FG528892

EST Overview
NameFG528892
Unique NameFG528892
TypeEST
OrganismPisum sativum (pea)
Sequence length446
Libraries
Library NameType
LIBEST_023214 MeriC Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG528892 vs. TrEMBL
Match: Q9SMK3_CICAR (Putative uncharacterized protein (Fragment) OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.100e-22
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = -2
Query:   11 IMEQNKEKNTPWLSVPQFGEWDQKGPLPDYSMDFSKIREMRKQNKTNASRASL 169
            IM+QNKEKN PWLSVPQFGEWDQKGPLPDYS+DFSKIREMRKQNKTN SRASL
Sbjct:    5 IMDQNKEKNAPWLSVPQFGEWDQKGPLPDYSLDFSKIREMRKQNKTNTSRASL 57          
BLAST of FG528892 vs. TrEMBL
Match: C6TMG6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.841e-19
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = -2
Query:   11 MEQNKEKNTPWLSVPQFGEWDQKGPLPDYSMDFSKIREMRKQNKTNASRASL 166
            MEQ+KEKN PWLSVPQFG+WDQKG + DYS+DFSKIREMRKQNKTN SRASL
Sbjct:    1 MEQSKEKNAPWLSVPQFGDWDQKGQVSDYSLDFSKIREMRKQNKTNISRASL 52          
BLAST of FG528892 vs. TrEMBL
Match: C6SVC2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.322e-19
Identity = 44/52 (84.62%), Postives = 47/52 (90.38%), Query Frame = -2
Query:   11 MEQNKEKNTPWLSVPQFGEWDQKGPLPDYSMDFSKIREMRKQNKTNASRASL 166
            MEQNKEKN PWLSVPQFG+WDQK  +PDYS+DFSKIRE RKQNKTN SRASL
Sbjct:    1 MEQNKEKNAPWLSVPQFGDWDQKEQVPDYSLDFSKIRETRKQNKTNISRASL 52          
BLAST of FG528892 vs. TrEMBL
Match: C6SXU9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.098e-18
Identity = 42/52 (80.77%), Postives = 47/52 (90.38%), Query Frame = -2
Query:   11 MEQNKEKNTPWLSVPQFGEWDQKGPLPDYSMDFSKIREMRKQNKTNASRASL 166
            M++ KEKN PWLSVPQFG+WDQKG +PDYS+DFSKIRE RKQNKTN SRASL
Sbjct:    1 MDRRKEKNGPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKTNISRASL 52          
BLAST of FG528892 vs. TrEMBL
Match: D7SW64_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_31.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022234001 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.469e-17
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = -2
Query:   11 MEQNKEKNTPWLSVPQFGEWDQKGPLPDYSMDFSKIREMRKQNKTNASRASL 166
            ME  KEK  PWLSVPQFG+WDQKG +PDYS+DFSKIREMRKQNK + SRASL
Sbjct:    1 MEDRKEKAAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASL 52          
BLAST of FG528892 vs. TrEMBL
Match: A9PBR9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_818318 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.531e-17
Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = -2
Query:   11 MEQNKE-KNTPWLSVPQFGEWDQKGPLPDYSMDFSKIREMRKQNKTNASRASL 166
            ME  K+ KN PWLSVPQFG+WDQKG LPDYS+DFSKIREMRKQNK +ASRASL
Sbjct:    1 MEDRKDQKNAPWLSVPQFGDWDQKGELPDYSVDFSKIREMRKQNKRDASRASL 53          
BLAST of FG528892 vs. TrEMBL
Match: B9HG23_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_832289 PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.009e-16
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = -2
Query:   11 MEQNKE-KNTPWLSVPQFGEWDQKGPLPDYSMDFSKIREMRKQNKTNASRASL 166
            ME  K+ KN PWLSVPQFG+WDQKG LPDYS+DFSKIREMRKQNK + SRASL
Sbjct:    1 MEDRKDQKNAPWLSVPQFGDWDQKGELPDYSLDFSKIREMRKQNKKDVSRASL 53          
BLAST of FG528892 vs. TrEMBL
Match: Q8LF39_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.937e-16
Identity = 41/53 (77.36%), Postives = 46/53 (86.79%), Query Frame = -2
Query:   11 EQNKEKNTPWLSVPQFGEWDQKG--PLPDYSMDFSKIREMRKQNKTNASRASL 163
            +  KEKNTPWLSVPQFG+WDQKG   +PDYSMDF+KIREMRKQNK + SRASL
Sbjct:    3 DDRKEKNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASL 55          
BLAST of FG528892 vs. TrEMBL
Match: Q67XU1_ARATH (At5g09960 OS=Arabidopsis thaliana GN=At5g09960 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.937e-16
Identity = 41/53 (77.36%), Postives = 46/53 (86.79%), Query Frame = -2
Query:   11 EQNKEKNTPWLSVPQFGEWDQKG--PLPDYSMDFSKIREMRKQNKTNASRASL 163
            +  KEKNTPWLSVPQFG+WDQKG   +PDYSMDF+KIREMRKQNK + SRASL
Sbjct:    3 DDRKEKNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASL 55          
BLAST of FG528892 vs. TrEMBL
Match: B7U9U8_CARAS (AT5G09960-like protein OS=Cardaminopsis arenosa PE=4 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.937e-16
Identity = 41/53 (77.36%), Postives = 46/53 (86.79%), Query Frame = -2
Query:   11 EQNKEKNTPWLSVPQFGEWDQKG--PLPDYSMDFSKIREMRKQNKTNASRASL 163
            +  KEKNTPWLSVPQFG+WDQKG   +PDYSMDF+KIREMRKQNK + SRASL
Sbjct:    3 DDRKEKNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASL 55          
BLAST of FG528892 vs. TAIR peptide
Match: AT5G09960.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:3106503-3107658 FORWARD LENGTH=112)

