FG530659

EST Overview
NameFG530659
Unique NameFG530659
TypeEST
OrganismPisum sativum (pea)
Sequence length578
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
KEGG analysis for Pisum sativum unigene v12011-01-05
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG530659 vs. TrEMBL
Match: D7SKR3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025102001 PE=4 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.158e-40
Identity = 83/137 (60.58%), Postives = 104/137 (75.91%), Query Frame = 3
Query:    3 DMQSNYTPQLNYLENEAXXXXXXXXXX-PQHNHRFSEIGNTFSQLGDPYGVSSRI-DQSHVSNLATFPQLSLQQSRNAVLSNGNWDGWNELQNGNRMGMAELLRNERPEFSKFYRGYDDSKYQMPNSGDLYNRTFGI 407
            DM+SN+ PQL+  ENEA           P  N RF++IG  FS LGD YG+ SR+ +QS  SN++ F QLSLQQSRNA++SNG+WDGWNE+Q+GN + MAELLRNER  ++KFY GY+DSK++MP SGDLYNRTFGI
Sbjct:  886 DMRSNFHPQLSAFENEARLQLLMQRSLSPHQNLRFADIGEGFSPLGDAYGIPSRLMEQSQASNISPFAQLSLQQSRNAIMSNGHWDGWNEIQSGNDLNMAELLRNERLGYNKFYTGYEDSKFRMPPSGDLYNRTFGI 1022          
BLAST of FG530659 vs. TrEMBL
Match: B9HPP2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_723369 PE=4 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.264e-35
Identity = 74/136 (54.41%), Postives = 99/136 (72.79%), Query Frame = 3
Query:    3 DMQSNYTPQLNYLENEAXXXXXXXXXXPQH-NHRFSEIGNTFSQLGDPYGVSSR-IDQSHVSNLATFPQLSLQQSRNAVLSNGNWDGWNELQNGNRMGMAELLRNERPEFSKFY-RGYDDSKYQMPNSGDLYNRTF 401
            DM+SN+  QL++ +NEA          P H N R+++ G++FS L D +G+SSR +DQS +S L+ + QLSLQQSRN ++ NG WDGWNE+Q GN + M ELLRNER  F+KFY  GY+DSK++MP+S DLYNRTF
Sbjct:  241 DMRSNFPQQLHHFDNEARLQLLMQRSLPPHQNTRYADTGDSFSSLNDSFGISSRLVDQSQISGLSPYAQLSLQQSRNGLVPNGRWDGWNEVQGGNSLRMTELLRNERVGFNKFYTSGYEDSKFRMPSSDDLYNRTF 376          
BLAST of FG530659 vs. TrEMBL
Match: Q9LSS9_ARATH (General negative transcription regulator-like OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.089e-22
Identity = 66/143 (46.15%), Postives = 89/143 (62.24%), Query Frame = 3
Query:    3 DMQSNYTPQLNYLENEAXXXXXXXXXXP---QHNHRFSEIGNTFSQLGDPYGVSSRI-DQSHVSNLATFPQLSLQQ-SRNAVLSNGN-WDGWNELQNGNRMGMAELLRNERPEF--SKFYRGYDDSKYQMPNSGDLYNRTFGI 407
            DM+S ++ QLN  ENE               Q N    ++ N    L DPYG SSR+ DQ+  S+L+ F QL  QQ S N++LSNG+ WD WNE Q+ N +GMAELLRNER  F  S +  GY++ K+++P+ GD+YNRT+GI
Sbjct:  847 DMRSGFSSQLNSFENETGLHMLRQQSLSSAQQVNGFHHDLRNLSPSLNDPYGFSSRLMDQTQGSSLSPFSQLPRQQPSANSILSNGHHWDKWNEGQSVNNIGMAELLRNERLGFNGSLYNNGYEEPKFRIPSPGDVYNRTYGI 989          
