FG530659
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG530659 vs. TrEMBL
Match: D7SKR3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025102001 PE=4 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.158e-40 Identity = 83/137 (60.58%), Postives = 104/137 (75.91%), Query Frame = 3 Query: 3 DMQSNYTPQLNYLENEAXXXXXXXXXX-PQHNHRFSEIGNTFSQLGDPYGVSSRI-DQSHVSNLATFPQLSLQQSRNAVLSNGNWDGWNELQNGNRMGMAELLRNERPEFSKFYRGYDDSKYQMPNSGDLYNRTFGI 407 DM+SN+ PQL+ ENEA P N RF++IG FS LGD YG+ SR+ +QS SN++ F QLSLQQSRNA++SNG+WDGWNE+Q+GN + MAELLRNER ++KFY GY+DSK++MP SGDLYNRTFGI Sbjct: 886 DMRSNFHPQLSAFENEARLQLLMQRSLSPHQNLRFADIGEGFSPLGDAYGIPSRLMEQSQASNISPFAQLSLQQSRNAIMSNGHWDGWNEIQSGNDLNMAELLRNERLGYNKFYTGYEDSKFRMPPSGDLYNRTFGI 1022
BLAST of FG530659 vs. TrEMBL
Match: B9HPP2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_723369 PE=4 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.264e-35 Identity = 74/136 (54.41%), Postives = 99/136 (72.79%), Query Frame = 3 Query: 3 DMQSNYTPQLNYLENEAXXXXXXXXXXPQH-NHRFSEIGNTFSQLGDPYGVSSR-IDQSHVSNLATFPQLSLQQSRNAVLSNGNWDGWNELQNGNRMGMAELLRNERPEFSKFY-RGYDDSKYQMPNSGDLYNRTF 401 DM+SN+ QL++ +NEA P H N R+++ G++FS L D +G+SSR +DQS +S L+ + QLSLQQSRN ++ NG WDGWNE+Q GN + M ELLRNER F+KFY GY+DSK++MP+S DLYNRTF Sbjct: 241 DMRSNFPQQLHHFDNEARLQLLMQRSLPPHQNTRYADTGDSFSSLNDSFGISSRLVDQSQISGLSPYAQLSLQQSRNGLVPNGRWDGWNEVQGGNSLRMTELLRNERVGFNKFYTSGYEDSKFRMPSSDDLYNRTF 376
BLAST of FG530659 vs. TrEMBL
Match: Q9LSS9_ARATH (General negative transcription regulator-like OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.089e-22 Identity = 66/143 (46.15%), Postives = 89/143 (62.24%), Query Frame = 3 Query: 3 DMQSNYTPQLNYLENEAXXXXXXXXXXP---QHNHRFSEIGNTFSQLGDPYGVSSRI-DQSHVSNLATFPQLSLQQ-SRNAVLSNGN-WDGWNELQNGNRMGMAELLRNERPEF--SKFYRGYDDSKYQMPNSGDLYNRTFGI 407 DM+S ++ QLN ENE Q N ++ N L DPYG SSR+ DQ+ S+L+ F QL QQ S N++LSNG+ WD WNE Q+ N +GMAELLRNER F S + GY++ K+++P+ GD+YNRT+GI Sbjct: 847 DMRSGFSSQLNSFENETGLHMLRQQSLSSAQQVNGFHHDLRNLSPSLNDPYGFSSRLMDQTQGSSLSPFSQLPRQQPSANSILSNGHHWDKWNEGQSVNNIGMAELLRNERLGFNGSLYNNGYEEPKFRIPSPGDVYNRTYGI 989
BLAST of FG530659 vs. TrEMBL
