FG532846
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG532846 vs. TrEMBL
Match: D7MRC5_ARALY (Pentatricopeptide repeat-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494320 PE=4 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 8.851e-49 Identity = 98/175 (56.00%), Postives = 118/175 (67.43%), Query Frame = 3 Query: 3 VMGCTCLIQCLGKAMEIDALVRVFDIYVEKGVKPDDRXXXXXXXXXXXXXXXKDQEKVLACLQRANPKLVAFIQLIADEQTSFETVKEEFKGIMSNAVVEVRRPFCNCLIDICRNKDLLERAHDXXXXXXXXXXXXXXXHKSQHQWCLDVRTLSVGAALTALEEWMTTLTKLVKR 527 VMGCTCL+QCLGKA ID LV VFD+ +++GVKPDDR +D EKV+ACL+RAN KLV F+ LI DE+T FETVKEEFK +++ VE RRPFCNCLIDICR K ERAH+ +K+ +W LDVR+LSVGAA TALEEWM TL ++KR Sbjct: 467 VMGCTCLVQCLGKAKRIDDLVYVFDLSIQRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANRKLVTFVNLIVDEKTEFETVKEEFKLVINATQVEARRPFCNCLIDICRGKKRHERAHELLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKR 641
BLAST of FG532846 vs. TrEMBL
Match: B9S1H7_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0865070 PE=4 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 5.937e-45 Identity = 93/170 (54.71%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 18 CLIQCLGKAMEIDALVRVFDIYVEKGVKPDDRXXXXXXXXXXXXXXXKDQEKVLACLQRANPKLVAFIQLIADEQTSFETVKEEFKGIMSNAVVEVRRPFCNCLIDICRNKDLLERAHDXXXXXXXXXXXXXXXHKSQHQWCLDVRTLSVGAALTALEEWMTTLTKLVKR 527 C CLGKA +D LVRVF+ +E+GV PDDR +D +KVLACLQ ANPKLVA ++LIA+E++SFETVKEEFK I+S+ VE RRPFCNCLID+CRN++L RAH+ +K++ +W LDVR+LSVGAA TALEEWM TL K V+R Sbjct: 439 CSQICLGKANRVDDLVRVFNFSMERGVNPDDRLCGCLLSVVSLCEESEDVDKVLACLQVANPKLVALVKLIAEEESSFETVKEEFKAIVSDTAVEARRPFCNCLIDVCRNRNLHGRAHELLYLGSLYGLYPDLHNKTEDEWSLDVRSLSVGAAHTALEEWMGTLVKFVQR 608
BLAST of FG532846 vs. TrEMBL
Match: B9MTZ9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_589987 PE=4 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 6.808e-33 Identity = 72/151 (47.68%), Postives = 96/151 (63.58%), Query Frame = 3 Query: 24 IQCLGKAMEIDALVRVFDIYVEKGVKPDDRXXXXXXXXXXXXXXXKDQEKVLACLQRANPKLVAFIQLIADEQTSFETVKEEFKGIMSNAVVEVRRPFCNCLIDICRNKDLLERAHDXXXXXXXXXXXXXXXHKSQHQWCLDVRTLSVGAA 476 + LG+ E LV+VF++ ++ GVK DDR +D KVLACLQ+ANPKLVA ++L DE+TSFET+KEEF+ ++S+A +E RRPFC CLIDICR +DL RAH+ HK+ +W L+VR+LSVGAA Sbjct: 7 LSALGRLEESLTLVKVFNVAIDGGVKLDDRFCGCLLSVASLSDESEDVAKVLACLQQANPKLVALVKLFEDEETSFETLKEEFRAVVSDAAIETRRPFCKCLIDICRKRDLHGRAHELLYLGILHGLYPDLHHKTVKEWSLNVRSLSVGAA 157
BLAST of FG532846 vs. TrEMBL
