CD859447
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CD859447 vs. TrEMBL
Match: B7FKR4_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 4.774e-43 Identity = 98/163 (60.12%), Postives = 114/163 (69.94%), Query Frame = -2 Query: 1 LLRNASLFTRNLLHHHSS-STVPLAVSSHSRFRLFSSDEKPSPVPSI------------KDTAPVEIEDVDNKELKSRIDKYL-KGDEQMLPSIMEAIMQRKLSGKHEDTDDELMEELSMEPIXXXXXXXXXXXXXDLHETDEEIDDLYNARDIVMKRMVKDQ 447 LLRNASL+TRNLLHHH S +T PLA SS SRFR FSSDE PSP PS KD AP+E++DV NKE K+ I++YL K DE +LP+IM+AIM R+LSG HE+TDDE+M EL M PI + HETD EIDDLYNARD VMK+MVKDQ Sbjct: 5 LLRNASLYTRNLLHHHHSYTTAPLAASSLSRFRFFSSDENPSPPPSTNEEKPSTLPSIKKDPAPLEVKDVGNKEFKAMINQYLHKHDETVLPAIMDAIMVRRLSGLHEETDDEIMNELQMAPIDDVDDMDFENDFEETHETDNEIDDLYNARDHVMKKMVKDQ 167
BLAST of CD859447 vs. TrEMBL
Match: C6T1Q1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.101e-39 Identity = 87/149 (58.39%), Postives = 106/149 (71.14%), Query Frame = -2 Query: 1 LLRNASLFTRNLLHHHSSSTVPLAVSSHSRFRLFSSDEKPSPVPSIKDTAPVEIEDVDNKELKSRIDKYLKGDEQMLPSIMEAIMQRKLSGKHEDTDDELMEELSMEPIXXXXXXXXXXXXXDLHETDEEIDDLYNARDIVMKRMVKDQ 447 LLRNA+L+TRNLLH S S+ + RLF S+E P PVP +I+DVDNKELK++I+ Y KGDEQ+LPSIME I++RKLSGKHEDT DELMEEL M P+ ++H+TDEEIDDLYNARD+VMKRMVKD+ Sbjct: 5 LLRNATLYTRNLLHQ---SAPAFDASTRPQLRLFCSNETPPPVP--------QIDDVDNKELKAQIESYFKGDEQVLPSIMETILKRKLSGKHEDTGDELMEELRMRPLDDVDDRDFESDFENIHDTDEEIDDLYNARDVVMKRMVKDE 142
BLAST of CD859447 vs. TrEMBL
Match: D7SJ33_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00008338001 PE=4 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.818e-34 Identity = 86/168 (51.19%), Postives = 106/168 (63.10%), Query Frame = -2 Query: 1 LLRNASLFTRNLLHHHSS--STVPLAVSSHS------RFRLFSSD-----EKPSPVPSIKDTAP------VEIEDVDNKELKSRIDKYLKGDEQMLPSIMEAIMQRKLSGKHEDTDDELMEELSMEPIXXXXXXXXXXXXXDLHETDEEIDDLYNARDIVMKRMVKDQ 447 LLRN SL TR LL SS S P +SS + +FR FSS+ E P P+ P +++ DV NKELK RI+KY KGDE+ LPSI+EAIM RKL+GKHEDTDDELM+EL ++P+ +++ETDEEIDDLYNARDIVMKRM D+ Sbjct: 5 LLRNVSLCTRTLLSPSSSKPSASPTPISSSASASSAFKFRFFSSENDSSTENPKPLEETSLAQPQKKEVSIDVPDVSNKELKMRIEKYFKGDEEALPSILEAIMARKLAGKHEDTDDELMDELRLQPLDDVKDKDFESDFEEIYETDEEIDDLYNARDIVMKRMAHDE 172
BLAST of CD859447 vs. TrEMBL
Match: B9SFX0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0724570 PE=4 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.290e-34 Identity = 81/163 (49.69%), Postives = 108/163 (66.26%), Query Frame = -2 Query: 1 LLRNASLFTRNLLHHHS-----SSTVPLAVSSHSRFRLFSSD----EKPSPVPSI-----KDTAPVEIEDVDNKELKSRIDKYLKGDEQMLPSIMEAIMQRKLSGKHEDTDDELMEELSMEPIXXXXXXXXXXXXXDLHETDEEIDDLYNARDIVMKRMVKDQ 447 L RNA +TRNLL S +S LA+S+ +FR +SS+ KPSP ++ K V++ DV NKELK ++KY KGDE++LPSIMEAI+ RK SGKHE+TDDELMEEL M+P+ +L++TDEE+DDLYNA++ VMK+MVKD+ Sbjct: 6 LARNAIAYTRNLLQSSSIQASKTSNPSLAISTRCKFRFYSSEPDSSSKPSPESALLAQLKKKDDSVQVTDVSNKELKDLMEKYFKGDEEVLPSIMEAILSRKFSGKHEETDDELMEELRMKPLDDVKDKEFESDFEELYKTDEELDDLYNAKEHVMKKMVKDE 168
