EX570090

EST Overview
NameEX570090
Unique NameEX570090
TypeEST
OrganismPisum sativum (pea)
Sequence length535
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of EX570090 vs. TrEMBL
Match: B7FJ83_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 5.223e-52
Identity = 104/112 (92.86%), Postives = 108/112 (96.43%), Query Frame = 1
Query:    1 NQKVEVKSGTRTEEYLLKLDEALEIAGRRLNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKKIPIVMLTSGGYMKSSARVIADSIVNLENKCLIETSGGP 336
            NQKV+VKSGTRTEEYLLKLDEALE+AGRR NPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAR+K IPIVMLTSGGYMKSSARVIADSI+NLE KCLIETSG P
Sbjct:   87 NQKVDVKSGTRTEEYLLKLDEALEVAGRRFNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFARKKNIPIVMLTSGGYMKSSARVIADSILNLEKKCLIETSGDP 198          
BLAST of EX570090 vs. TrEMBL
Match: D7STN3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035364001 PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 7.560e-43
Identity = 86/108 (79.63%), Postives = 98/108 (90.74%), Query Frame = 1
Query:    1 NQKVEVKSGTRTEEYLLKLDEALEIAGRRLNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKKIPIVMLTSGGYMKSSARVIADSIVNLENKCLIET 324
            +QKVEV SGT T EYL KLDEAL++AGR  +PEL+VYNAGTDIL+GDPLGRLKISP+G+  RDEKVFRFAREKKIP++MLTSGGYMKSSA+VIADSIVNL  KCLI+T
Sbjct:  245 DQKVEVVSGTTTNEYLTKLDEALKVAGRMFDPELVVYNAGTDILDGDPLGRLKISPEGVTSRDEKVFRFAREKKIPLIMLTSGGYMKSSAKVIADSIVNLSRKCLIDT 352          
BLAST of EX570090 vs. TrEMBL
Match: D7M4N5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_489451 PE=4 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.071e-39
Identity = 82/108 (75.93%), Postives = 92/108 (85.19%), Query Frame = 1
Query:    1 NQKVEVKSGTRTEEYLLKLDEALEIAGRRLNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKKIPIVMLTSGGYMKSSARVIADSIVNLENKCLIET 324
            +Q +EV SGT T+EYL KLDEALE+A R   PEL++YNAGTDIL+GDPLG LKISPDGI  RDEKVFRFAREK IP+VMLTSGGYMKSSARVIADSI NL  + LI+T
Sbjct:  277 DQNIEVVSGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREKSIPLVMLTSGGYMKSSARVIADSIENLSRQGLIQT 384          
BLAST of EX570090 vs. TrEMBL
Match: Q5Z608_ORYSJ (Os06g0571100 protein OS=Oryza sativa subsp. japonica GN=P0610D01.8 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.293e-38
Identity = 77/107 (71.96%), Postives = 96/107 (89.72%), Query Frame = 1
Query:    1 NQKVEVKSGTRTEEYLLKLDEALEIAGRRLNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKKIPIVMLTSGGYMKSSARVIADSIVNLENKCLIE 321
            +QKVE+ SGT+TE+YL +LD+AL++A  R  P+L+VYNAGTDIL+GDPLGRLKISP G+ +RDEKVFRFA+++ IP++MLTSGGYMKSSARVIADSI+NL NK LIE
Sbjct:  240 DQKVELVSGTKTEDYLDQLDKALKVAESRFQPQLIVYNAGTDILDGDPLGRLKISPQGVVIRDEKVFRFAKDQSIPLLMLTSGGYMKSSARVIADSIINLSNKNLIE 346          
BLAST of EX570090 vs. TrEMBL
Match: B9FTU6_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_21754 PE=4 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.293e-38
Identity = 77/107 (71.96%), Postives = 96/107 (89.72%), Query Frame = 1
Query:    1 NQKVEVKSGTRTEEYLLKLDEALEIAGRRLNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKKIPIVMLTSGGYMKSSARVIADSIVNLENKCLIE 321
            +QKVE+ SGT+TE+YL +LD+AL++A  R  P+L+VYNAGTDIL+GDPLGRLKISP G+ +RDEKVFRFA+++ IP++MLTSGGYMKSSARVIADSI+NL NK LIE
Sbjct:  309 DQKVELVSGTKTEDYLDQLDKALKVAESRFQPQLIVYNAGTDILDGDPLGRLKISPQGVVIRDEKVFRFAKDQSIPLLMLTSGGYMKSSARVIADSIINLSNKNLIE 415          
