FG531832

EST Overview
NameFG531832
Unique NameFG531832
TypeEST
OrganismPisum sativum (pea)
Sequence length405
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
[Close]
BLAST of FG531832 vs. TrEMBL
Match: B9RVY3_RICCO (Cleavage and polyadenylation specificity factor, putative OS=Ricinus communis GN=RCOM_1174070 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.236e-24
Identity = 52/61 (85.25%), Postives = 57/61 (93.44%), Query Frame = 1 
Query:    7 GIPVEFAGGALRCGEYVTVRKVGDATQKGAGSGTQQIIIEGPLCEDYYKIRDYLYSQFYLL 189
            G+ VEFAGGALRCGEYVT+RKVG+  QKG GSGTQQI+IEGPLCEDYYKIR+YLYSQFYLL
Sbjct:  680 GVQVEFAGGALRCGEYVTLRKVGNINQKGGGSGTQQIVIEGPLCEDYYKIREYLYSQFYLL 740
[Close]
BLAST of FG531832 vs. TrEMBL
Match: B9N6K2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_583310 PE=4 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.505e-24
Identity = 52/61 (85.25%), Postives = 57/61 (93.44%), Query Frame = 1 
Query:    7 GIPVEFAGGALRCGEYVTVRKVGDATQKGAGSGTQQIIIEGPLCEDYYKIRDYLYSQFYLL 189
            G+ VEFAGGALRCGEYVT+RKVG+ +QKG  SGTQQIIIEGPLCEDYYKIR+YLYSQFYLL
Sbjct:  680 GVQVEFAGGALRCGEYVTLRKVGNPSQKGGASGTQQIIIEGPLCEDYYKIREYLYSQFYLL 740
[Close]
BLAST of FG531832 vs. TrEMBL
Match: Q42329_ARATH (CPSF homologue (Fragment) OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.356e-21
Identity = 51/62 (82.26%), Postives = 54/62 (87.10%), Query Frame = 1 
Query:    7 GIPVEFAGG-ALRCGEYVTVRKVGDATQKGAGSGTQQIIIEGPLCEDYYKIRDYLYSQFYLL 189
            G+ VEFAGG ALRCGEYVT+RKVG   QKG  SG QQI+IEGPLCEDYYKIRDYLYSQFYLL
Sbjct:   33 GVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILIEGPLCEDYYKIRDYLYSQFYLL 94
[Close]
BLAST of FG531832 vs. TrEMBL
Match: D7M2E1_ARALY (CPSF100 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_489246 PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.356e-21
Identity = 51/62 (82.26%), Postives = 54/62 (87.10%), Query Frame = 1 
Query:    7 GIPVEFAGG-ALRCGEYVTVRKVGDATQKGAGSGTQQIIIEGPLCEDYYKIRDYLYSQFYLL 189
            G+ VEFAGG ALRCGEYVT+RKVG   QKG  SG QQI+IEGPLCEDYYKIRDYLYSQFYLL
Sbjct:  678 GVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILIEGPLCEDYYKIRDYLYSQFYLL 739
[Close]
BLAST of FG531832 vs. TrEMBL
Match: Q0IZH3_ORYSJ (Os09g0569400 protein OS=Oryza sativa subsp. japonica GN=Os09g0569400 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.022e-21
Identity = 48/61 (78.69%), Postives = 57/61 (93.44%), Query Frame = 1 
Query:    7 GIPVEFAGGALRCGEYVTVRKVGDATQKGAGSGTQQIIIEGPLCEDYYKIRDYLYSQFYLL 189
            G+ VEFAGGALRCGEY+T+RK+GDA QKG+ +G+QQI+IEGPLCEDYYKIR+ LYSQFYLL
Sbjct:  679 GLQVEFAGGALRCGEYITLRKIGDAGQKGS-TGSQQIVIEGPLCEDYYKIRELLYSQFYLL 738
[Close]
BLAST of FG531832 vs. TrEMBL
Match: C5WT39_SORBI (Putative uncharacterized protein Sb01g001930 OS=Sorghum bicolor GN=Sb01g001930 PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.558e-20
Identity = 47/61 (77.05%), Postives = 56/61 (91.80%), Query Frame = 1 
Query:    7 GIPVEFAGGALRCGEYVTVRKVGDATQKGAGSGTQQIIIEGPLCEDYYKIRDYLYSQFYLL 189
            G  VEFAGGALRCGEY+ VRK+GD++QKG+ +G+QQI+IEGPLCEDYYKIR+ LYSQFYLL