BLAST of CD859447 vs. TrEMBL
Match: B9IE66_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_251374 PE=4 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 6.053e-30 Identity = 74/164 (45.12%), Postives = 105/164 (64.02%), Query Frame = -2 Query: 1 LLRNASLFTRNLLHH--HSSSTVP---LAVSSHSRFRLFSSDEK---PSPVPSIKDTAPV-------EIEDVDNKELKSRIDKYLKGDEQMLPSIMEAIMQRKLSGKHEDTDDELMEELSMEPIXXXXXXXXXXXXXDLHETDEEIDDLYNARDIVMKRMVKDQ 447 L RN +L+TR+LL H + T+P LA S+H R R +S P P+P A + E++DV NKEL+ +DKY KGD ++LPSIMEA++QRKLS KHE+TDDELMEEL M+P+ +L+ETD+E++DL +A++ V K+M++DQ Sbjct: 5 LPRNVTLYTRHLLQSSPHPNPTIPNPSLAASTHPRLRFYSDSSNNTPPDPLPESSALAELKKKDDSDEVKDVSNKELREMMDKYFKGDGEVLPSIMEAVLQRKLSRKHEETDDELMEELRMKPLSDVDAEEFQSDFDELYETDKELNDLCDAKEYVAKKMMQDQ 168
BLAST of CD859447 vs. TrEMBL
Match: Q9LJQ6_ARATH (AT3G18240 protein OS=Arabidopsis thaliana GN=AT3G18240 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.348e-20 Identity = 65/170 (38.24%), Postives = 94/170 (55.29%), Query Frame = -2 Query: 1 LLRNASLFTRNLL-----HHHSSSTVP----LAVSSHSRFRLFSSDE----------KPSPVPSIKDTAPVEIEDVDNKELKSRIDKYL-KGDEQMLPSIMEAIMQRKLSGKHEDTDDELMEELSMEPI-XXXXXXXXXXXXXDLHETDEEIDDLYNARDIVMKRMVKDQ 447 LLRNASL R ++ H S VP +A + +FR FSS+ P+ P KD +EDV NKELKSRI+KY +G+E LP ++EA++QR+L KH +TDDEL+E++ P + H TDEE++DLYN+ + V ++M K++ Sbjct: 5 LLRNASLCARRIILSPRITHQISPNVPFLAPIAAPAAPKFRFFSSESGENSTTAPESSPTDSPEKKDLV---VEDVSNKELKSRIEKYFNEGNEDALPGVIEALLQRRLVDKHAETDDELLEKIESLPFKDDVKDEDFESDFEEAHSTDEELEDLYNSPEYVAEKMRKNE 171
BLAST of CD859447 vs. TrEMBL
Match: Q683K3_ARATH (Putative uncharacterized protein At4g21460 OS=Arabidopsis thaliana GN=At4g21460 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.158e-19 Identity = 63/164 (38.41%), Postives = 91/164 (55.49%), Query Frame = -2 Query: 1 LLRNASLFTRNLLHHHSSST-----VPLAVSSHSRFRLFSSDE--------KPSPVPSIKDTAPVEIEDVDNKELKSRIDK-YLKGDEQMLPSIMEAIMQRKLSGKHEDTDDELMEELSMEPI-XXXXXXXXXXXXXDLHETDEEIDDLYNARDIVMKRMVKDQ 447 L RNASL R ++ S P+A + +FR FSS+ + SP S D + +EDV NKELKSRIDK + +G+E LP ++EA++QR+L KH +TDDELME++ P + H TDEE++DLYN+ + V ++M K + Sbjct: 5 LFRNASLCARRIILSSRISPNVPFLTPIAAPAPPKFRFFSSESGENSTTATESSPTDS-SDKKDLVVEDVSNKELKSRIDKSFNEGNEDALPGVIEALLQRRLVDKHAETDDELMEKIESLPFKDDVKDEDFESDFEEAHSTDEELEDLYNSPEYVAEKMRKKE 167
BLAST of CD859447 vs. TrEMBL
Match: D7L8F9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479322 PE=4 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.399e-18 Identity = 65/170 (38.24%), Postives = 94/170 (55.29%), Query Frame = -2 Query: 1 LLRNASLFTRNLL-----HHHSSSTVP----LAVSSHSRFRLFSSDEKPSPVPSIK--DTAPVE--------IEDVDNKELKSRIDKYL-KGDEQMLPSIMEAIMQRKLSGKHEDTDDELMEELSMEPI-XXXXXXXXXXXXXDLHETDEEIDDLYNARDIVMKRMVKDQ 447 L RNASL R + H S VP +A + +F FSS+ S S D++P E +EDV NKELKSRI+KY +G+E LP ++EA++QR+L+ KH +TDDEL+E++ P D H TDEE++DLYN+ + V ++M K++ Sbjct: 5 LFRNASLCARRFILSPRITHQISPNVPFLAPIASPAPLKFSFFSSESDSSGENSTTAPDSSPSESSDKKDLVVEDVSNKELKSRIEKYFNEGNEDALPGVIEALLQRRLADKHAETDDELIEKIETLPFKDDVKDEDFESDFEDAHSTDEELEDLYNSPEYVAEKMRKNE 174