BLAST of EX570090 vs. TrEMBL
Match: A2YE91_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23434 PE=4 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.293e-38
Identity = 77/107 (71.96%), Postives = 96/107 (89.72%), Query Frame = 1
Query:    1 NQKVEVKSGTRTEEYLLKLDEALEIAGRRLNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKKIPIVMLTSGGYMKSSARVIADSIVNLENKCLIE 321
            +QKVE+ SGT+TE+YL +LD+AL++A  R  P+L+VYNAGTDIL+GDPLGRLKISP G+ +RDEKVFRFA+++ IP++MLTSGGYMKSSARVIADSI+NL NK LIE
Sbjct:  240 DQKVELVSGTKTEDYLDQLDKALKVAESRFQPQLIVYNAGTDILDGDPLGRLKISPQGVVIRDEKVFRFAKDQSIPLLMLTSGGYMKSSARVIADSIINLSNKNLIE 346          
BLAST of EX570090 vs. TrEMBL
Match: B6T7F6_MAIZE (Histone deacetylase 11 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.746e-37
Identity = 74/106 (69.81%), Postives = 94/106 (88.68%), Query Frame = 1
Query:    1 NQKVEVKSGTRTEEYLLKLDEALEIAGRRLNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKKIPIVMLTSGGYMKSSARVIADSIVNLENKCLI 318
            +QKVE+ SG++T+EYL +LD+ALEI   R  P+L+VYNAGTDIL+GDPLGRLK+SP+G+  RD+KVFRFA+++ IP++MLTSGGYMKSSARVIADSI+NL NK LI
Sbjct:  240 DQKVELVSGSKTDEYLEQLDKALEICNSRFEPQLIVYNAGTDILDGDPLGRLKVSPEGVVTRDDKVFRFAKDRNIPLLMLTSGGYMKSSARVIADSIINLSNKNLI 345          
BLAST of EX570090 vs. TrEMBL
Match: C5Z527_SORBI (Putative uncharacterized protein Sb10g022550 OS=Sorghum bicolor GN=Sb10g022550 PE=4 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 8.096e-37
Identity = 74/106 (69.81%), Postives = 92/106 (86.79%), Query Frame = 1
Query:    1 NQKVEVKSGTRTEEYLLKLDEALEIAGRRLNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKKIPIVMLTSGGYMKSSARVIADSIVNLENKCLI 318
            +QKVE+ SGT T+EYL +LD+ALE+   R  P+L+VYNAGTDIL+GDPLGRLK+SP+G+  RDEKVF FA+++ IP++MLTSGGYMKSSARVIADSI+NL NK LI
Sbjct:  238 DQKVELASGTETDEYLEQLDKALEVCNSRFQPQLIVYNAGTDILDGDPLGRLKVSPEGVVTRDEKVFTFAKDQNIPLLMLTSGGYMKSSARVIADSIINLSNKNLI 343          
BLAST of EX570090 vs. TrEMBL
Match: C5XY47_SORBI (Putative uncharacterized protein Sb04g007780 OS=Sorghum bicolor GN=Sb04g007780 PE=4 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.804e-36
Identity = 73/107 (68.22%), Postives = 94/107 (87.85%), Query Frame = 1
Query:    1 NQKVEVKSGTRTEEYLLKLDEALEIAGRRLNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKKIPIVMLTSGGYMKSSARVIADSIVNLENKCLIE 321
            +QK+E+ SGT+TE+YL  LD+AL++A  R  P+L++YNAGTDIL+GDPLG LK+SPDG+  RDEKVFRFA+++ IP++MLTSGGYMKSSARVIADSI+NL NK LI+
Sbjct:  250 DQKIELHSGTKTEDYLEILDKALKVAESRFQPQLILYNAGTDILDGDPLGSLKVSPDGVITRDEKVFRFAKDQSIPLLMLTSGGYMKSSARVIADSIINLSNKNLID 356          
BLAST of EX570090 vs. TrEMBL
Match: D2E427_HORVU (Histone deacetylase family RPD3/HDA1 class III (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 8.951e-36
Identity = 71/112 (63.39%), Postives = 94/112 (83.93%), Query Frame = 1
Query:    1 NQKVEVKSGTRTEEYLLKLDEALEIAGRRLNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKKIPIVMLTSGGYMKSSARVIADSIVNLENKCLIETSGGP 336
            +QK+E+ SGT T++YL +LD+AL++A  R  P+L++YNAGTDIL+GDPLG LKISP+G+ +RDEKVF+FA+++ IP+VM+TSGGYMKSSARVIADSI NL  K LI+    P
Sbjct:  113 DQKIELVSGTETDDYLDQLDKALKVAQTRFQPQLIIYNAGTDILDGDPLGNLKISPEGVVIRDEKVFKFAKDQNIPLVMMTSGGYMKSSARVIADSITNLSQKDLIQLGSQP 224          
BLAST of EX570090 vs. SwissProt
