EX568860

EST Overview


Name	EX568860
Unique Name	EX568860
Type	EST
Organism	Pisum sativum (pea)
Sequence length	576

Libraries


Library Name	Type
LIBEST_021973 Pisum sativum shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

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BLAST of EX568860 vs. TrEMBL
Match: A2ICP9_PEA (Ran1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 8.376e-68
Identity = 126/131 (96.18%), Postives = 126/131 (96.18%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLP     AFE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPDDDDDAFE 221

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BLAST of EX568860 vs. TrEMBL
Match: B7FGV3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 8.668e-65
Identity = 119/131 (90.84%), Postives = 123/131 (93.89%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQID+  QQ+HENE+ +AANQPLP     AFE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLVAQQQHENELQQAANQPLPDDDDDAFE 221

[Close]

BLAST of EX568860 vs. TrEMBL
Match: B7FGN7_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.132e-64
Identity = 120/131 (91.60%), Postives = 123/131 (93.89%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQID+A QQ HEN +L+AANQPLP     AFE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAAQQVHENGLLQAANQPLPDDDDDAFE 221

[Close]

BLAST of EX568860 vs. TrEMBL
Match: Q9FSZ5_CICAR (GTP-binding protein OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.294e-64
Identity = 119/131 (90.84%), Postives = 122/131 (93.13%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQID+  QQ+HE EI +AANQPLP     AFE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLVAQQQHEAEIAQAANQPLPDDDDDAFE 221

[Close]

BLAST of EX568860 vs. TrEMBL
Match: B7FN11_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.302e-64
Identity = 119/131 (90.84%), Postives = 122/131 (93.13%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQID+A QQ  ENE+L+AANQPLP      FE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAAQQVQENELLQAANQPLPDDDDDTFE 221

[Close]

BLAST of EX568860 vs. TrEMBL
Match: Q8S2Z7_HELAN (GTP-binding protein OS=Helianthus annuus GN=RAN PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.135e-63
Identity = 118/131 (90.08%), Postives = 122/131 (93.13%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQID+A QQ+HE E+  AA+QPLP     AFE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDMAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of EX568860 vs. TrEMBL
Match: Q6J9G2_NICSY (RAN OS=Nicotiana sylvestris GN=ran PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 4.756e-63
Identity = 118/131 (90.08%), Postives = 121/131 (92.37%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEVQID+A QQ HE E+L+AA QPLP     AFE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDLAAQQLHEQELLQAAAQPLPDDDDEAFE 221

[Close]

BLAST of EX568860 vs. TrEMBL
Match: D7TBW7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015482001 PE=4 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.212e-63
Identity = 117/131 (89.31%), Postives = 121/131 (92.37%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEV ID+A QQ+HE E+  AA+QPLP     AFE
Sbjct:  130 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 260

[Close]

BLAST of EX568860 vs. TrEMBL
Match: D7SUQ1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035804001 PE=4 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.212e-63
Identity = 117/131 (89.31%), Postives = 121/131 (92.37%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEV ID+A QQ+HE E+  AA+QPLP     AFE
Sbjct:  124 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 254

[Close]

BLAST of EX568860 vs. TrEMBL
Match: C6SW66_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.113e-63
Identity = 116/131 (88.55%), Postives = 122/131 (93.13%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYL RKLAGDPNLHFVESPALAPPEVQID+A +Q+HE E+L AA+QPLP     +FE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLVRKLAGDPNLHFVESPALAPPEVQIDLAARQQHEAELLAAASQPLPDDDDESFE 221

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BLAST of EX568860 vs. SwissProt
Match: RAN_VICFA (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 5.118e-68
Identity = 125/131 (95.42%), Postives = 125/131 (95.42%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLP     AFE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPDDDDDAFE 221

[Close]

BLAST of EX568860 vs. SwissProt
Match: RAN1A_LOTJA (GTP-binding nuclear protein Ran1A (Fragment) OS=Lotus japonicus GN=RAN1A PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.180e-64
Identity = 117/131 (89.31%), Postives = 123/131 (93.89%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQID+A QQ+HE E+ +AA+QPLP     AF+
Sbjct:   79 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAAQQQHEAELAQAASQPLPDDDDDAFD 209

