FG529969

EST Overview
NameFG529969
Unique NameFG529969
TypeEST
OrganismPisum sativum (pea)
Sequence length537
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG529969 vs. TrEMBL
Match: A5AN42_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043189 PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.121e-17
Identity = 57/125 (45.60%), Postives = 68/125 (54.40%), Query Frame = 1
Query:  196 RVEDDLPEYNFSSSSNPSVLV----KKPMGPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFR--GSI-QPW-NDDDDDIPEWQPNMNQNQFTPQQ---TVHNFHPRP 537
            R EDDLPE+ FS  SN S         P GP +AP             P RP +QMR+L+ KYGQ+    SS NW+DK R  G + QPW +DDDDDIPEWQP   Q Q  P Q    V+ F  +P
Sbjct:  842 RDEDDLPEFQFSGGSNSSTAPFSARTTPGGPGVAPFNQPP------HNPPRPVEQMRQLIQKYGQSGAQPSSGNWRDKGRIIGHVTQPWADDDDDDIPEWQPQAPQQQLHPPQPTPPVYGFQAQP 960          
BLAST of FG529969 vs. TrEMBL
Match: B9T1M3_RICCO (Transcription elongation factor s-II, putative OS=Ricinus communis GN=RCOM_0122480 PE=4 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.492e-17
Identity = 49/108 (45.37%), Postives = 61/108 (56.48%), Query Frame = 1
Query:  205 DDLPEYNFSSSSNPSVLVKKPMGPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDK--FRGSIQPWNDDDDDIPEWQPNMNQNQFTPQQTVHN 522
            DDLPE+NFSS S  +   +     S+             Q  SRP  QMRELVH+YGQ  T  SS NWQDK  F   +QPW+DDDDD+PEW+P  N+    P+   H+
Sbjct:  908 DDLPEFNFSSGS-VTPRSQTSTTQSVIQGQGMSHFHQHSQAHSRPVDQMRELVHRYGQPKTSTSSGNWQDKRGFGVVVQPWDDDDDDMPEWRPEDNKQVPHPRPHTHS 1014          
BLAST of FG529969 vs. TrEMBL
Match: D7SUI4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035723001 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.160e-12
Identity = 49/123 (39.84%), Postives = 60/123 (48.78%), Query Frame = 1
Query:  196 RVEDDLPEYNFSSSSNPSVLV----KKPMGPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSI-QPW-NDDDDDIPEWQPNMNQNQFTPQQ---TVHNFHPRP 537
            R EDDLPE+ FS  SN S         P GP +AP               RP +QMR+L+ KYGQ+           +  G + QPW +DDDDDIPEWQP   Q Q  P Q    V+ F  +P
Sbjct:  893 RDEDDLPEFQFSGGSNSSTAPFSARTTPGGPGVAPFNQPP------HNSPRPVEQMRQLIQKYGQS-----------RIIGHVTQPWADDDDDDIPEWQPQAPQQQLQPPQPTPPVYGFQAQP 998          
BLAST of FG529969 vs. TrEMBL
Match: A9PF75_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.328e-10
Identity = 49/114 (42.98%), Postives = 55/114 (48.25%), Query Frame = 1
Query:  196 RVEDDLPEYNFSSSSNPSVLVKKPMGPS----MAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSIQPWNDDDDD--IPEWQPNMNQNQFTPQQTVH 519
            R EDDLPE+NFSS S  S        P+    MAP           Q PS P   +RELVH+YGQ  T V  V          QPWNDDDDD  +PEW P     Q T  Q +H
Sbjct:  108 RDEDDLPEFNFSSGSIASRSEFSNQNPTRRQGMAPHNSYP------QIPSHPLD-LRELVHRYGQPKTDVLPV----------QPWNDDDDDDDMPEWHPEETPKQRTHPQPMH 204          
BLAST of FG529969 vs. TrEMBL
Match: Q6H8E1_ORYSJ (PHD finger protein-like OS=Oryza sativa subsp. japonica GN=OJ1006_A02.15 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.957e-10
Identity = 46/109 (42.20%), Postives = 54/109 (49.54%), Query Frame = 1
Query:  196 RVEDDLPEYNFSSSSNPSVLVKKPM---GPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSIQ--PWNDDDDD-IPEWQPNMNQNQFTP 504
