FG529969
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG529969 vs. TrEMBL
Match: A5AN42_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043189 PE=4 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.121e-17 Identity = 57/125 (45.60%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 196 RVEDDLPEYNFSSSSNPSVLV----KKPMGPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFR--GSI-QPW-NDDDDDIPEWQPNMNQNQFTPQQ---TVHNFHPRP 537 R EDDLPE+ FS SN S P GP +AP P RP +QMR+L+ KYGQ+ SS NW+DK R G + QPW +DDDDDIPEWQP Q Q P Q V+ F +P Sbjct: 842 RDEDDLPEFQFSGGSNSSTAPFSARTTPGGPGVAPFNQPP------HNPPRPVEQMRQLIQKYGQSGAQPSSGNWRDKGRIIGHVTQPWADDDDDDIPEWQPQAPQQQLHPPQPTPPVYGFQAQP 960
BLAST of FG529969 vs. TrEMBL
Match: B9T1M3_RICCO (Transcription elongation factor s-II, putative OS=Ricinus communis GN=RCOM_0122480 PE=4 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.492e-17 Identity = 49/108 (45.37%), Postives = 61/108 (56.48%), Query Frame = 1 Query: 205 DDLPEYNFSSSSNPSVLVKKPMGPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDK--FRGSIQPWNDDDDDIPEWQPNMNQNQFTPQQTVHN 522 DDLPE+NFSS S + + S+ Q SRP QMRELVH+YGQ T SS NWQDK F +QPW+DDDDD+PEW+P N+ P+ H+ Sbjct: 908 DDLPEFNFSSGS-VTPRSQTSTTQSVIQGQGMSHFHQHSQAHSRPVDQMRELVHRYGQPKTSTSSGNWQDKRGFGVVVQPWDDDDDDMPEWRPEDNKQVPHPRPHTHS 1014
BLAST of FG529969 vs. TrEMBL
Match: D7SUI4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035723001 PE=4 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.160e-12 Identity = 49/123 (39.84%), Postives = 60/123 (48.78%), Query Frame = 1 Query: 196 RVEDDLPEYNFSSSSNPSVLV----KKPMGPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSI-QPW-NDDDDDIPEWQPNMNQNQFTPQQ---TVHNFHPRP 537 R EDDLPE+ FS SN S P GP +AP RP +QMR+L+ KYGQ+ + G + QPW +DDDDDIPEWQP Q Q P Q V+ F +P Sbjct: 893 RDEDDLPEFQFSGGSNSSTAPFSARTTPGGPGVAPFNQPP------HNSPRPVEQMRQLIQKYGQS-----------RIIGHVTQPWADDDDDDIPEWQPQAPQQQLQPPQPTPPVYGFQAQP 998
BLAST of FG529969 vs. TrEMBL
Match: A9PF75_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.328e-10 Identity = 49/114 (42.98%), Postives = 55/114 (48.25%), Query Frame = 1 Query: 196 RVEDDLPEYNFSSSSNPSVLVKKPMGPS----MAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSIQPWNDDDDD--IPEWQPNMNQNQFTPQQTVH 519 R EDDLPE+NFSS S S P+ MAP Q PS P +RELVH+YGQ T V V QPWNDDDDD +PEW P Q T Q +H Sbjct: 108 RDEDDLPEFNFSSGSIASRSEFSNQNPTRRQGMAPHNSYP------QIPSHPLD-LRELVHRYGQPKTDVLPV----------QPWNDDDDDDDMPEWHPEETPKQRTHPQPMH 204
BLAST of FG529969 vs. TrEMBL
Match: Q6H8E1_ORYSJ (PHD finger protein-like OS=Oryza sativa subsp. japonica GN=OJ1006_A02.15 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.957e-10 Identity = 46/109 (42.20%), Postives = 54/109 (49.54%), Query Frame = 1 Query: 196 RVEDDLPEYNFSSSSNPSVLVKKPM---GPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSIQ--PWNDDDDD-IPEWQPNMNQNQFTP 504 R EDDLPE+NF +SSNP+ V G P T +RP +QMRELV KYG+ R S+Q PW+DDDDD IPEW PN Q P Sbjct: 899 RDEDDLPEFNFVNSSNPAANVTTTQAYKGRQHVPL-----------TSARPVEQMRELVQKYGK--------------RSSVQARPWDDDDDDDIPEWNPNQLVTQQQP 982
BLAST of FG529969 vs. TrEMBL
Match: B8ADW3_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06323 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.957e-10 Identity = 46/109 (42.20%), Postives = 54/109 (49.54%), Query Frame = 1 Query: 196 RVEDDLPEYNFSSSSNPSVLVKKPM---GPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSIQ--PWNDDDDD-IPEWQPNMNQNQFTP 504 R EDDLPE+NF +SSNP+ V G P T +RP +QMRELV KYG+ R S+Q PW+DDDDD IPEW PN Q P Sbjct: 574 RDEDDLPEFNFVNSSNPAANVTTTQAYKGRQHVPL-----------TSARPVEQMRELVQKYGK--------------RSSVQARPWDDDDDDDIPEWNPNQLVTQQQP 657