[Close]

BLAST of EX568860 vs. SwissProt
Match: RAN1B_LOTJA (GTP-binding nuclear protein Ran1B (Fragment) OS=Lotus japonicus GN=RAN1B PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 2.629e-64
Identity = 117/131 (89.31%), Postives = 122/131 (93.13%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQID+A QQ+HE E+  AA+QPLP     AF+
Sbjct:   79 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDAFD 209

[Close]

BLAST of EX568860 vs. SwissProt
Match: RANA1_TOBAC (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 7.648e-64
Identity = 116/131 (88.55%), Postives = 121/131 (92.37%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQID+A QQ+HE E+  AA+QPLP      F+
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDETFD 221

[Close]

BLAST of EX568860 vs. SwissProt
Match: RAN3_ARATH (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana GN=RAN3 PE=1 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 2.906e-63
Identity = 116/131 (88.55%), Postives = 120/131 (91.60%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEVQID+A QQ+HE E+  AA+QPLP      FE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of EX568860 vs. SwissProt
Match: RAN1_SOLLC (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum GN=RAN1 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 4.957e-63
Identity = 116/131 (88.55%), Postives = 119/131 (90.84%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEV ID+A Q  HE E+ +AANQPLP     AFE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFVESPALAPPEVHIDLAAQALHEEELQQAANQPLPDDDDEAFE 221

[Close]

BLAST of EX568860 vs. SwissProt
Match: RANB1_TOBAC (GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum GN=RAN-B1 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.104e-62
Identity = 116/131 (88.55%), Postives = 119/131 (90.84%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEVQID+A QQ HE E+L+AA   LP     AFE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDLAAQQLHEQELLQAAAHALPDDDDEAFE 221

[Close]

BLAST of EX568860 vs. SwissProt
Match: RAN2_SOLLC (GTP-binding nuclear protein Ran2 OS=Solanum lycopersicum GN=RAN2 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.104e-62
Identity = 116/131 (88.55%), Postives = 118/131 (90.08%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEVQID+A Q  HE E+  A NQPLP     AFE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFVESPALAPPEVQIDLAAQALHEQELQAALNQPLPDDDDEAFE 221

[Close]

BLAST of EX568860 vs. SwissProt
Match: RAN1_ARATH (GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 5.481e-62
Identity = 115/131 (87.79%), Postives = 120/131 (91.60%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVE+PALAPPEV IDIA QQ++E E+L+AA QPLP      FE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVETPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]

BLAST of EX568860 vs. SwissProt
Match: RAN2_ARATH (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana GN=RAN2 PE=1 SV=3)

HSP 1 Score: 235.728 bits (600), Expect = 1.221e-61
Identity = 114/131 (87.02%), Postives = 119/131 (90.84%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEV +DIA QQ++E ++  AA QPLP     AFE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of EX568860 vs. TAIR peptide
Match: AT5G55190.1 (| Symbols: RAN3, ATRAN3 | RAN GTPase 3 | chr5:22392285-22393957 FORWARD LENGTH=221)

HSP 1 Score: 241.121 bits (614), Expect = 3.087e-64
Identity = 116/131 (88.55%), Postives = 120/131 (91.60%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEVQID+A QQ+HE E+  AA+QPLP      FE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of EX568860 vs. TAIR peptide
Match: AT5G20010.1 (| Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear protein-1 | chr5:6760364-6761747 FORWARD LENGTH=221)

HSP 1 Score: 236.884 bits (603), Expect = 5.823e-63
Identity = 115/131 (87.79%), Postives = 120/131 (91.60%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVE+PALAPPEV IDIA QQ++E E+L+AA QPLP      FE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVETPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]

BLAST of EX568860 vs. TAIR peptide
Match: AT5G20020.1 (| Symbols: RAN2 | RAS-related GTP-binding nuclear protein 2 | chr5:6762817-6764381 FORWARD LENGTH=221)

HSP 1 Score: 235.728 bits (600), Expect = 1.297e-62
Identity = 114/131 (87.02%), Postives = 119/131 (90.84%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPLPXXXXXAFE 395
            IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NLHFVESPALAPPEV +DIA QQ++E ++  AA QPLP     AFE
Sbjct:   91 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