            R EDDLPE+NF +SSNP+  V       G    P            T +RP +QMRELV KYG+              R S+Q  PW+DDDDD IPEW PN    Q  P
Sbjct:  899 RDEDDLPEFNFVNSSNPAANVTTTQAYKGRQHVPL-----------TSARPVEQMRELVQKYGK--------------RSSVQARPWDDDDDDDIPEWNPNQLVTQQQP 982          
BLAST of FG529969 vs. TrEMBL
Match: B8ADW3_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06323 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.957e-10
Identity = 46/109 (42.20%), Postives = 54/109 (49.54%), Query Frame = 1
Query:  196 RVEDDLPEYNFSSSSNPSVLVKKPM---GPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSIQ--PWNDDDDD-IPEWQPNMNQNQFTP 504
            R EDDLPE+NF +SSNP+  V       G    P            T +RP +QMRELV KYG+              R S+Q  PW+DDDDD IPEW PN    Q  P
Sbjct:  574 RDEDDLPEFNFVNSSNPAANVTTTQAYKGRQHVPL-----------TSARPVEQMRELVQKYGK--------------RSSVQARPWDDDDDDDIPEWNPNQLVTQQQP 657          
BLAST of FG529969 vs. TrEMBL
Match: C5XXZ4_SORBI (Putative uncharacterized protein Sb04g007300 OS=Sorghum bicolor GN=Sb04g007300 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.468e-9
Identity = 44/106 (41.51%), Postives = 56/106 (52.83%), Query Frame = 1
Query:  196 RVEDDLPEYNFSSSSNPSVLVKKPM---GPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSIQPWNDDDDDIPEWQPNMNQNQFTP 504
            R EDDLPE+NF +SS+ +  V        P +AP              +RPA+QMRELV KYG+     SSV        + + W+DDDDDIPEW P+   NQ  P
Sbjct:  893 RDEDDLPEFNFVNSSHHAANVTAHAYKGRPHVAPPS------------ARPAEQMRELVQKYGKR----SSVQ-------APRSWDDDDDDIPEWNPSQTINQPPP 975          
BLAST of FG529969 vs. TrEMBL
Match: D7M401_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_489410 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 4.722e-8
Identity = 42/119 (35.29%), Postives = 52/119 (43.70%), Query Frame = 1
Query:  202 EDDLPEYNFSSSSNPSVLVKKPMGPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSIQPWN----DDDDDIPEWQPNMNQNQF----TPQQTVHNFHPR 534
            +DDLPE+NFSSSS P     +P                     SR   Q+REL+ KYG +              GS +PW+    DDDDDIPEWQP +  +Q      P      FH R
Sbjct:  899 DDDLPEFNFSSSSGPVTSFPQP------------------PPQSRSMDQVRELILKYGNSAGS-----------GSKRPWDGHEDDDDDDIPEWQPQVTGHQVQLPPPPPDLSPQFHSR 988          
BLAST of FG529969 vs. TrEMBL
Match: Q3E7G3_ARATH (Putative uncharacterized protein At5g25520.2 OS=Arabidopsis thaliana GN=At5g25520 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.997e-7
Identity = 36/98 (36.73%), Postives = 46/98 (46.94%), Query Frame = 1
Query:  202 EDDLPEYNFSSSSNPSVLVKKPMGPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSIQPWN----DDDDDIPEWQPNM 483
            +DDLPE+NF+SSS P     +P                     SR   Q+REL+ KYG +              GS +PW+    DDDDDIPEWQP +
Sbjct:  877 DDDLPEFNFNSSSGPVTSSPRP------------------PLQSRSLDQVRELILKYGNSTGS-----------GSKRPWDGHDDDDDDDIPEWQPQL 945          
BLAST of FG529969 vs. TAIR peptide
Match: AT5G25520.2 (| Symbols: | SPOC domain / Transcription elongation factor S-II protein | chr5:8885550-8889484 FORWARD LENGTH=997)

HSP 1 Score: 58.151 bits (139), Expect = 3.292e-9
Identity = 36/98 (36.73%), Postives = 46/98 (46.94%), Query Frame = 1
Query:  202 EDDLPEYNFSSSSNPSVLVKKPMGPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSIQPWN----DDDDDIPEWQPNM 483