Match: Q0WQI8_ARATH (Putative uncharacterized protein At5g60170 (Fragment) OS=Arabidopsis thaliana GN=At5g60170 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.089e-22 Identity = 66/143 (46.15%), Postives = 89/143 (62.24%), Query Frame = 3 Query: 3 DMQSNYTPQLNYLENEAXXXXXXXXXXP---QHNHRFSEIGNTFSQLGDPYGVSSRI-DQSHVSNLATFPQLSLQQ-SRNAVLSNGN-WDGWNELQNGNRMGMAELLRNERPEF--SKFYRGYDDSKYQMPNSGDLYNRTFGI 407 DM+S ++ QLN ENE Q N ++ N L DPYG SSR+ DQ+ S+L+ F QL QQ S N++LSNG+ WD WNE Q+ N +GMAELLRNER F S + GY++ K+++P+ GD+YNRT+GI Sbjct: 883 DMRSGFSSQLNSFENETGLHMLRQQSLSSAQQVNGFHHDLRNLSPSLNDPYGFSSRLMDQTQGSSLSPFSQLPRQQPSANSILSNGHHWDKWNEGQSVNNIGMAELLRNERLGFNGSLYNNGYEEPKFRIPSPGDVYNRTYGI 1025
BLAST of FG530659 vs. TrEMBL
Match: D7MNJ1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_916608 PE=4 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.169e-22 Identity = 58/141 (41.13%), Postives = 81/141 (57.45%), Query Frame = 3 Query: 3 DMQSNYTPQLNYLENEAXXXXXXXXXXPQHN----HRFSEIGNTFSQLGDPYGVSSRI-DQSHVSNLATFPQLSLQQSRNAVLSNGNWDGWNELQNGNRMGMAELLRNERPEFS-KFYRGYDDSKYQMPNSGDLYNRTFGI 407 DM+S ++ QL EN+A H + N S L DPYG+SSR+ DQ+ + L+ F QL Q S N +LSNG+WD WNE Q+GN +G +LLRN+R F+ Y +++ K++ P GD YNRT+GI Sbjct: 78 DMRSGFSSQLKSFENDARLQLLAQRSLAAQQVNGFHVLMNVNNFSSSLSDPYGISSRLMDQTQGTGLSPFTQLPRQASPNPLLSNGHWDKWNETQSGNNLGTNQLLRNDRMGFNDNVYSRFEEPKFRRPGPGDQYNRTYGI 218
BLAST of FG530659 vs. TrEMBL
Match: D7MTS4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_358235 PE=4 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.573e-21 Identity = 62/143 (43.36%), Postives = 89/143 (62.24%), Query Frame = 3 Query: 3 DMQSNYTPQLNYLENEAXXXXXXXXXXP----QHNHRFSEIGNTFSQLGDPYGVSSRI-DQSHVSNLATFPQLSLQQ-SRNAVLSNGNWDGWNELQNGNRMGMAELLRNERPEFS-KFY-RGYDDSKYQMPNSGDLYNRTFGI 407 D++S ++ QLN E+E Q N ++ N L DPYG S+R+ DQ+ S+L+ F QLS QQ S N++L NG+WD WNE Q+ N +GMA+L RNER F+ FY GY++ K+++P+ GD+YNRT+GI Sbjct: 859 DLRSGFSSQLNSFEHETGLHMLRQQSLSAAHQQVNGFHHDLRNLSPSLNDPYGFSARLMDQTQGSSLSPFSQLSRQQPSANSILPNGHWDKWNEGQSVNSIGMADLRRNERLGFNGSFYNNGYEEPKFRIPSPGDVYNRTYGI 1001
BLAST of FG530659 vs. TrEMBL
Match: Q9M1E4_ARATH (Putative uncharacterized protein F9K21.210 OS=Arabidopsis thaliana GN=F9K21.210 PE=4 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.054e-21 Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 3 Query: 3 DMQSNYTPQLNYLENEAXXXXXXXXXXPQHN----HRFSEIGNTFSQLGDPYGVSSR-IDQSHVSNLATFPQLSLQQSRNAVLSNGNWDG-WNELQNGNRMGMAELLRNERPEFS-KFYRGYDDSKYQMPNSGDLYNRTFGI 407 D++S ++ QLN +N+A H + N S DPYG+SSR DQ+ + L+ F QL Q S N +LSNG+WD WNE Q+GN +G+ +LLRNER F+ Y G+++ K++ P GD YNRT+GI Sbjct: 848 DLRSGFSSQLNSFDNDARLQLLAQRSLAAQQVNGFHDPRNVNNFSSSFSDPYGISSRPTDQTQGTGLSPFTQLPRQASANPLLSNGHWDNKWNEPQSGNNLGITQLLRNERMGFNDNVYSGFEEPKFRRPGPGDPYNRTYGI 989