Match: C0PHT9_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.506e-27 Identity = 65/172 (37.79%), Postives = 97/172 (56.40%), Query Frame = 3 Query: 3 VMGCTCLIQCLGKAMEIDALVRVFDIYVEKGVKPDDRXXXXXXXXXXXXXXXKDQEKVLACLQRANPKLVAFIQLIADEQTSFETVKEEFKGIMSNAVVEVRRPFCNCLIDICRNKDL-LERAHDXXXXXXXXXXXXXXXHKSQHQWCLDVRTLSVGAALTALEEWMTTLTK 515 +M T +IQCLGKA I V V + +EKG+KPDDR ++ E VL+ L++ N LV I+++ D Q + + EE K ++++A EVRRP+CNCLID+CRN +RA + + +W LD+R+LSVGAA TA ++WM T+++ Sbjct: 260 IMSYTIVIQCLGKARRIQQAVEVLESGLEKGLKPDDRLCGCLLSVIALSSG-EEMEMVLSSLEKVNQNLVKLIRVLGDAQVGGDDITEELKSVLNSAAPEVRRPYCNCLIDVCRNHGFPPQRAREVFHLAQTYGLYSKLQSRKDEEWSLDLRSLSVGAAKTAFDDWMQTVSE 430
BLAST of FG532846 vs. TrEMBL
Match: B7ZXQ1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.506e-27 Identity = 65/172 (37.79%), Postives = 97/172 (56.40%), Query Frame = 3 Query: 3 VMGCTCLIQCLGKAMEIDALVRVFDIYVEKGVKPDDRXXXXXXXXXXXXXXXKDQEKVLACLQRANPKLVAFIQLIADEQTSFETVKEEFKGIMSNAVVEVRRPFCNCLIDICRNKDL-LERAHDXXXXXXXXXXXXXXXHKSQHQWCLDVRTLSVGAALTALEEWMTTLTK 515 +M T +IQCLGKA I V V + +EKG+KPDDR ++ E VL+ L++ N LV I+++ D Q + + EE K ++++A EVRRP+CNCLID+CRN +RA + + +W LD+R+LSVGAA TA ++WM T+++ Sbjct: 472 IMSYTIVIQCLGKARRIQQAVEVLESGLEKGLKPDDRLCGCLLSVIALSSG-EEMEMVLSSLEKVNQNLVKLIRVLGDAQVGGDDITEELKSVLNSAAPEVRRPYCNCLIDVCRNHGFPPQRAREVFHLAQTYGLYSKLQSRKDEEWSLDLRSLSVGAAKTAFDDWMQTVSE 642
BLAST of FG532846 vs. TrEMBL
Match: B4F8M2_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.506e-27 Identity = 65/172 (37.79%), Postives = 97/172 (56.40%), Query Frame = 3 Query: 3 VMGCTCLIQCLGKAMEIDALVRVFDIYVEKGVKPDDRXXXXXXXXXXXXXXXKDQEKVLACLQRANPKLVAFIQLIADEQTSFETVKEEFKGIMSNAVVEVRRPFCNCLIDICRNKDL-LERAHDXXXXXXXXXXXXXXXHKSQHQWCLDVRTLSVGAALTALEEWMTTLTK 515 +M T +IQCLGKA I V V + +EKG+KPDDR ++ E VL+ L++ N LV I+++ D Q + + EE K ++++A EVRRP+CNCLID+CRN +RA + + +W LD+R+LSVGAA TA ++WM T+++ Sbjct: 472 IMSYTIVIQCLGKARRIQQAVEVLESGLEKGLKPDDRLCGCLLSVIALSSG-EEMEMVLSSLEKVNQNLVKLIRVLGDAQVGGDDITEELKSVLNSAAPEVRRPYCNCLIDVCRNHGFPPQRAREVFHLAQTYGLYSKLQSRKDEEWSLDLRSLSVGAAKTAFDDWMQTVSE 642
BLAST of FG532846 vs. TrEMBL
Match: Q75IP8_ORYSJ (Pentatricopeptide, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g63910 PE=4 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.583e-27 Identity = 67/170 (39.41%), Postives = 95/170 (55.88%), Query Frame = 3 Query: 3 VMGCTCLIQCLGKAMEIDALVRVFDIYVEKGVKPDDRXXXXXXXXXXXXXXXKDQEKVLACLQRANPKLVAFIQLIADEQTSFETVKEEFKGIMSNAVVEVRRPFCNCLIDICRNKDL-LERAHDXXXXXXXXXXXXXXXHKSQHQWCLDVRTLSVGAALTALEEWMTTL 509 +M T +IQCLGKA I V V + + KG+KPDDR + E +LACL++ LV I+++ D + E ++ E KGI+++A EVRRP+CNCLIDICRN ERA + + + +W LD+R+LSVGAA TA ++WM T+ Sbjct: 457 IMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPDDRLCGCLLSVVALSSGD-ETEVILACLEKVRSNLVKLIRMLGDARVGVEDLRVELKGILNSAAPEVRRPYCNCLIDICRNHGYPSERAVELFRLARHYGLYSKIHTRKEEEWSLDLRSLSVGAAKTAFDDWMKTI 625
BLAST of FG532846 vs. TrEMBL