BLAST of FG530659 vs. TrEMBL
Match: Q0WQI8_ARATH (Putative uncharacterized protein At5g60170 (Fragment) OS=Arabidopsis thaliana GN=At5g60170 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.089e-22
Identity = 66/143 (46.15%), Postives = 89/143 (62.24%), Query Frame = 3
Query:    3 DMQSNYTPQLNYLENEAXXXXXXXXXXP---QHNHRFSEIGNTFSQLGDPYGVSSRI-DQSHVSNLATFPQLSLQQ-SRNAVLSNGN-WDGWNELQNGNRMGMAELLRNERPEF--SKFYRGYDDSKYQMPNSGDLYNRTFGI 407
            DM+S ++ QLN  ENE               Q N    ++ N    L DPYG SSR+ DQ+  S+L+ F QL  QQ S N++LSNG+ WD WNE Q+ N +GMAELLRNER  F  S +  GY++ K+++P+ GD+YNRT+GI
Sbjct:  883 DMRSGFSSQLNSFENETGLHMLRQQSLSSAQQVNGFHHDLRNLSPSLNDPYGFSSRLMDQTQGSSLSPFSQLPRQQPSANSILSNGHHWDKWNEGQSVNNIGMAELLRNERLGFNGSLYNNGYEEPKFRIPSPGDVYNRTYGI 1025          
BLAST of FG530659 vs. TrEMBL
Match: D7MNJ1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_916608 PE=4 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.169e-22
Identity = 58/141 (41.13%), Postives = 81/141 (57.45%), Query Frame = 3
Query:    3 DMQSNYTPQLNYLENEAXXXXXXXXXXPQHN----HRFSEIGNTFSQLGDPYGVSSRI-DQSHVSNLATFPQLSLQQSRNAVLSNGNWDGWNELQNGNRMGMAELLRNERPEFS-KFYRGYDDSKYQMPNSGDLYNRTFGI 407
            DM+S ++ QL   EN+A                  H    + N  S L DPYG+SSR+ DQ+  + L+ F QL  Q S N +LSNG+WD WNE Q+GN +G  +LLRN+R  F+   Y  +++ K++ P  GD YNRT+GI
Sbjct:   78 DMRSGFSSQLKSFENDARLQLLAQRSLAAQQVNGFHVLMNVNNFSSSLSDPYGISSRLMDQTQGTGLSPFTQLPRQASPNPLLSNGHWDKWNETQSGNNLGTNQLLRNDRMGFNDNVYSRFEEPKFRRPGPGDQYNRTYGI 218          
BLAST of FG530659 vs. TrEMBL
Match: D7MTS4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_358235 PE=4 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.573e-21
Identity = 62/143 (43.36%), Postives = 89/143 (62.24%), Query Frame = 3
Query:    3 DMQSNYTPQLNYLENEAXXXXXXXXXXP----QHNHRFSEIGNTFSQLGDPYGVSSRI-DQSHVSNLATFPQLSLQQ-SRNAVLSNGNWDGWNELQNGNRMGMAELLRNERPEFS-KFY-RGYDDSKYQMPNSGDLYNRTFGI 407
            D++S ++ QLN  E+E                Q N    ++ N    L DPYG S+R+ DQ+  S+L+ F QLS QQ S N++L NG+WD WNE Q+ N +GMA+L RNER  F+  FY  GY++ K+++P+ GD+YNRT+GI
Sbjct:  859 DLRSGFSSQLNSFEHETGLHMLRQQSLSAAHQQVNGFHHDLRNLSPSLNDPYGFSARLMDQTQGSSLSPFSQLSRQQPSANSILPNGHWDKWNEGQSVNSIGMADLRRNERLGFNGSFYNNGYEEPKFRIPSPGDVYNRTYGI 1001          
BLAST of FG530659 vs. TrEMBL
Match: Q9M1E4_ARATH (Putative uncharacterized protein F9K21.210 OS=Arabidopsis thaliana GN=F9K21.210 PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.054e-21
Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 3
Query:    3 DMQSNYTPQLNYLENEAXXXXXXXXXXPQHN----HRFSEIGNTFSQLGDPYGVSSR-IDQSHVSNLATFPQLSLQQSRNAVLSNGNWDG-WNELQNGNRMGMAELLRNERPEFS-KFYRGYDDSKYQMPNSGDLYNRTFGI 407
            D++S ++ QLN  +N+A                  H    + N  S   DPYG+SSR  DQ+  + L+ F QL  Q S N +LSNG+WD  WNE Q+GN +G+ +LLRNER  F+   Y G+++ K++ P  GD YNRT+GI
Sbjct:  848 DLRSGFSSQLNSFDNDARLQLLAQRSLAAQQVNGFHDPRNVNNFSSSFSDPYGISSRPTDQTQGTGLSPFTQLPRQASANPLLSNGHWDNKWNEPQSGNNLGITQLLRNERMGFNDNVYSGFEEPKFRRPGPGDPYNRTYGI 989          
BLAST of FG530659 vs. TrEMBL
Match: D7LMP7_ARALY (RNA recognition motif-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484947 PE=4 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.504e-21
Identity = 59/142 (41.55%), Postives = 84/142 (59.15%), Query Frame = 3
Query:    3 DMQSNYTPQLNYLENEAXXXXXXXXXXPQHN----HRFSEIGNTFSQLGDPYGV-SSRI-DQSHVSNLATFPQLSLQQSRNAVLSNGNWDGWNELQNGNRMGMAELLRNERPEFS-KFYRGYDDSKYQMPNSGDLYNRTFGI 407
            DM+S ++ QLN  EN+A                  H    + N  S + DPYG+ SSR+ DQ+  + L+ F QL  Q S N +LSNG+WD WNE Q+GN +G+ +LLRNER  FS   Y  +++ K++ P+ GD YNRT+G+
Sbjct:  848 DMRSGFSSQLNSFENDARLQLLAQRSLAAQQVNGFHDPRNVNNFSSLVSDPYGIISSRLMDQTQGAGLSPFTQLPRQASPNPLLSNGHWDKWNEPQSGNNLGITQLLRNERMGFSDNVYSRFEEPKFRRPSPGDPYNRTYGM 989          
BLAST of FG530659 vs. TrEMBL
Match: Q7XXS1_ORYSJ (Os11g0102800 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os11g0102800 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.973e-12
Identity = 46/138 (33.33%), Postives = 75/138 (54.35%), Query Frame = 3
Query:    3 DMQSNYT-PQLNYLENEAXXXXXXXXXXPQH-NHRFSE-IGNTFSQLGDPYGVSSRIDQSHVSNLATFPQLSLQQSRNAVLSNGNWDGWNELQNGNRMGMAELLRNERPEFSKFYRGYDDSKYQMPNSGDLYNRTFGI 407
            +M++++T P      N+           P H N  F+E + + F+ + D Y  S  I Q+H S L+++ Q+SLQQ R++ L+NG+WDGW +L+ GN + M        P+ S+     + + + M  S DLYNR FG+
Sbjct:  142 EMKTSHTFPSQLQTSNDPRFQLLMQQNVPSHQNVGFAEHVQDAFNPMNDNYLASRLIPQNHGS-LSSYTQMSLQQPRSSHLTNGHWDGWGDLRQGNNVSM--------PDMSRMLYPTEANNFHMLGSNDLYNRAFGL 270          
BLAST of FG530659 vs. TrEMBL
Match: Q2RBQ6_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g01190 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.973e-12
Identity = 46/138 (33.33%), Postives = 75/138 (54.35%), Query Frame = 3
Query:    3 DMQSNYT-PQLNYLENEAXXXXXXXXXXPQH-NHRFSE-IGNTFSQLGDPYGVSSRIDQSHVSNLATFPQLSLQQSRNAVLSNGNWDGWNELQNGNRMGMAELLRNERPEFSKFYRGYDDSKYQMPNSGDLYNRTFGI 407