BLAST of FG530659 vs. TrEMBL
Match: D7LMP7_ARALY (RNA recognition motif-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484947 PE=4 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.504e-21 Identity = 59/142 (41.55%), Postives = 84/142 (59.15%), Query Frame = 3 Query: 3 DMQSNYTPQLNYLENEAXXXXXXXXXXPQHN----HRFSEIGNTFSQLGDPYGV-SSRI-DQSHVSNLATFPQLSLQQSRNAVLSNGNWDGWNELQNGNRMGMAELLRNERPEFS-KFYRGYDDSKYQMPNSGDLYNRTFGI 407 DM+S ++ QLN EN+A H + N S + DPYG+ SSR+ DQ+ + L+ F QL Q S N +LSNG+WD WNE Q+GN +G+ +LLRNER FS Y +++ K++ P+ GD YNRT+G+ Sbjct: 848 DMRSGFSSQLNSFENDARLQLLAQRSLAAQQVNGFHDPRNVNNFSSLVSDPYGIISSRLMDQTQGAGLSPFTQLPRQASPNPLLSNGHWDKWNEPQSGNNLGITQLLRNERMGFSDNVYSRFEEPKFRRPSPGDPYNRTYGM 989
BLAST of FG530659 vs. TrEMBL
Match: Q7XXS1_ORYSJ (Os11g0102800 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os11g0102800 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.973e-12 Identity = 46/138 (33.33%), Postives = 75/138 (54.35%), Query Frame = 3 Query: 3 DMQSNYT-PQLNYLENEAXXXXXXXXXXPQH-NHRFSE-IGNTFSQLGDPYGVSSRIDQSHVSNLATFPQLSLQQSRNAVLSNGNWDGWNELQNGNRMGMAELLRNERPEFSKFYRGYDDSKYQMPNSGDLYNRTFGI 407 +M++++T P N+ P H N F+E + + F+ + D Y S I Q+H S L+++ Q+SLQQ R++ L+NG+WDGW +L+ GN + M P+ S+ + + + M S DLYNR FG+ Sbjct: 142 EMKTSHTFPSQLQTSNDPRFQLLMQQNVPSHQNVGFAEHVQDAFNPMNDNYLASRLIPQNHGS-LSSYTQMSLQQPRSSHLTNGHWDGWGDLRQGNNVSM--------PDMSRMLYPTEANNFHMLGSNDLYNRAFGL 270
BLAST of FG530659 vs. TrEMBL
Match: Q2RBQ6_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g01190 PE=4 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.973e-12 Identity = 46/138 (33.33%), Postives = 75/138 (54.35%), Query Frame = 3 Query: 3 DMQSNYT-PQLNYLENEAXXXXXXXXXXPQH-NHRFSE-IGNTFSQLGDPYGVSSRIDQSHVSNLATFPQLSLQQSRNAVLSNGNWDGWNELQNGNRMGMAELLRNERPEFSKFYRGYDDSKYQMPNSGDLYNRTFGI 407 +M++++T P N+ P H N F+E + + F+ + D Y S I Q+H S L+++ Q+SLQQ R++ L+NG+WDGW +L+ GN + M P+ S+ + + + M S DLYNR FG+ Sbjct: 1038 EMKTSHTFPSQLQTSNDPRFQLLMQQNVPSHQNVGFAEHVQDAFNPMNDNYLASRLIPQNHGS-LSSYTQMSLQQPRSSHLTNGHWDGWGDLRQGNNVSM--------PDMSRMLYPTEANNFHMLGSNDLYNRAFGL 1166
BLAST of FG530659 vs. TAIR peptide