BLAST of CD859447 vs. TrEMBL
Match: O65411_ARATH (Putative uncharacterized protein AT4g21460 OS=Arabidopsis thaliana GN=F18E5.80 PE=4 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.020e-17 Identity = 54/138 (39.13%), Postives = 81/138 (58.70%), Query Frame = -2 Query: 1 PLAVSSHSRFRLFSSDE--------KPSPVPSIKDTAPVEIEDVDNKELKSRIDK-YLKGDEQMLPSIMEAIMQRKLSGKHEDTDDELMEELSMEPI-XXXXXXXXXXXXXDLHETDEEIDDLYNARDIVMKRMVKDQ 384 P+A + +FR FSS+ + SP S D + ++DV NKELKSRIDK + +G+E LP ++EA++QR+L KH +TDDELME++ P + H TDEE++DLYN+ + V ++M K + Sbjct: 36 PIAAPAPPKFRFFSSESGENSTTATESSPTDS-SDKKDLVVKDVSNKELKSRIDKSFNEGNEDALPGVIEALLQRRLVDKHAETDDELMEKIESLPFKDDVKDEDFESDFEEAHSTDEELEDLYNSPEYVAEKMRKKE 172
BLAST of CD859447 vs. TrEMBL
Match: Q6Z8N1_ORYSJ (Os08g0513300 protein OS=Oryza sativa subsp. japonica GN=P0711H09.20 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.445e-17 Identity = 46/103 (44.66%), Postives = 65/103 (63.11%), Query Frame = -2 Query: 1 DTAPVEIEDVDNKELKSRIDKYLK-GDEQMLPSIMEAIMQRKLSGKHEDTDDELMEELSMEPIXXXXXXXXXXXXXDLHETDEEIDDLYNARDIVMKRMVKDQ 306 D AP DV NKELK R++ Y DE LPS+ EA+++RKL+ H +TDDEL+EEL +P+ ++H+TDEE+D+LYNAR V K++ D+ Sbjct: 42 DAAPPPAADVPNKELKRRLETYYGVDDEAELPSVTEAVLERKLADVHSETDDELIEELRSKPLPEVRDRDFESDFEEMHDTDEELDNLYNARQYVEKKIKSDE 144
BLAST of CD859447 vs. TAIR peptide
Match: AT3G18240.2 (| Symbols: | Ribosomal protein S24/S35, mitochondrial | chr3:6255810-6257695 FORWARD LENGTH=419) HSP 1 Score: 100.908 bits (250), Expect = 3.671e-22 Identity = 65/170 (38.24%), Postives = 94/170 (55.29%), Query Frame = -2 Query: 1 LLRNASLFTRNLL-----HHHSSSTVP----LAVSSHSRFRLFSSDE----------KPSPVPSIKDTAPVEIEDVDNKELKSRIDKYL-KGDEQMLPSIMEAIMQRKLSGKHEDTDDELMEELSMEPI-XXXXXXXXXXXXXDLHETDEEIDDLYNARDIVMKRMVKDQ 447 LLRNASL R ++ H S VP +A + +FR FSS+ P+ P KD +EDV NKELKSRI+KY +G+E LP ++EA++QR+L KH +TDDEL+E++ P + H TDEE++DLYN+ + V ++M K++ Sbjct: 5 LLRNASLCARRIILSPRITHQISPNVPFLAPIAAPAAPKFRFFSSESGENSTTAPESSPTDSPEKKDLV---VEDVSNKELKSRIEKYFNEGNEDALPGVIEALLQRRLVDKHAETDDELLEKIESLPFKDDVKDEDFESDFEEAHSTDEELEDLYNSPEYVAEKMRKNE 171
BLAST of CD859447 vs. TAIR peptide
Match: AT3G18240.1 (| Symbols: | Ribosomal protein S24/S35, mitochondrial | chr3:6255810-6257695 FORWARD LENGTH=419) HSP 1 Score: 100.908 bits (250), Expect = 3.671e-22 Identity = 65/170 (38.24%), Postives = 94/170 (55.29%), Query Frame = -2 Query: 1 LLRNASLFTRNLL-----HHHSSSTVP----LAVSSHSRFRLFSSDE----------KPSPVPSIKDTAPVEIEDVDNKELKSRIDKYL-KGDEQMLPSIMEAIMQRKLSGKHEDTDDELMEELSMEPI-XXXXXXXXXXXXXDLHETDEEIDDLYNARDIVMKRMVKDQ 447 LLRNASL R ++ H S VP +A + +FR FSS+ P+ P KD +EDV NKELKSRI+KY +G+E LP ++EA++QR+L KH +TDDEL+E++ P + H TDEE++DLYN+ + V ++M K++ Sbjct: 5 LLRNASLCARRIILSPRITHQISPNVPFLAPIAAPAAPKFRFFSSESGENSTTAPESSPTDSPEKKDLV---VEDVSNKELKSRIEKYFNEGNEDALPGVIEALLQRRLVDKHAETDDELLEKIESLPFKDDVKDEDFESDFEEAHSTDEELEDLYNSPEYVAEKMRKNE 171
