EX569715

EST Overview
NameEX569715
Unique NameEX569715
TypeEST
OrganismPisum sativum (pea)
Sequence length552
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
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BLAST of EX569715 vs. TrEMBL
Match: D7SRR6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_54.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029432001 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.482e-7
Identity = 33/79 (41.77%), Postives = 42/79 (53.16%), Query Frame = 3 
Query:    6 RNENSDNQNLQPDLRPVVERIDRLSPPADIFRAVAENXXXXXXXXXXXXXXXDELCCNESLASEYL*MLRHDVGQLFEG 242
            R +  D QN Q DLR V E I+R  PP DIFR+VAEN               D LC +E LA+E++ +L+ DV     G
Sbjct:  861 RGDKPDVQNSQTDLREVAESIERQIPPQDIFRSVAENAVQLYANGTGPEGLLDVLCSDEHLATEFMEVLQRDVCNRLHG 939
The following BLAST results are available for this feature:
BLAST of EX569715 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
D7SRR6_VITVI1.482e-741.77Whole genome shotgun sequence of line PN40024, sca... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 39..53
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX569715 ID=EX569715; Name=EX569715; organism=Pisum sativum; type=EST; length=552bp
CCTACAGGAATGAAAATTCTGATAATCAAAACTTACAGCCTGATCTTCGA
CCAGTGGTAGAGAGGATTGATCGCCTGAGTCCACCTGCAGACATCTTCCG
TGCTGTAGCTGAAAATGCTGTCCAGCAGTCTGGCAGTGGAAGTGCTTCCG
ATGATCTTCTGGATGAGTTATGTTGCAATGAAAGTCTTGCCAGTGAATAT
TTGTAGATGTTGCGACATGATGTAGGTCAGTTGTTTGAAGGACGTTCCAA
GAGGGACAAGTCCTAATCCAACTCTTAACCCTCCAGAGAAGTGCTAGAAA
TGAGTTTTGATGTGTTGTGCCCTAAATGATTATCGTTCTGGATCATGACC
TCCGGATCATGCATGAAAATTTATTAATACACATGCCTGAAAGACAGTTG
TTTCTGATGTTCAATGGCCTCCACTGTCATACATTGATGTAATTTTGACT
TGCAGACGGTGGATGCTTTGATCAAATATTCTTGTACATGTTGTGCTTTC
AATGTTTTCATTTATGAATGAATTTATCTTGCTACACTGTGAATGCCTTT
TG
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