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BLAST of EX568860 vs. TAIR peptide
Match: AT5G55080.1 (| Symbols: AtRAN4, RAN4 | ras-related nuclear protein 4 | chr5:22351576-22353058 REVERSE LENGTH=222)

HSP 1 Score: 152.525 bits (384), Expect = 1.444e-37
Identity = 78/122 (63.93%), Postives = 92/122 (75.41%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDIALQQRHENEILEAANQPL 368
            IMFDVTAR TY N+  W+RDL RVC+NIPIVLCGNKVDV +RQ+K K V++HRKK LQYYE+SAK+N NFEKPFLYLAR++AGD  L FVES     PE QID    +  +   +EA  QPL
Sbjct:   91 IMFDVTARHTYMNIDRWYRDLRRVCKNIPIVLCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAGDAKLSFVES-----PEAQIDNLDVESLQLLTVEAGTQPL 207

[Close]

BLAST of EX568860 vs. TAIR peptide
Match: AT5G39620.1 (| Symbols: AtRABG1, RABG1 | RAB GTPase homolog G1 | chr5:15864166-15865782 REVERSE LENGTH=204)

HSP 1 Score: 52.373 bits (124), Expect = 2.034e-7
Identity = 30/90 (33.33%), Postives = 48/90 (53.33%), Query Frame = 3

Query:    3 IMFDVTARLTYKNVPTWHRDLCRVCE-----NIPIVLCGNKVDVKNRQ--VKAKQVTFH---RKKNLQYYEISAKSNYNFEKPFLYLARK 242
            +++DV    T++++  WH +  +          P VL GNK DV N +  V AK++       K N+ Y+E SAK+  N E+ FL +A+K
Sbjct:   83 LVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGNKTDVNNGKPRVVAKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEIAKK 172

The following BLAST results are available for this feature:

BLAST of EX568860 vs. TrEMBL
BLAST of EX568860 vs. SwissProt
BLAST of EX568860 vs. TAIR peptide

BLAST of EX568860 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A2ICP9_PEA	8.376e-68	96.18	Ran1 OS=Pisum sativum PE=2 SV=1	[more]
B7FGV3_MEDTR	8.668e-65	90.84	Putative uncharacterized protein OS=Medicago trunc...	[more]
B7FGN7_MEDTR	1.132e-64	91.60	Putative uncharacterized protein OS=Medicago trunc...	[more]
Q9FSZ5_CICAR	3.294e-64	90.84	GTP-binding protein OS=Cicer arietinum PE=2 SV=1	[more]
B7FN11_MEDTR	4.302e-64	90.84	Putative uncharacterized protein OS=Medicago trunc...	[more]
Q8S2Z7_HELAN	2.135e-63	90.08	GTP-binding protein OS=Helianthus annuus GN=RAN PE...	[more]
Q6J9G2_NICSY	4.756e-63	90.08	RAN OS=Nicotiana sylvestris GN=ran PE=2 SV=1	[more]
D7TBW7_VITVI	6.212e-63	89.31	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7SUQ1_VITVI	6.212e-63	89.31	Whole genome shotgun sequence of line PN40024, sca...	[more]
C6SW66_SOYBN	8.113e-63	88.55	Putative uncharacterized protein OS=Glycine max PE...	[more]

BLAST of EX568860 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RAN_VICFA	5.118e-68	95.42	GTP-binding nuclear protein Ran/TC4 OS=Vicia faba ...	[more]
RAN1A_LOTJA	1.180e-64	89.31	GTP-binding nuclear protein Ran1A (Fragment) OS=Lo...	[more]
RAN1B_LOTJA	2.629e-64	89.31	GTP-binding nuclear protein Ran1B (Fragment) OS=Lo...	[more]
RANA1_TOBAC	7.648e-64	88.55	GTP-binding nuclear protein Ran-A1 OS=Nicotiana ta...	[more]
RAN3_ARATH	2.906e-63	88.55	GTP-binding nuclear protein Ran-3 OS=Arabidopsis t...	[more]
RAN1_SOLLC	4.957e-63	88.55	GTP-binding nuclear protein Ran1 OS=Solanum lycope...	[more]
RANB1_TOBAC	1.104e-62	88.55	GTP-binding nuclear protein Ran-B1 OS=Nicotiana ta...	[more]
RAN2_SOLLC	1.104e-62	88.55	GTP-binding nuclear protein Ran2 OS=Solanum lycope...	[more]
RAN1_ARATH	5.481e-62	87.79	GTP-binding nuclear protein Ran-1 OS=Arabidopsis t...	[more]
RAN2_ARATH	1.221e-61	87.02	GTP-binding nuclear protein Ran-2 OS=Arabidopsis t...	[more]

