLRNGVRGLMLDMHDFQNDIWLCHSFRG*CFNFTSFQPA 175
            + L+NGVRGLMLDM+DF NDIWLCHSF G C+NFT+FQPA
Sbjct:   83 SQLKNGVRGLMLDMYDFMNDIWLCHSFNGNCYNFTAFQPA 122

[Close]

BLAST of FG538874 vs. TrEMBL
Match: Q6YW97_ORYSJ (MAP3K protein kinase-like protein OS=Oryza sativa subsp. japonica GN=P0563F09.1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.055e-12
Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = -1

Query:   56 NHLRNGVRGLMLDMHDFQNDIWLCHSFRG*CFNFTSFQPA 175
            N LRNGVRGLMLDM+DF +DIWLCHS +G C+NFT+FQPA
Sbjct:  107 NQLRNGVRGLMLDMYDFNDDIWLCHSLQGQCYNFTAFQPA 146

[Close]

BLAST of FG538874 vs. TrEMBL
Match: C6TH52_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.055e-12
Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = -1

Query:   56 NHLRNGVRGLMLDMHDFQNDIWLCHSFRG*CFNFTSFQPA 175
            + L NGVRGLMLDM+DFQNDIWLCHSF G C+N+T+FQPA
Sbjct:  110 SQLNNGVRGLMLDMYDFQNDIWLCHSFGGQCYNYTAFQPA 149

[Close]

BLAST of FG538874 vs. SwissProt
Match: Y5713_ARATH (PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.033e-14
Identity = 33/40 (82.50%), Postives = 36/40 (90.00%), Query Frame = -1

Query:   56 NHLRNGVRGLMLDMHDFQNDIWLCHSFRG*CFNFTSFQPA 175
            N L+NGVRGLMLDM+DF NDIWLCHS RG CFNFT+FQPA
Sbjct:  119 NQLQNGVRGLMLDMYDFNNDIWLCHSLRGQCFNFTAFQPA 158

[Close]

BLAST of FG538874 vs. TAIR peptide
Match: AT5G67130.1 (| Symbols: | PLC-like phosphodiesterases superfamily protein | chr5:26791599-26793649 FORWARD LENGTH=426)

HSP 1 Score: 77.7962 bits (190), Expect = 5.210e-15
Identity = 33/40 (82.50%), Postives = 36/40 (90.00%), Query Frame = -1

Query:   56 NHLRNGVRGLMLDMHDFQNDIWLCHSFRG*CFNFTSFQPA 175
            N L+NGVRGLMLDM+DF NDIWLCHS RG CFNFT+FQPA
Sbjct:  119 NQLQNGVRGLMLDMYDFNNDIWLCHSLRGQCFNFTAFQPA 158

[Close]

BLAST of FG538874 vs. TAIR peptide
Match: AT1G49740.1 (| Symbols: | PLC-like phosphodiesterases superfamily protein | chr1:18407728-18409468 FORWARD LENGTH=359)

HSP 1 Score: 75.485 bits (184), Expect = 2.586e-14
Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = -1

Query:   56 NHLRNGVRGLMLDMHDFQNDIWLCHSFRG*CFNFTSFQPA 175
            + L NGVRG MLDM+DFQNDIWLCHSF G CFNFT+FQPA
Sbjct:  112 SQLNNGVRGFMLDMYDFQNDIWLCHSFDGTCFNFTAFQPA 151

[Close]

BLAST of FG538874 vs. TAIR peptide
Match: AT4G36945.1 (| Symbols: | PLC-like phosphodiesterases superfamily protein | chr4:17420098-17422047 REVERSE LENGTH=408)

HSP 1 Score: 73.559 bits (179), Expect = 9.826e-14
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = -1

Query:   56 NHLRNGVRGLMLDMHDFQNDIWLCHSFRG*CFNFTSFQPA 175
            N L+NGVRG+MLD +DFQNDIWLCHS  G CFNFT+FQPA
Sbjct:  108 NQLKNGVRGIMLDTYDFQNDIWLCHSTGGTCFNFTAFQPA 147

[Close]

BLAST of FG538874 vs. TAIR peptide
Match: AT3G19310.1 (| Symbols: | PLC-like phosphodiesterases superfamily protein | chr3:6694260-6696193 FORWARD LENGTH=413)

HSP 1 Score: 71.2478 bits (173), Expect = 4.877e-13
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = -1

Query:   56 NHLRNGVRGLMLDMHDFQNDIWLCHSFRG*CFNFTSFQPA 175
            + L NGVRG MLD++DFQNDIWLCHS+ G CFN+T+FQPA
Sbjct:  112 SQLLNGVRGFMLDLYDFQNDIWLCHSYGGNCFNYTAFQPA 151