BLAST of FG529969 vs. TrEMBL
Match: C5XXZ4_SORBI (Putative uncharacterized protein Sb04g007300 OS=Sorghum bicolor GN=Sb04g007300 PE=4 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.468e-9 Identity = 44/106 (41.51%), Postives = 56/106 (52.83%), Query Frame = 1 Query: 196 RVEDDLPEYNFSSSSNPSVLVKKPM---GPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSIQPWNDDDDDIPEWQPNMNQNQFTP 504 R EDDLPE+NF +SS+ + V P +AP +RPA+QMRELV KYG+ SSV + + W+DDDDDIPEW P+ NQ P Sbjct: 893 RDEDDLPEFNFVNSSHHAANVTAHAYKGRPHVAPPS------------ARPAEQMRELVQKYGKR----SSVQ-------APRSWDDDDDDIPEWNPSQTINQPPP 975
BLAST of FG529969 vs. TrEMBL
Match: D7M401_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_489410 PE=4 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 4.722e-8 Identity = 42/119 (35.29%), Postives = 52/119 (43.70%), Query Frame = 1 Query: 202 EDDLPEYNFSSSSNPSVLVKKPMGPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSIQPWN----DDDDDIPEWQPNMNQNQF----TPQQTVHNFHPR 534 +DDLPE+NFSSSS P +P SR Q+REL+ KYG + GS +PW+ DDDDDIPEWQP + +Q P FH R Sbjct: 899 DDDLPEFNFSSSSGPVTSFPQP------------------PPQSRSMDQVRELILKYGNSAGS-----------GSKRPWDGHEDDDDDDIPEWQPQVTGHQVQLPPPPPDLSPQFHSR 988
BLAST of FG529969 vs. TrEMBL
Match: Q3E7G3_ARATH (Putative uncharacterized protein At5g25520.2 OS=Arabidopsis thaliana GN=At5g25520 PE=4 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 3.997e-7 Identity = 36/98 (36.73%), Postives = 46/98 (46.94%), Query Frame = 1 Query: 202 EDDLPEYNFSSSSNPSVLVKKPMGPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSIQPWN----DDDDDIPEWQPNM 483 +DDLPE+NF+SSS P +P SR Q+REL+ KYG + GS +PW+ DDDDDIPEWQP + Sbjct: 877 DDDLPEFNFNSSSGPVTSSPRP------------------PLQSRSLDQVRELILKYGNSTGS-----------GSKRPWDGHDDDDDDDIPEWQPQL 945
BLAST of FG529969 vs. TAIR peptide
Match: AT5G25520.2 (| Symbols: | SPOC domain / Transcription elongation factor S-II protein | chr5:8885550-8889484 FORWARD LENGTH=997) HSP 1 Score: 58.151 bits (139), Expect = 3.292e-9 Identity = 36/98 (36.73%), Postives = 46/98 (46.94%), Query Frame = 1 Query: 202 EDDLPEYNFSSSSNPSVLVKKPMGPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSIQPWN----DDDDDIPEWQPNM 483 +DDLPE+NF+SSS P +P SR Q+REL+ KYG + GS +PW+ DDDDDIPEWQP + Sbjct: 877 DDDLPEFNFNSSSGPVTSSPRP------------------PLQSRSLDQVRELILKYGNSTGS-----------GSKRPWDGHDDDDDDDIPEWQPQL 945
BLAST of FG529969 vs. TAIR peptide
Match: AT5G11430.1 (| Symbols: | SPOC domain / Transcription elongation factor S-II protein | chr5:3648469-3652256 FORWARD LENGTH=873) HSP 1 Score: 55.0694 bits (131), Expect = 2.787e-8 Identity = 34/103 (33.01%), Postives = 48/103 (46.60%), Query Frame = 1 Query: 196 RVEDDLPEYNFSSSSNPSVLVKKPMGPSMAPXXXXXXXXXXGQTPSRPAQQMRELVHKYGQNVTPVSSVNWQDKFRGSIQPWNDDDDDIPEWQPNMNQNQFTP 504 R EDDLPE+NF+SS P P P S+ Q+R+L+HKYG++ + +DD+DDIPEWQP++ +Q P Sbjct: 761 RDEDDLPEFNFNSSVVPV------SSPQPLP------------AQSKSLDQVRKLIHKYGKSASTYDD--------------DDDEDDIPEWQPHVPSHQLPP 831 The following BLAST results are available for this feature:
BLAST of FG529969 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 9
BLAST of FG529969 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG529969 ID=FG529969; Name=FG529969; organism=Pisum sativum; type=EST; length=537bpback to top |