Sbjct:  679 GWQVEFAGGALRCGEYIMVRKIGDSSQKGS-TGSQQIVIEGPLCEDYYKIRELLYSQFYLL 738
[Close]
BLAST of FG531832 vs. TrEMBL
Match: B7ZZT7_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.165e-19
Identity = 47/61 (77.05%), Postives = 54/61 (88.52%), Query Frame = 1 
Query:    7 GIPVEFAGGALRCGEYVTVRKVGDATQKGAGSGTQQIIIEGPLCEDYYKIRDYLYSQFYLL 189
            G  VEFAGGALRCGEY+ VRKVGD+  KG+ +G+QQI+IEGPLCEDYYKIR+ LYSQFYLL
Sbjct:  678 GWQVEFAGGALRCGEYIMVRKVGDSILKGS-TGSQQIVIEGPLCEDYYKIRELLYSQFYLL 737
[Close]
BLAST of FG531832 vs. TrEMBL
Match: B6U1S6_MAIZE (Cleavage and polyadenylation specificity factor, 100 kDa subunit OS=Zea mays PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.165e-19
Identity = 47/61 (77.05%), Postives = 54/61 (88.52%), Query Frame = 1 
Query:    7 GIPVEFAGGALRCGEYVTVRKVGDATQKGAGSGTQQIIIEGPLCEDYYKIRDYLYSQFYLL 189
            G  VEFAGGALRCGEY+ VRKVGD+  KG+ +G+QQI+IEGPLCEDYYKIR+ LYSQFYLL
Sbjct:  614 GWQVEFAGGALRCGEYIMVRKVGDSILKGS-TGSQQIVIEGPLCEDYYKIRELLYSQFYLL 673
[Close]
BLAST of FG531832 vs. TrEMBL
Match: B8BEN9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32459 PE=4 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.236e-15
Identity = 38/50 (76.00%), Postives = 47/50 (94.00%), Query Frame = 1 
Query:   10 IPVEFAGGALRCGEYVTVRKVGDATQKGAGSGTQQIIIEGPLCEDYYKIR 159
            + VEFAGGALRCGEY+T+RK+GDA QKG+ +G+QQI+IEGPLCEDYYKI+
Sbjct:  684 LQVEFAGGALRCGEYITLRKIGDAGQKGS-TGSQQIVIEGPLCEDYYKIQ 732
[Close]
BLAST of FG531832 vs. TrEMBL
Match: A2Q4J6_MEDTR (Tetratricopeptide-like helical OS=Medicago truncatula GN=MtrDRAFT_AC157502g25v2 PE=4 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.029e-13
Identity = 37/52 (71.15%), Postives = 41/52 (78.85%), Query Frame = 1 
Query:   34 ALRCGEYVTVRKVGDATQKGAGSGTQQIIIEGPLCEDYYKIRDYLYSQFYLL 189
            A +  +     +VG ATQKGA S T+QIIIEGPLCEDYYKIRDYLYSQFYLL
Sbjct: 1032 AFKAAQRGNTSEVGGATQKGADSATRQIIIEGPLCEDYYKIRDYLYSQFYLL 1083
[Close]
BLAST of FG531832 vs. SwissProt
Match: CPSF2_ARATH (Cleavage and polyadenylation specificity factor subunit 2 OS=Arabidopsis thaliana GN=CPSF100 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 6.674e-23
Identity = 51/62 (82.26%), Postives = 54/62 (87.10%), Query Frame = 1 
Query:    7 GIPVEFAGG-ALRCGEYVTVRKVGDATQKGAGSGTQQIIIEGPLCEDYYKIRDYLYSQFYLL 189
            G+ VEFAGG ALRCGEYVT+RKVG   QKG  SG QQI+IEGPLCEDYYKIRDYLYSQFYLL
Sbjct:  678 GVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILIEGPLCEDYYKIRDYLYSQFYLL 739
[Close]
BLAST of FG531832 vs. SwissProt
Match: CPSF2_ORYSJ (Cleavage and polyadenylation specificity factor subunit 2 OS=Oryza sativa subsp. japonica GN=Os09g0569400 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.487e-22
Identity = 48/61 (78.69%), Postives = 57/61 (93.44%), Query Frame = 1 
Query:    7 GIPVEFAGGALRCGEYVTVRKVGDATQKGAGSGTQQIIIEGPLCEDYYKIRDYLYSQFYLL 189
            G+ VEFAGGALRCGEY+T+RK+GDA QKG+ +G+QQI+IEGPLCEDYYKIR+ LYSQFYLL
Sbjct:  679 GLQVEFAGGALRCGEYITLRKIGDAGQKGS-TGSQQIVIEGPLCEDYYKIRELLYSQFYLL 738
[Close]