[Close]

BLAST of FG538874 vs. TAIR peptide
Match: AT1G13680.1 (| Symbols: | PLC-like phosphodiesterases superfamily protein | chr1:4690409-4692702 FORWARD LENGTH=346)

HSP 1 Score: 52.373 bits (124), Expect = 2.344e-7
Identity = 21/38 (55.26%), Postives = 26/38 (68.42%), Query Frame = -1

Query:   56 LRNGVRGLMLDMHDFQNDIWLCHSFRG*CFNFTSFQPA 169
            L +GVR LMLD +D++ D+W CHSF   CF FT F  A
Sbjct:  108 LNSGVRALMLDTYDYEGDVWFCHSFDEQCFEFTKFNRA 145

The following BLAST results are available for this feature:

BLAST of FG538874 vs. TrEMBL
BLAST of FG538874 vs. SwissProt
BLAST of FG538874 vs. TAIR peptide

BLAST of FG538874 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7SVV0_VITVI	6.469e-14	85.00	Whole genome shotgun sequence of line PN40024, sca...	[more]
C6T948_SOYBN	8.449e-14	87.50	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9HHA4_POPTR	3.210e-13	82.50	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9H6H9_POPTR	3.210e-13	82.50	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
D7MKT2_ARALY	7.152e-13	82.50	Phospholipase C OS=Arabidopsis lyrata subsp. lyrat...	[more]
B9SCA3_RICCO	7.152e-13	82.50	Phospholipase C, putative OS=Ricinus communis GN=R...	[more]
Q9FXA0_ARATH	3.550e-12	80.00	F14J22.5 protein OS=Arabidopsis thaliana GN=At1g49...	[more]
B9H6H1_POPTR	3.550e-12	77.50	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
Q6YW97_ORYSJ	6.055e-12	77.50	MAP3K protein kinase-like protein OS=Oryza sativa ...	[more]
C6TH52_SOYBN	6.055e-12	77.50	Putative uncharacterized protein OS=Glycine max PE...	[more]

BLAST of FG538874 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
Y5713_ARATH	5.033e-14	82.50	PI-PLC X domain-containing protein At5g67130 OS=Ar...	[more]

BLAST of FG538874 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G67130.1	5.210e-15	82.50	\| Symbols: \| PLC-like phosphodiesterases superfam...	[more]
AT1G49740.1	2.586e-14	80.00	\| Symbols: \| PLC-like phosphodiesterases superfam...	[more]
AT4G36945.1	9.826e-14	77.50	\| Symbols: \| PLC-like phosphodiesterases superfam...	[more]
AT3G19310.1	4.877e-13	72.50	\| Symbols: \| PLC-like phosphodiesterases superfam...	[more]
AT1G13680.1	2.344e-7	55.26	\| Symbols: \| PLC-like phosphodiesterases superfam...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 33..53 score
None	No IPR available	SEG	seg	seg	coord: 4..23 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG538874 ID=FG538874; Name=FG538874; organism=Pisum sativum; type=EST; length=622bp
GGTCATGGTTTTGACTGAAAGGCTTCGTTTGTCTGTGTTCTGTTGTTTGT
CATGCTGCAGGTTGAAAGGAAGTGAAGTTGAAGCACTACCCTCGAAACGA
ATGACAGAGCCATATATCATTTTGAAAGTCGTGCATATCCAACATTAGTC
CTCGCACTCCGTTTCTCAAATGATTAGGCTGCCCTCTTGTACATATGGGT
TGGTTCAAAACACCAAAGCAGGACAATTACCGCAAAAAGACCCGACCCAC
AATCCGTAGCAGCAGAACAAGCTTTTAGAACCTGACAATTGCCGTTAGAA
CAGGTGGTGGAGGAGGTGAAAAAAAAGAGAAGAGATGAGTGGTAAAAGGA
AGAACATGCTGGTGGTTAGTGCTCTGCATTTTGAACAGAAATGTGAACAC
ATGGTTAGGTAGCTTTTACAGAAGAGCACTATAATGAATGAACTTAAGCT
ACAAAGCTACAAAGGTACTGTAAAATATAGAAGAAAGATGGATAATTCAA
CTTTGCTGGTGACTGATAATTTGTGTTCTTCTGCAAGTTTATTACCGCCG
CAAGGCTTGGAGGAAGCAATTTCGGTCATTGTCGACGCATGGCTTATATG
GCAGGGACTGGACTTGACCTTG

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