Match: HDA2_ARATH (Histone deacetylase 2 OS=Arabidopsis thaliana GN=HDA2 PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 5.945e-41
Identity = 84/108 (77.78%), Postives = 93/108 (86.11%), Query Frame = 1
Query:    1 NQKVEVKSGTRTEEYLLKLDEALEIAGRRLNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKKIPIVMLTSGGYMKSSARVIADSIVNLENKCLIET 324
            +QKVEV SGT T+EYL KLDEALE+A R   PEL++YNAGTDIL+GDPLG LKISPDGI  RDEKVFRFAREK IP+VMLTSGGYMKSSARVIADSI NL  + LI+T
Sbjct:  277 DQKVEVMSGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREKNIPLVMLTSGGYMKSSARVIADSIENLSRQGLIQT 384          
BLAST of EX570090 vs. SwissProt
Match: HDA11_MACFA (Histone deacetylase 11 OS=Macaca fascicularis GN=HDAC11 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 2.964e-24
Identity = 56/99 (56.57%), Postives = 75/99 (75.76%), Query Frame = 1
Query:    4 QKVEVKSGTRTEEYLLKLDEALEIAGRRLNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKKIPIVMLTSGGYMKSSARVIADSIVNL 300
            +KVE++ GT  +EYL K++  +E + +   P+++VYNAGTDILEGD LG L ISP GI  RDE VFR  R + +PI+M+TSGGY K +AR+IADSI+NL
Sbjct:  221 RKVELEWGTEDDEYLDKVERNIEKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRHVPILMVTSGGYQKRTARIIADSILNL 319          
BLAST of EX570090 vs. SwissProt
Match: HDA11_MOUSE (Histone deacetylase 11 OS=Mus musculus GN=Hdac11 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.872e-24
Identity = 58/105 (55.24%), Postives = 76/105 (72.38%), Query Frame = 1
Query:    4 QKVEVKSGTRTEEYLLKLDEALEIAGRRLNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKKIPIVMLTSGGYMKSSARVIADSIVNLENKCLI 318
            +KVE++ GT  EEYL K++  +  + +   P+++VYNAGTD+LEGD LG L ISP GI  RDE VFR  R   IPI+M+TSGGY K +AR+IADSI+NL +  LI
Sbjct:  221 RKVELEWGTEDEEYLEKVERNVRRSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFRVVRAHDIPILMVTSGGYQKRTARIIADSILNLHDLGLI 325          
BLAST of EX570090 vs. SwissProt
Match: HDA11_HUMAN (Histone deacetylase 11 OS=Homo sapiens GN=HDAC11 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.872e-24
Identity = 55/99 (55.56%), Postives = 76/99 (76.77%), Query Frame = 1
Query:    4 QKVEVKSGTRTEEYLLKLDEALEIAGRRLNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKKIPIVMLTSGGYMKSSARVIADSIVNL 300
            +KVE++ GT  +EYL K++  ++ + +   P+++VYNAGTDILEGD LG L ISP GI  RDE VFR  R +++PI+M+TSGGY K +AR+IADSI+NL
Sbjct:  221 RKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNL 319          
BLAST of EX570090 vs. TAIR peptide
Match: AT5G26040.2 (| Symbols: HDA2 | histone deacetylase 2 | chr5:9099321-9101598 REVERSE LENGTH=387)

HSP 1 Score: 166.777 bits (421), Expect = 6.495e-42
Identity = 84/108 (77.78%), Postives = 93/108 (86.11%), Query Frame = 1
Query:    1 NQKVEVKSGTRTEEYLLKLDEALEIAGRRLNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKKIPIVMLTSGGYMKSSARVIADSIVNLENKCLIET 324
            +QKVEV SGT T+EYL KLDEALE+A R   PEL++YNAGTDIL+GDPLG LKISPDGI  RDEKVFRFAREK IP+VMLTSGGYMKSSARVIADSI NL  + LI+T
Sbjct:  277 DQKVEVMSGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREKNIPLVMLTSGGYMKSSARVIADSIENLSRQGLIQT 384          
BLAST of EX570090 vs. TAIR peptide
Match: AT5G26040.1 (| Symbols: HDA2 | histone deacetylase 2 | chr5:9099321-9101598 REVERSE LENGTH=359)

HSP 1 Score: 166.777 bits (421), Expect = 6.495e-42
Identity = 84/108 (77.78%), Postives = 93/108 (86.11%), Query Frame = 1