Match: Q75IP7_ORYSJ (Os03g0856100 protein OS=Oryza sativa subsp. japonica GN=Os03g0856100 PE=4 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.583e-27 Identity = 67/170 (39.41%), Postives = 95/170 (55.88%), Query Frame = 3 Query: 3 VMGCTCLIQCLGKAMEIDALVRVFDIYVEKGVKPDDRXXXXXXXXXXXXXXXKDQEKVLACLQRANPKLVAFIQLIADEQTSFETVKEEFKGIMSNAVVEVRRPFCNCLIDICRNKDL-LERAHDXXXXXXXXXXXXXXXHKSQHQWCLDVRTLSVGAALTALEEWMTTL 509 +M T +IQCLGKA I V V + + KG+KPDDR + E +LACL++ LV I+++ D + E ++ E KGI+++A EVRRP+CNCLIDICRN ERA + + + +W LD+R+LSVGAA TA ++WM T+ Sbjct: 397 IMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPDDRLCGCLLSVVALSSGD-ETEVILACLEKVRSNLVKLIRMLGDARVGVEDLRVELKGILNSAAPEVRRPYCNCLIDICRNHGYPSERAVELFRLARHYGLYSKIHTRKEEEWSLDLRSLSVGAAKTAFDDWMKTI 565
BLAST of FG532846 vs. TrEMBL
Match: B8ANR5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14394 PE=4 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.583e-27 Identity = 67/170 (39.41%), Postives = 95/170 (55.88%), Query Frame = 3 Query: 3 VMGCTCLIQCLGKAMEIDALVRVFDIYVEKGVKPDDRXXXXXXXXXXXXXXXKDQEKVLACLQRANPKLVAFIQLIADEQTSFETVKEEFKGIMSNAVVEVRRPFCNCLIDICRNKDL-LERAHDXXXXXXXXXXXXXXXHKSQHQWCLDVRTLSVGAALTALEEWMTTL 509 +M T +IQCLGKA I V V + + KG+KPDDR + E +LACL++ LV I+++ D + E ++ E KGI+++A EVRRP+CNCLIDICRN ERA + + + +W LD+R+LSVGAA TA ++WM T+ Sbjct: 460 IMSYTIVIQCLGKAGRIQEAVDVLEAGMAKGLKPDDRLCGCLLSVVALSSGD-ETEVILACLEKVRSNLVKLIRMLGDARVGVEDLRVELKGILNSAAPEVRRPYCNCLIDICRNHGYPSERAVELFRLARHYGLYSKIHTRKEEEWSLDLRSLSVGAAKTAFDDWMKTI 628
BLAST of FG532846 vs. TrEMBL
Match: C5WRY5_SORBI (Putative uncharacterized protein Sb01g000640 OS=Sorghum bicolor GN=Sb01g000640 PE=4 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.291e-27 Identity = 65/172 (37.79%), Postives = 97/172 (56.40%), Query Frame = 3 Query: 3 VMGCTCLIQCLGKAMEIDALVRVFDIYVEKGVKPDDRXXXXXXXXXXXXXXXKDQEKVLACLQRANPKLVAFIQLIADEQTSFETVKEEFKGIMSNAVVEVRRPFCNCLIDICRNKDL-LERAHDXXXXXXXXXXXXXXXHKSQHQWCLDVRTLSVGAALTALEEWMTTLTK 515 +M T +IQCLGKA I V V + +EKG+KPDDR ++ E VL+ LQ+ N LV I++++D Q + + +E K +++ A EVRRP+CNCLID+CRN +RA + + +W LD+R+LSVGAA TA ++WM T+++ Sbjct: 478 IMSYTIVIQCLGKAQRIQQAVEVLEAGLEKGLKPDDRLCGCLLSVIALSSG-EEMEIVLSSLQKFNQNLVKLIRVLSDAQVGADDITKELKSVLNAAAPEVRRPYCNCLIDVCRNHGFPPQRAREVFHLAQTYGLYTKLQSRKDEEWSLDLRSLSVGAAKTAFDDWMQTVSE 648
BLAST of FG532846 vs. SwissProt
Match: PP420_ARATH (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana GN=At5g46580 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 7.664e-49 Identity = 95/175 (54.29%), Postives = 118/175 (67.43%), Query Frame = 3 Query: 3 VMGCTCLIQCLGKAMEIDALVRVFDIYVEKGVKPDDRXXXXXXXXXXXXXXXKDQEKVLACLQRANPKLVAFIQLIADEQTSFETVKEEFKGIMSNAVVEVRRPFCNCLIDICRNKDLLERAHDXXXXXXXXXXXXXXXHKSQHQWCLDVRTLSVGAALTALEEWMTTLTKLVKR 527 VMGCTCL+QCLGKA ID +V VFD+ +++GVKPDDR +D EKV+ACL+RAN KLV F+ LI DE+T +ETVKEEFK +++ VE RRPFCNCLIDICR + ERAH+ +K+ +W LDVR+LSVGAA TALEEWM TL ++KR Sbjct: 467 VMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKR 641