            +M++++T P      N+           P H N  F+E + + F+ + D Y  S  I Q+H S L+++ Q+SLQQ R++ L+NG+WDGW +L+ GN + M        P+ S+     + + + M  S DLYNR FG+
Sbjct: 1038 EMKTSHTFPSQLQTSNDPRFQLLMQQNVPSHQNVGFAEHVQDAFNPMNDNYLASRLIPQNHGS-LSSYTQMSLQQPRSSHLTNGHWDGWGDLRQGNNVSM--------PDMSRMLYPTEANNFHMLGSNDLYNRAFGL 1166          
BLAST of FG530659 vs. TAIR peptide
Match: AT5G60170.2 (| Symbols: | RNA binding (RRM/RBD/RNP motifs) family protein | chr5:24228178-24232394 FORWARD LENGTH=987)

HSP 1 Score: 110.153 bits (274), Expect = 8.305e-25
Identity = 66/143 (46.15%), Postives = 89/143 (62.24%), Query Frame = 3
Query:    3 DMQSNYTPQLNYLENEAXXXXXXXXXXP---QHNHRFSEIGNTFSQLGDPYGVSSRI-DQSHVSNLATFPQLSLQQ-SRNAVLSNGN-WDGWNELQNGNRMGMAELLRNERPEF--SKFYRGYDDSKYQMPNSGDLYNRTFGI 407
            DM+S ++ QLN  ENE               Q N    ++ N    L DPYG SSR+ DQ+  S+L+ F QL  QQ S N++LSNG+ WD WNE Q+ N +GMAELLRNER  F  S +  GY++ K+++P+ GD+YNRT+GI
Sbjct:  845 DMRSGFSSQLNSFENETGLHMLRQQSLSSAQQVNGFHHDLRNLSPSLNDPYGFSSRLMDQTQGSSLSPFSQLPRQQPSANSILSNGHHWDKWNEGQSVNNIGMAELLRNERLGFNGSLYNNGYEEPKFRIPSPGDVYNRTYGI 987          
BLAST of FG530659 vs. TAIR peptide
Match: AT5G60170.1 (| Symbols: | RNA binding (RRM/RBD/RNP motifs) family protein | chr5:24228178-24232394 FORWARD LENGTH=985)

HSP 1 Score: 110.153 bits (274), Expect = 8.305e-25
Identity = 66/143 (46.15%), Postives = 89/143 (62.24%), Query Frame = 3
Query:    3 DMQSNYTPQLNYLENEAXXXXXXXXXXP---QHNHRFSEIGNTFSQLGDPYGVSSRI-DQSHVSNLATFPQLSLQQ-SRNAVLSNGN-WDGWNELQNGNRMGMAELLRNERPEF--SKFYRGYDDSKYQMPNSGDLYNRTFGI 407
            DM+S ++ QLN  ENE               Q N    ++ N    L DPYG SSR+ DQ+  S+L+ F QL  QQ S N++LSNG+ WD WNE Q+ N +GMAELLRNER  F  S +  GY++ K+++P+ GD+YNRT+GI
Sbjct:  843 DMRSGFSSQLNSFENETGLHMLRQQSLSSAQQVNGFHHDLRNLSPSLNDPYGFSSRLMDQTQGSSLSPFSQLPRQQPSANSILSNGHHWDKWNEGQSVNNIGMAELLRNERLGFNGSLYNNGYEEPKFRIPSPGDVYNRTYGI 985          
BLAST of FG530659 vs. TAIR peptide
Match: AT3G45630.1 (| Symbols: | RNA binding (RRM/RBD/RNP motifs) family protein | chr3:16748751-16753190 REVERSE LENGTH=989)

HSP 1 Score: 105.916 bits (263), Expect = 1.566e-23
Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 3
Query:    3 DMQSNYTPQLNYLENEAXXXXXXXXXXPQHN----HRFSEIGNTFSQLGDPYGVSSR-IDQSHVSNLATFPQLSLQQSRNAVLSNGNWDG-WNELQNGNRMGMAELLRNERPEFS-KFYRGYDDSKYQMPNSGDLYNRTFGI 407
            D++S ++ QLN  +N+A                  H    + N  S   DPYG+SSR  DQ+  + L+ F QL  Q S N +LSNG+WD  WNE Q+GN +G+ +LLRNER  F+   Y G+++ K++ P  GD YNRT+GI
