EX569539
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX569539 vs. TrEMBL
Match: B9GUI0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816318 PE=4 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.303e-24 Identity = 55/96 (57.29%), Postives = 67/96 (69.79%), Query Frame = 2 Query: 2 QVQQLNKSVWNMNXXXXXXXXXXXAHCVPTSR--IENYMPSSAASFLYPTDSSDRKRECLIEGWDIVEHPTLPPPPSQSEDVEHWTRAMFIDAKRK 283 QVQ+LNKSVWN+N AH + + +N +P+SAASFL+ T SD K E I+GWD+VEHPT PPPPSQ ED+EHWTRAMFIDA +K Sbjct: 380 QVQKLNKSVWNVNSAISSSALLESAHALQLMKNTSDNNLPNSAASFLFATGISDGKNESFIDGWDLVEHPTFPPPPSQVEDIEHWTRAMFIDATKK 475
BLAST of EX569539 vs. TrEMBL
Match: B9T6K6_RICCO (DNA-directed RNA polymerase II, putative OS=Ricinus communis GN=RCOM_0261650 PE=4 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.548e-22 Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = 2 Query: 2 QVQQLNKSVWNMNXXXXXXXXXXXAHCVPTSRI--ENYMPSSAASFLYPTDSSDR-KRECLIEGWDIVEHPTLPPPPSQSEDVEHWTRAMFIDAKRK 283 QVQ+LNKSVWN+N AH ++ +N + +SA SFL+ + SD K E LI+GWD+VEHPT PPPPSQ+EDVEHWTRAMFIDA +K Sbjct: 382 QVQKLNKSVWNVNSIISSSTLMESAHAPHLTKNINDNNLRNSATSFLFANEISDAGKNESLIDGWDLVEHPTFPPPPSQTEDVEHWTRAMFIDATKK 478
BLAST of EX569539 vs. TrEMBL
Match: Q9M0T0_ARATH (Putative uncharacterized protein AT4g08540 OS=Arabidopsis thaliana GN=AT4g08540 PE=4 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.811e-19 Identity = 52/94 (55.32%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 2 QVQQLNKSVWNMNXXXXXXXXXXXAHCVPTSRIENYMPSSAASFLYPTDSSDRKRECLIEGWDIVEHPTLPPPPSQSEDVEHWTRAMFIDAKRK 283 Q QQLNKS+WN + AH +P + N P+S AS+L T+ S RK + GWD+VEHP PPPPSQSEDVEHWTRAMFIDAK+K Sbjct: 357 QAQQLNKSIWNAHSVISSSLLES-AH-LPRNTSYNQDPNSPASYLSATELSTRKNNDM-NGWDLVEHPKYPPPPSQSEDVEHWTRAMFIDAKKK 447
BLAST of EX569539 vs. TrEMBL
Match: Q8VYD5_ARATH (Putative uncharacterized protein At4g08540 OS=Arabidopsis thaliana GN=At4g08540 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.811e-19 Identity = 52/94 (55.32%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 2 QVQQLNKSVWNMNXXXXXXXXXXXAHCVPTSRIENYMPSSAASFLYPTDSSDRKRECLIEGWDIVEHPTLPPPPSQSEDVEHWTRAMFIDAKRK 283 Q QQLNKS+WN + AH +P + N P+S AS+L T+ S RK + GWD+VEHP PPPPSQSEDVEHWTRAMFIDAK+K Sbjct: 383 QAQQLNKSIWNAHSVISSSLLES-AH-LPRNTSYNQDPNSPASYLSATELSTRKNNDM-NGWDLVEHPKYPPPPSQSEDVEHWTRAMFIDAKKK 473
BLAST of EX569539 vs. TrEMBL
Match: Q8H1E1_ARATH (Putative uncharacterized protein At4g08540 OS=Arabidopsis thaliana GN=At4g08540 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.811e-19 Identity = 52/94 (55.32%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 2 QVQQLNKSVWNMNXXXXXXXXXXXAHCVPTSRIENYMPSSAASFLYPTDSSDRKRECLIEGWDIVEHPTLPPPPSQSEDVEHWTRAMFIDAKRK 283 Q QQLNKS+WN + AH +P + N P+S AS+L T+ S RK + GWD+VEHP PPPPSQSEDVEHWTRAMFIDAK+K Sbjct: 383 QAQQLNKSIWNAHSVISSSLLES-AH-LPRNTSYNQDPNSPASYLSATELSTRKNNDM-NGWDLVEHPKYPPPPSQSEDVEHWTRAMFIDAKKK 473
BLAST of EX569539 vs. TrEMBL
Match: C0Z3G8_ARATH (AT4G08540 protein OS=Arabidopsis thaliana GN=AT4G08540 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.811e-19 Identity = 52/94 (55.32%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 2 QVQQLNKSVWNMNXXXXXXXXXXXAHCVPTSRIENYMPSSAASFLYPTDSSDRKRECLIEGWDIVEHPTLPPPPSQSEDVEHWTRAMFIDAKRK 283 Q QQLNKS+WN + AH +P + N P+S AS+L T+ S RK + GWD+VEHP PPPPSQSEDVEHWTRAMFIDAK+K Sbjct: 176 QAQQLNKSIWNAHSVISSSLLES-AH-LPRNTSYNQDPNSPASYLSATELSTRKNNDM-NGWDLVEHPKYPPPPSQSEDVEHWTRAMFIDAKKK 266