Query:    1 NQKVEVKSGTRTEEYLLKLDEALEIAGRRLNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKKIPIVMLTSGGYMKSSARVIADSIVNLENKCLIET 324
            +QKVEV SGT T+EYL KLDEALE+A R   PEL++YNAGTDIL+GDPLG LKISPDGI  RDEKVFRFAREK IP+VMLTSGGYMKSSARVIADSI NL  + LI+T
Sbjct:  249 DQKVEVMSGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREKNIPLVMLTSGGYMKSSARVIADSIENLSRQGLIQT 356          
The following BLAST results are available for this feature:
BLAST of EX570090 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FJ83_MEDTR5.223e-5292.86Putative uncharacterized protein OS=Medicago trunc... [more]
D7STN3_VITVI7.560e-4379.63Whole genome shotgun sequence of line PN40024, sca... [more]
D7M4N5_ARALY5.071e-3975.93Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q5Z608_ORYSJ4.293e-3871.96Os06g0571100 protein OS=Oryza sativa subsp. japoni... [more]
B9FTU6_ORYSJ4.293e-3871.96Putative uncharacterized protein OS=Oryza sativa s... [more]
A2YE91_ORYSI4.293e-3871.96Putative uncharacterized protein OS=Oryza sativa s... [more]
B6T7F6_MAIZE4.746e-3769.81Histone deacetylase 11 OS=Zea mays PE=2 SV=1[more]
C5Z527_SORBI8.096e-3769.81Putative uncharacterized protein Sb10g022550 OS=So... [more]
C5XY47_SORBI1.804e-3668.22Putative uncharacterized protein Sb04g007780 OS=So... [more]
D2E427_HORVU8.951e-3663.39Histone deacetylase family RPD3/HDA1 class III (Fr... [more]
back to top
BLAST of EX570090 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
HDA2_ARATH5.945e-4177.78Histone deacetylase 2 OS=Arabidopsis thaliana GN=H... [more]
HDA11_MACFA2.964e-2456.57Histone deacetylase 11 OS=Macaca fascicularis GN=H... [more]
HDA11_MOUSE3.872e-2455.24Histone deacetylase 11 OS=Mus musculus GN=Hdac11 P... [more]
HDA11_HUMAN3.872e-2455.56Histone deacetylase 11 OS=Homo sapiens GN=HDAC11 P... [more]
back to top
BLAST of EX570090 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G26040.26.495e-4277.78| Symbols: HDA2 | histone deacetylase 2 | chr5:909... [more]
AT5G26040.16.495e-4277.78| Symbols: HDA2 | histone deacetylase 2 | chr5:909... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000286Histone deacetylase superfamilyGENE3D3.40.800.20no descriptioncoord: 4..99
score: 2.7
IPR000286Histone deacetylase superfamilyPANTHERPTHR10625HISTONE DEACETYLASEcoord: 1..111
score: 6
IPR000286Histone deacetylase superfamilyPFAMPF00850Hist_deacetylcoord: 3..99
score: 1.8
NoneNo IPR availablePANTHERPTHR10625:SF9HISTONE DEACETYLASE 11coord: 1..111
score: 6
NoneNo IPR availableSUPERFAMILY52768Arginase/deacetylasecoord: 1..102
score: 3.8
NoneNo IPR availableSEGsegsegcoord: 15..24
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570090 ID=EX570090; Name=EX570090; organism=Pisum sativum; type=EST; length=535bp
AATCAGAAAGTTGAAGTGAAGAGCGGGACTCGTACAGAAGAGTACCTGCT
AAAATTAGATGAAGCACTTGAGATTGCTGGGCGAAGGCTTAACCCTGAGT
TGTTAGTTTATAATGCTGGAACTGACATCCTAGAAGGTGACCCATTAGGA
AGGTTGAAGATTAGTCCTGACGGAATTGCTCTTAGAGATGAGAAAGTTTT
TCGGTTTGCTCGTGAAAAGAAAATTCCCATTGTCATGCTCACTTCAGGCG
GATACATGAAGTCCAGTGCTAGAGTCATTGCAGACTCAATAGTCAATCTC
GAGAACAAATGCTTGATAGAAACGAGTGGAGGTCCATAGGCTGCATAACA
GTGATCTTGCACTTACACGTTAAGAGGTTTTTGTGTGATTTACCGACCCT
GAAAAATGGTCCGCTGTAAAATGTTCATATATCAATGGAAACTTCAATGT
ATAGTTTTCCATAAAGAAAAGGAAAAAAAGGAAAGATGAAAAACATGTTT
TACATGTATGAGTTGTAACATGTATGTAAATGCGA
back to top
Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR000286His_deacetylse