BLAST of FG532846 vs. SwissProt
Match: PP314_ARATH (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana GN=P67 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.232e-22 Identity = 59/168 (35.12%), Postives = 94/168 (55.95%), Query Frame = 3 Query: 15 TCLIQCLGKAMEIDALVRVFDIYVEKGVKPDDRXXXXXXXXXXXXXXXKDQEKVLACLQRANPKLVAFIQLIADEQTSFETV-KEEFKGIMSNAVVEVRRPFCNCLIDICRNKDLLERAHDXXXXXXXXXXXXXXXHKSQHQWCLDVRTLSVGAALTALEEWMTTLTK 515 T +IQC GKA ++D +VR FD +E G+ PDDR ++ K++ C+++A PKL ++++ +EQ E V K+E ++ + +V++ + NCLID+C N + LERA + KS QW L +++LS+GAALTAL WM L++ Sbjct: 446 TSVIQCYGKAKQVDDVVRTFDQVLELGITPDDR-FCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSE 612
BLAST of FG532846 vs. TAIR peptide
Match: AT5G46580.1 (| Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr5:18897510-18899645 REVERSE LENGTH=711) HSP 1 Score: 192.971 bits (489), Expect = 8.262e-50 Identity = 95/175 (54.29%), Postives = 118/175 (67.43%), Query Frame = 3 Query: 3 VMGCTCLIQCLGKAMEIDALVRVFDIYVEKGVKPDDRXXXXXXXXXXXXXXXKDQEKVLACLQRANPKLVAFIQLIADEQTSFETVKEEFKGIMSNAVVEVRRPFCNCLIDICRNKDLLERAHDXXXXXXXXXXXXXXXHKSQHQWCLDVRTLSVGAALTALEEWMTTLTKLVKR 527 VMGCTCL+QCLGKA ID +V VFD+ +++GVKPDDR +D EKV+ACL+RAN KLV F+ LI DE+T +ETVKEEFK +++ VE RRPFCNCLIDICR + ERAH+ +K+ +W LDVR+LSVGAA TALEEWM TL ++KR Sbjct: 467 VMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKR 641
BLAST of FG532846 vs. TAIR peptide
Match: AT4G16390.1 (| Symbols: SVR7 | pentatricopeptide (PPR) repeat-containing protein | chr4:9257985-9260093 FORWARD LENGTH=702) HSP 1 Score: 105.916 bits (263), Expect = 1.328e-23 Identity = 59/168 (35.12%), Postives = 94/168 (55.95%), Query Frame = 3 Query: 15 TCLIQCLGKAMEIDALVRVFDIYVEKGVKPDDRXXXXXXXXXXXXXXXKDQEKVLACLQRANPKLVAFIQLIADEQTSFETV-KEEFKGIMSNAVVEVRRPFCNCLIDICRNKDLLERAHDXXXXXXXXXXXXXXXHKSQHQWCLDVRTLSVGAALTALEEWMTTLTK 515 T +IQC GKA ++D +VR FD +E G+ PDDR ++ K++ C+++A PKL ++++ +EQ E V K+E ++ + +V++ + NCLID+C N + LERA + KS QW L +++LS+GAALTAL WM L++ Sbjct: 460 TSVIQCYGKAKQVDDVVRTFDQVLELGITPDDR-FCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSE 626 The following BLAST results are available for this feature:
BLAST of FG532846 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of FG532846 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 2
BLAST of FG532846 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG532846 ID=FG532846; Name=FG532846; organism=Pisum sativum; type=EST; length=530bpback to top |