BLAST of CD859447 vs. TAIR peptide
Match: AT4G21460.1 (| Symbols: | Ribosomal protein S24/S35, mitochondrial | chr4:11428530-11430390 FORWARD LENGTH=415) HSP 1 Score: 98.5969 bits (244), Expect = 1.822e-21 Identity = 63/164 (38.41%), Postives = 91/164 (55.49%), Query Frame = -2 Query: 1 LLRNASLFTRNLLHHHSSST-----VPLAVSSHSRFRLFSSDE--------KPSPVPSIKDTAPVEIEDVDNKELKSRIDK-YLKGDEQMLPSIMEAIMQRKLSGKHEDTDDELMEELSMEPI-XXXXXXXXXXXXXDLHETDEEIDDLYNARDIVMKRMVKDQ 447 L RNASL R ++ S P+A + +FR FSS+ + SP S D + +EDV NKELKSRIDK + +G+E LP ++EA++QR+L KH +TDDELME++ P + H TDEE++DLYN+ + V ++M K + Sbjct: 5 LFRNASLCARRIILSSRISPNVPFLTPIAAPAPPKFRFFSSESGENSTTATESSPTDS-SDKKDLVVEDVSNKELKSRIDKSFNEGNEDALPGVIEALLQRRLVDKHAETDDELMEKIESLPFKDDVKDEDFESDFEEAHSTDEELEDLYNSPEYVAEKMRKKE 167
BLAST of CD859447 vs. TAIR peptide
Match: AT1G73770.2 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:27742215-27742956 FORWARD LENGTH=191) HSP 1 Score: 64.6994 bits (156), Expect = 2.915e-11 Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = -2 Query: 121 LLRNASLFTRNLLH----------HHSSSTVPLAVSSHSRFRLFSSDEKPSPVPSIKDTAPVEIEDVDNKE-LKSRIDKYLK-GDEQMLPSIMEAIMQRKLSGKHEDTDDELMEELSMEPI 447 L R SL RN+LH ++ VPL + SRF FSS+ S E+V +KE LK RI +L G+E +P + EA+M RKLSGKH+D+DDE+M+ + P+ Sbjct: 5 LQRVPSLLARNILHSPANFRHLRINNPRVVVPLFERAISRFVFFSSESDSS--------RGFRTEEVLSKEELKKRIQSFLDDGNEDAIPDLFEALMIRKLSGKHDDSDDEVMDVVRKYPV 117
BLAST of CD859447 vs. TAIR peptide
Match: AT1G73770.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT3G18240.2); Has 951 Blast hits to 569 proteins in 87 species: Archae - 0; Bacteria - 746; Metazoa - 33; Fungi - 46; Plants - 57; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink). | chr1:27742215-27742956 FORWARD LENGTH=191) HSP 1 Score: 64.6994 bits (156), Expect = 2.915e-11 Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = -2 Query: 121 LLRNASLFTRNLLH----------HHSSSTVPLAVSSHSRFRLFSSDEKPSPVPSIKDTAPVEIEDVDNKE-LKSRIDKYLK-GDEQMLPSIMEAIMQRKLSGKHEDTDDELMEELSMEPI 447 L R SL RN+LH ++ VPL + SRF FSS+ S E+V +KE LK RI +L G+E +P + EA+M RKLSGKH+D+DDE+M+ + P+ Sbjct: 5 LQRVPSLLARNILHSPANFRHLRINNPRVVVPLFERAISRFVFFSSESDSS--------RGFRTEEVLSKEELKKRIQSFLDDGNEDAIPDLFEALMIRKLSGKHDDSDDEVMDVVRKYPV 117 The following BLAST results are available for this feature:
BLAST of CD859447 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of CD859447 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 5
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CD859447 ID=CD859447; Name=CD859447; organism=Pisum sativum; type=EST; length=487bpback to top |