Sbjct:  848 DLRSGFSSQLNSFDNDARLQLLAQRSLAAQQVNGFHDPRNVNNFSSSFSDPYGISSRPTDQTQGTGLSPFTQLPRQASANPLLSNGHWDNKWNEPQSGNNLGITQLLRNERMGFNDNVYSGFEEPKFRRPGPGDPYNRTYGI 989          
The following BLAST results are available for this feature:
BLAST of FG530659 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7SKR3_VITVI1.158e-4060.58Whole genome shotgun sequence of line PN40024, sca... [more]
B9HPP2_POPTR3.264e-3554.41Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q9LSS9_ARATH1.089e-2246.15General negative transcription regulator-like OS=A... [more]
Q0WQI8_ARATH1.089e-2246.15Putative uncharacterized protein At5g60170 (Fragme... [more]
D7MNJ1_ARALY3.169e-2241.13Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7MTS4_ARALY1.573e-2143.36Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9M1E4_ARATH2.054e-2140.85Putative uncharacterized protein F9K21.210 OS=Arab... [more]
D7LMP7_ARALY3.504e-2141.55RNA recognition motif-containing protein OS=Arabid... [more]
Q7XXS1_ORYSJ2.973e-1233.33Os11g0102800 protein (Fragment) OS=Oryza sativa su... [more]
Q2RBQ6_ORYSJ2.973e-1233.33Expressed protein OS=Oryza sativa subsp. japonica ... [more]
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BLAST of FG530659 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G60170.28.305e-2546.15| Symbols: | RNA binding (RRM/RBD/RNP motifs) fam... [more]
AT5G60170.18.305e-2546.15| Symbols: | RNA binding (RRM/RBD/RNP motifs) fam... [more]
AT3G45630.11.566e-2340.85| Symbols: | RNA binding (RRM/RBD/RNP motifs) fam... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 18..27
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG530659 ID=FG530659; Name=FG530659; organism=Pisum sativum; type=EST; length=578bp
TAGACATGCAATCCAATTACACCCCACAATTAAATTACCTTGAGAACGAA
GCCAGACTTCAGTTATTGCAAAGATCTCTCTCACCACAACATAACCATCG
ATTTTCGGAAATTGGAAACACATTTTCTCAGCTTGGTGATCCTTATGGAG
TTTCTTCACGGATAGATCAATCACATGTCAGTAATCTGGCAACATTTCCT
CAACTGTCTCTCCAGCAGTCTAGAAATGCTGTCTTGTCAAATGGCAATTG
GGATGGGTGGAATGAATTGCAGAATGGAAATAGGATGGGTATGGCCGAGC
TTTTAAGAAACGAAAGACCCGAGTTTAGTAAGTTTTATAGAGGATATGAT
GATTCAAAATACCAGATGCCAAATTCTGGGGATCTATACAACAGGACATT
TGGGATTTGAATTTATTGGTTATACTATTTTTCTCAATTTTGGGCATGGC
AAATCCAAGGCAGAAGTGGAAAAGCACAATTTTTCCGGCATTGCTAAAGG
TGTTCGAGCTGGCTCTTGCTCTCGGCATTATCTGTCTAATGAACTTATGG
CTACGATGATAGTCGAAGACGTGCAGTT
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