Match: AT5G60170.2 (| Symbols: | RNA binding (RRM/RBD/RNP motifs) family protein | chr5:24228178-24232394 FORWARD LENGTH=987) HSP 1 Score: 110.153 bits (274), Expect = 8.305e-25 Identity = 66/143 (46.15%), Postives = 89/143 (62.24%), Query Frame = 3 Query: 3 DMQSNYTPQLNYLENEAXXXXXXXXXXP---QHNHRFSEIGNTFSQLGDPYGVSSRI-DQSHVSNLATFPQLSLQQ-SRNAVLSNGN-WDGWNELQNGNRMGMAELLRNERPEF--SKFYRGYDDSKYQMPNSGDLYNRTFGI 407 DM+S ++ QLN ENE Q N ++ N L DPYG SSR+ DQ+ S+L+ F QL QQ S N++LSNG+ WD WNE Q+ N +GMAELLRNER F S + GY++ K+++P+ GD+YNRT+GI Sbjct: 845 DMRSGFSSQLNSFENETGLHMLRQQSLSSAQQVNGFHHDLRNLSPSLNDPYGFSSRLMDQTQGSSLSPFSQLPRQQPSANSILSNGHHWDKWNEGQSVNNIGMAELLRNERLGFNGSLYNNGYEEPKFRIPSPGDVYNRTYGI 987
BLAST of FG530659 vs. TAIR peptide
Match: AT5G60170.1 (| Symbols: | RNA binding (RRM/RBD/RNP motifs) family protein | chr5:24228178-24232394 FORWARD LENGTH=985) HSP 1 Score: 110.153 bits (274), Expect = 8.305e-25 Identity = 66/143 (46.15%), Postives = 89/143 (62.24%), Query Frame = 3 Query: 3 DMQSNYTPQLNYLENEAXXXXXXXXXXP---QHNHRFSEIGNTFSQLGDPYGVSSRI-DQSHVSNLATFPQLSLQQ-SRNAVLSNGN-WDGWNELQNGNRMGMAELLRNERPEF--SKFYRGYDDSKYQMPNSGDLYNRTFGI 407 DM+S ++ QLN ENE Q N ++ N L DPYG SSR+ DQ+ S+L+ F QL QQ S N++LSNG+ WD WNE Q+ N +GMAELLRNER F S + GY++ K+++P+ GD+YNRT+GI Sbjct: 843 DMRSGFSSQLNSFENETGLHMLRQQSLSSAQQVNGFHHDLRNLSPSLNDPYGFSSRLMDQTQGSSLSPFSQLPRQQPSANSILSNGHHWDKWNEGQSVNNIGMAELLRNERLGFNGSLYNNGYEEPKFRIPSPGDVYNRTYGI 985
BLAST of FG530659 vs. TAIR peptide
Match: AT3G45630.1 (| Symbols: | RNA binding (RRM/RBD/RNP motifs) family protein | chr3:16748751-16753190 REVERSE LENGTH=989) HSP 1 Score: 105.916 bits (263), Expect = 1.566e-23 Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 3 Query: 3 DMQSNYTPQLNYLENEAXXXXXXXXXXPQHN----HRFSEIGNTFSQLGDPYGVSSR-IDQSHVSNLATFPQLSLQQSRNAVLSNGNWDG-WNELQNGNRMGMAELLRNERPEFS-KFYRGYDDSKYQMPNSGDLYNRTFGI 407 D++S ++ QLN +N+A H + N S DPYG+SSR DQ+ + L+ F QL Q S N +LSNG+WD WNE Q+GN +G+ +LLRNER F+ Y G+++ K++ P GD YNRT+GI Sbjct: 848 DLRSGFSSQLNSFDNDARLQLLAQRSLAAQQVNGFHDPRNVNNFSSSFSDPYGISSRPTDQTQGTGLSPFTQLPRQASANPLLSNGHWDNKWNEPQSGNNLGITQLLRNERMGFNDNVYSGFEEPKFRRPGPGDPYNRTYGI 989 The following BLAST results are available for this feature:
BLAST of FG530659 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of FG530659 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG530659 ID=FG530659; Name=FG530659; organism=Pisum sativum; type=EST; length=578bpback to top |