BLAST of EX568860 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G55190.1	3.087e-64	88.55	\| Symbols: RAN3, ATRAN3 \| RAN GTPase 3 \| chr5:2239...	[more]
AT5G20010.1	5.823e-63	87.79	\| Symbols: RAN-1, RAN1, ATRAN1 \| RAS-related nucle...	[more]
AT5G20020.1	1.297e-62	87.02	\| Symbols: RAN2 \| RAS-related GTP-binding nuclear ...	[more]
AT5G55080.1	1.444e-37	63.93	\| Symbols: AtRAN4, RAN4 \| ras-related nuclear prot...	[more]
AT5G39620.1	2.034e-7	33.33	\| Symbols: AtRABG1, RABG1 \| RAB GTPase homolog G1 ...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002041	Ran GTPase	PRINTS	PR00627	GTPRANTC4	coord: 4..25 score: 8.8e-37coord: 40..58 score: 8.8e-37coord: 78..100 score: 8.8
IPR002041	Ran GTPase	SMART	SM00176	no description	coord: 1..130 score: 3.2
IPR002041	Ran GTPase	PROFILE	PS51418	RAN	coord: 1..81 score: 12
IPR003579	Ras small GTPase, Rab type	SMART	SM00175	no description	coord: 1..84 score: 0.0
IPR013753	Ras	PFAM	PF00071	Ras	coord: 1..81 score: 8.5
None	No IPR available	GENE3D	3.40.50.300	no description	coord: 1..112 score: 6
None	No IPR available	PANTHER	PTHR11708	RAS-RELATED GTPASE	coord: 1..47 score: 2.4
None	No IPR available	PANTHER	PTHR11708:SF269	GTP-BINDING NUCLEAR PROTEIN RAN	coord: 1..47 score: 2.4
None	No IPR available	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..109 score: 1
None	No IPR available	SEG	seg	seg	coord: 54..65 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EX568860 ID=EX568860; Name=EX568860; organism=Pisum sativum; type=EST; length=576bp
TTATAATGTTTGATGTTACTGCTAGACTGACATACAAAAATGTTCCTACC
TGGCACCGTGATCTTTGTCGGGTTTGTGAAAACATCCCAATTGTTCTTTG
CGGAAACAAGGTTGATGTGAAGAACAGGCAAGTGAAGGCAAAGCAGGTTA
CTTTCCACAGGAAGAAGAATTTGCAATACTATGAGATATCAGCTAAGAGC
AACTACAACTTTGAGAAGCCTTTCCTGTATCTTGCCAGGAAACTTGCAGG
AGATCCTAATTTGCACTTTGTAGAATCTCCTGCACTGGCTCCACCAGAAG
TTCAAATTGATATCGCCTTACAACAAAGGCATGAAAATGAAATTCTCGAA
GCTGCTAATCAGCCCCTTCCTGATGACGATGATGATGCATTTGAGTAGAG
AAAGGACCCTTGGGATTGATGGCTTTTGTCTTGAGCTGGCACTGTTGTGT
ATTCTATAAAACTATGTGTTTGAGGTTGAACTATGAACATTTTTGGATAT
AGATTTGGGGTTCTTGATTTATTCATGGTGCGATTGAGATGTTTTACTTT
TATGCCAACCCTCACTTAATGGACGG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005515	protein binding
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport
GO:0006913	nucleocytoplasmic transport
GO:0007165	signal transduction
GO:0007264	small GTPase-mediated signal transduction
GO:0015031	protein transport

Vocabulary: **INTERPRO**
Term	Definition
IPR002041	Ran_GTPase
IPR003579	Small_GTPase_Rab_type
IPR013753	Ras

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