            +DDLPE+NF+SSS P     +P                     SR   Q+REL+ KYG +              GS +PW+    DDDDDIPEWQP +
Sbjct:  877 DDDLPEFNFNSSSGPVTSSPRP------------------PLQSRSLDQVRELILKYGNSTGS-----------GSKRPWDGHDDDDDDDIPEWQPQL 945          
BLAST of FG529969 vs. TAIR peptide
Match: AT5G11430.1 (| Symbols: | SPOC domain / Transcription elongation factor S-II protein | chr5:3648469-3652256 FORWARD LENGTH=873)

HSP 1 Score: 55.0694 bits (131), Expect = 2.787e-8
Identity = 34/103 (33.01%), Postives = 48/103 (46.60%), Query Frame = 1
Query:  196 RVEDDLPEYNFSSSSNPSVLVKKPMGPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSIQPWNDDDDDIPEWQPNMNQNQFTP 504
            R EDDLPE+NF+SS  P         P   P              S+   Q+R+L+HKYG++ +                  +DD+DDIPEWQP++  +Q  P
Sbjct:  761 RDEDDLPEFNFNSSVVPV------SSPQPLP------------AQSKSLDQVRKLIHKYGKSASTYDD--------------DDDEDDIPEWQPHVPSHQLPP 831          
The following BLAST results are available for this feature:
BLAST of FG529969 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 9
Match NameE-valueIdentityDescription
A5AN42_VITVI1.121e-1745.60Putative uncharacterized protein OS=Vitis vinifera... [more]
B9T1M3_RICCO9.492e-1745.37Transcription elongation factor s-II, putative OS=... [more]
D7SUI4_VITVI3.160e-1239.84Whole genome shotgun sequence of line PN40024, sca... [more]
A9PF75_POPTR1.328e-1042.98Putative uncharacterized protein OS=Populus tricho... [more]
Q6H8E1_ORYSJ2.957e-1042.20PHD finger protein-like OS=Oryza sativa subsp. jap... [more]
B8ADW3_ORYSI2.957e-1042.20Putative uncharacterized protein OS=Oryza sativa s... [more]
C5XXZ4_SORBI1.468e-941.51Putative uncharacterized protein Sb04g007300 OS=So... [more]
D7M401_ARALY4.722e-835.29Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q3E7G3_ARATH3.997e-736.73Putative uncharacterized protein At5g25520.2 OS=Ar... [more]
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BLAST of FG529969 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G25520.23.292e-936.73| Symbols: | SPOC domain / Transcription elongati... [more]
AT5G11430.12.787e-833.01| Symbols: | SPOC domain / Transcription elongati... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 24..45
score: NAcoord: 77..86
score
NoneNo IPR availableSEGsegsegcoord: 22..38
score
NoneNo IPR availableSEGsegsegcoord: 22..36
score: NAcoord: 60..78
score
NoneNo IPR availableSEGsegsegcoord: 25..57
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG529969 ID=FG529969; Name=FG529969; organism=Pisum sativum; type=EST; length=537bp
AACACACAACAAACATAGCTCTAAAAGGCAAAACTTGAGTAGAAGACAGC
ATGATACTAATTGAATGCCAATGCCAAATCTACCCATAATGCAGTACCCT
CTACGGGGTTTAAGACCACCGAGAGTGAACCTCCGGATGCAGATGGGGAT
GATGATGACGATGACGTTCCTCCTGGATTTGGGCCACCAGTAGGCCGAGT
AGAGGATGACCTCCCTGAGTATAATTTTTCCAGTAGTTCAAATCCATCCG
TCTTGGTTAAAAAACCTATGGGACCAAGTATGGCCCCGTCTCACTCGGTT
GTTCAGTCTCACTCGGTTGGTCAAACCCCTTCCCGTCCTGCACAGCAAAT
GAGAGAACTTGTACACAAATATGGGCAAAACGTAACACCTGTATCTTCAG
TAAATTGGCAGGACAAATTTAGGGGGTCAATTCAACCCTGGAATGATGAC
GACGACGATATACCTGAATGGCAACCTAATATGAACCAGAACCAGTTTAC
TCCCCAACAGACAGTGCATAATTTTCATCCTAGACCT
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