BLAST of EX569539 vs. TrEMBL
Match: D7M8G2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_351968 PE=4 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.263e-19 Identity = 51/94 (54.26%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 2 QVQQLNKSVWNMNXXXXXXXXXXXAHCVPTSRIENYMPSSAASFLYPTDSSDRKRECLIEGWDIVEHPTLPPPPSQSEDVEHWTRAMFIDAKRK 283 Q QLNKS+WN + AH + N P+SAAS+L + SS RK + GWD+VEHP PPPPSQSEDVEHWTRAMFIDAK+K Sbjct: 356 QAPQLNKSIWNAHSVISSSLLES-AHLPERNASYNQDPNSAASYLSASASSTRKNNDM-NGWDLVEHPKYPPPPSQSEDVEHWTRAMFIDAKKK 447
BLAST of EX569539 vs. TrEMBL
Match: O81467_ARATH (T15F16.11 protein OS=Arabidopsis thaliana GN=T15F16.11 PE=4 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.596e-14 Identity = 43/89 (48.31%), Postives = 52/89 (58.43%), Query Frame = 2 Query: 2 QVQQLNKSVWNMNXXXXXXXXXXXAHCVPTSRIENYMPSSAASFLYPTDSSDRKRECLIEGWDIVEHPTLPPPPSQSEDVEHWTRAMFI 268 Q QQLNKS+WN + AH + N P+S AS+L T+ S RK + GWD+VEHP PPPPSQSEDVEHWT M + Sbjct: 99 QAQQLNKSIWNAHSVISSSLLES-AHLPQRNTSYNQDPNSPASYLSATELSTRKNNDM-NGWDLVEHPKYPPPPSQSEDVEHWTHLMTV 185
BLAST of EX569539 vs. TrEMBL
Match: A9TM71_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_223567 PE=4 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.071e-10 Identity = 30/58 (51.72%), Postives = 41/58 (70.69%), Query Frame = 2 Query: 107 YMPSSAASFLYPTDSSDRKRECLIEGWDIVEHPTLPPPPSQSEDVEHWTRAMFIDAKR 280 Y S+ + F+ ++ + ++GW++VEHP LPPPPS SEDVEHWTRAMFIDA + Sbjct: 411 YDVSTESEFM---EAGPNSSDSTVDGWNLVEHPRLPPPPSNSEDVEHWTRAMFIDATK 465
BLAST of EX569539 vs. TrEMBL
Match: C5X2K5_SORBI (Putative uncharacterized protein Sb02g039900 OS=Sorghum bicolor GN=Sb02g039900 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.385e-10 Identity = 37/98 (37.76%), Postives = 52/98 (53.06%), Query Frame = 2 Query: 2 QVQQLNKSVWNMNXXXXXXXXXXXAH--CVPTSRIENYMPSSAASFLYPTD--SSDRKRECLIEGWDIVEHPTLPPPPSQSEDVEHWTRAMFIDAKRK 283 QVQQLN+SVW + + + S ++N + +S SFLY + +++GWD+VE LPPPPSQ EDV W RAM+ K+K Sbjct: 381 QVQQLNRSVWKASSAISSDSSFMDSMHTAIMPSTLDNLLQNSNESFLYTGKLVKHGGVPDSILDGWDLVEREVLPPPPSQVEDVAQWERAMYAGTKKK 478
BLAST of EX569539 vs. TAIR peptide
Match: AT4G08540.1 (| Symbols: | DNA-directed RNA polymerase II protein | chr4:5433760-5436326 FORWARD LENGTH=473) HSP 1 Score: 98.2117 bits (243), Expect = 2.012e-21 Identity = 52/94 (55.32%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 2 QVQQLNKSVWNMNXXXXXXXXXXXAHCVPTSRIENYMPSSAASFLYPTDSSDRKRECLIEGWDIVEHPTLPPPPSQSEDVEHWTRAMFIDAKRK 283 Q QQLNKS+WN + AH +P + N P+S AS+L T+ S RK + GWD+VEHP PPPPSQSEDVEHWTRAMFIDAK+K Sbjct: 383 QAQQLNKSIWNAHSVISSSLLES-AH-LPRNTSYNQDPNSPASYLSATELSTRKNNDM-NGWDLVEHPKYPPPPSQSEDVEHWTRAMFIDAKKK 473 The following BLAST results are available for this feature:
BLAST of EX569539 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of EX569539 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX569539 ID=EX569539; Name=EX569539; organism=Pisum sativum; type=EST; length=453bpback to top |