BLAST of FG531832 vs. TAIR peptide
Match: AT5G23880.1 (| Symbols: EMB1265, CPSF100, ESP5, ATCPSF100 | cleavage and polyadenylation specificity factor 100 | chr5:8052550-8058147 FORWARD LENGTH=739)

HSP 1 Score: 105.916 bits (263), Expect = 7.570e-24
Identity = 51/62 (82.26%), Postives = 54/62 (87.10%), Query Frame = 1 
Query:    7 GIPVEFAGG-ALRCGEYVTVRKVGDATQKGAGSGTQQIIIEGPLCEDYYKIRDYLYSQFYLL 189
            G+ VEFAGG ALRCGEYVT+RKVG   QKG  SG QQI+IEGPLCEDYYKIRDYLYSQFYLL
Sbjct:  678 GVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILIEGPLCEDYYKIRDYLYSQFYLL 739
The following BLAST results are available for this feature:
BLAST of FG531832 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RVY3_RICCO2.236e-2485.25Cleavage and polyadenylation specificity factor, p... [more]
B9N6K2_POPTR6.505e-2485.25Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q42329_ARATH1.356e-2182.26CPSF homologue (Fragment) OS=Arabidopsis thaliana ... [more]
D7M2E1_ARALY1.356e-2182.26CPSF100 OS=Arabidopsis lyrata subsp. lyrata GN=ARA... [more]
Q0IZH3_ORYSJ3.022e-2178.69Os09g0569400 protein OS=Oryza sativa subsp. japoni... [more]
C5WT39_SORBI2.558e-2077.05Putative uncharacterized protein Sb01g001930 OS=So... [more]
B7ZZT7_MAIZE2.165e-1977.05Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B6U1S6_MAIZE2.165e-1977.05Cleavage and polyadenylation specificity factor, 1... [more]
B8BEN9_ORYSI3.236e-1576.00Putative uncharacterized protein OS=Oryza sativa s... [more]
A2Q4J6_MEDTR3.029e-1371.15Tetratricopeptide-like helical OS=Medicago truncat... [more]
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BLAST of FG531832 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
CPSF2_ARATH6.674e-2382.26Cleavage and polyadenylation specificity factor su... [more]
CPSF2_ORYSJ1.487e-2278.69Cleavage and polyadenylation specificity factor su... [more]
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BLAST of FG531832 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G23880.17.570e-2482.26| Symbols: EMB1265, CPSF100, ESP5, ATCPSF100 | cle... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11203CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTORcoord: 3..63
score: 1.1
NoneNo IPR availablePANTHERPTHR11203:SF5CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR, 100 KDA SUBUNITcoord: 3..63
score: 1.1
NoneNo IPR availableSEGsegsegcoord: 9..24
score
NoneNo IPR availableSEGsegsegcoord: 17..30
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG531832 ID=FG531832; Name=FG531832; organism=Pisum sativum; type=EST; length=405bp
ACCACAGGCATTCCGGTGGAGTTTGCTGGCGGGGCTTTGCGTTGCGGTGA
ATACGTAACTGTTCGGAAGGTTGGGGATGCAACTCAGAAGGGTGCTGGTT
CTGGTACTCAGCAAATTATTATTGAAGGTCCCCTTTGTGAAGATTACTAT
AAAATTCGCGATTATCTCTATTCACAGTTTTATTTGCTTTAGATTTTGTT
GTACAAGTGCATAGGCTAATCATGAATGTCTTACCTTCCCTGCCCTATTT
TGCGAAGAAGGCAGGCTATGTAGAAGCTTGCAAACATGGTCAATTCTGTA
ACCATTCTAACAAATTCACAGGGGTTGTTATCTGATTTGAAAGCTTTCAA
TGAAGAAATCACTCTATTATTCTCAGTTTGTACCTCAATATCACATCAAC
TATCA
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