HSP 1 Score: 88.1965 bits (217), Expect = 2.011e-18
Identity = 41/53 (77.36%), Postives = 46/53 (86.79%), Query Frame = -2
Query:   11 EQNKEKNTPWLSVPQFGEWDQKG--PLPDYSMDFSKIREMRKQNKTNASRASL 163
            +  KEKNTPWLSVPQFG+WDQKG   +PDYSMDF+KIREMRKQNK + SRASL
Sbjct:    3 DDRKEKNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASL 55          
BLAST of FG528892 vs. TAIR peptide
Match: AT5G64850.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:25921585-25923038 FORWARD LENGTH=114)

HSP 1 Score: 84.7297 bits (208), Expect = 2.224e-17
Identity = 42/53 (79.25%), Postives = 45/53 (84.91%), Query Frame = -2
Query:   11 MEQNKE-KNTPWLSVPQFGEWDQKGPLPDYSMDFSKIREMRKQNKTNASRASL 166
            ME  KE KN+PWLSVPQFG+WDQKG   DYSMDFSKIREMRK NK +ASRASL
Sbjct:    1 MEDRKENKNSPWLSVPQFGDWDQKGGSIDYSMDFSKIREMRKLNKRDASRASL 53          
BLAST of FG528892 vs. TAIR peptide
Match: AT5G19473.1 (| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr5:6569268-6570680 FORWARD LENGTH=99)

HSP 1 Score: 53.9138 bits (128), Expect = 4.204e-8
Identity = 26/50 (52.00%), Postives = 31/50 (62.00%), Query Frame = -2
Query:   11 KEKNTPWLSVPQFGEWDQKGP--LPDYSMDFSKIREMRKQNKTNASRASL 154
            + +N  W  VPQFG WDQKGP    +YS+ FSK R  RKQNK     +SL
Sbjct:    4 RRENAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGVRHSSL 53          
The following BLAST results are available for this feature:
BLAST of FG528892 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q9SMK3_CICAR2.100e-2292.45Putative uncharacterized protein (Fragment) OS=Cic... [more]
C6TMG6_SOYBN4.841e-1984.62Putative uncharacterized protein OS=Glycine max PE... [more]
C6SVC2_SOYBN6.322e-1984.62Putative uncharacterized protein OS=Glycine max PE... [more]
C6SXU9_SOYBN4.098e-1880.77Putative uncharacterized protein OS=Glycine max PE... [more]
D7SW64_VITVI3.469e-1778.85Whole genome shotgun sequence of line PN40024, sca... [more]
A9PBR9_POPTR4.531e-1781.13Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HG23_POPTR1.009e-1679.25Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q8LF39_ARATH2.937e-1677.36Putative uncharacterized protein OS=Arabidopsis th... [more]
Q67XU1_ARATH2.937e-1677.36At5g09960 OS=Arabidopsis thaliana GN=At5g09960 PE=... [more]
B7U9U8_CARAS2.937e-1677.36AT5G09960-like protein OS=Cardaminopsis arenosa PE... [more]
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BLAST of FG528892 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G09960.12.011e-1877.36| Symbols: | FUNCTIONS IN: molecular_function unk... [more]
AT5G64850.12.224e-1779.25| Symbols: | FUNCTIONS IN: molecular_function unk... [more]
AT5G19473.14.204e-852.00| Symbols: | RPM1-interacting protein 4 (RIN4) fa... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 45..54
score
NoneNo IPR availableSEGsegsegcoord: 1..7
score
IPR008700RPM1-interacting protein 4, defence responsePFAMPF05627AvrRpt-cleavagecoord: 44..73
score: 4.1

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG528892 ID=FG528892; Name=FG528892; organism=Pisum sativum; type=EST; length=446bp
AAAACAGAACAAGACTTGCTCTTGACGCATTAGTCTTGTTCTGTTTTCGC
ATTTCTCGGATTTTAGAAAAATCCATAGAGTAATCTGGCAATGGACCCTT
CTGATCCCATTCTCCAAACTGTGGTACTGATAGCCAAGGGGTATTTTTCT
CCTTATTTTGCTCCATGATAGAGTTTTCAGATTTTTTGAGAAGAAAAGTT
ATAGAATTATGTAGGCACAAGTGTTTCAGCGTCAAGGAGGAGCTTCTTGA
GCTACTTCAACTGTTGCATAAAAGCTTGAGATTCAAGGGTTCCACATTTC
TTGAGTCTTCTAAATATTGTTGATTATTAGAATTATGCATTTTTTCTTGG
TTATATTAATCTTGCCTAGTTTTTTAGAAAAACAATTACAATCTCTTTTG
TGTCTTCTAAAGATAATTGATCGGTACAATTATGCTTTTGCGCTTG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR008700TypeIII_avirulence_cleave