FG532947

EST Overview
NameFG532947
Unique NameFG532947
TypeEST
OrganismPisum sativum (pea)
Sequence length413
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG532947 vs. TrEMBL
Match: B9N2P5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_580093 PE=4 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.932e-36
Identity = 84/137 (61.31%), Postives = 97/137 (70.80%), Query Frame = 2
Query:    2 IRAEMEASKLSASESVTXXXXXXXXXXXXXXXXXXXXXQKAKLQKEVSNMKEKISEAQEVLGQTSQRQKEAEVKWKEELKAQEDALALVEEERRAKETAESNNKRGFEALRLKIDIDFQRHKDDLRRLEHDLSRLKA 412
            IRAEMEASKLSASESVT                     QK KLQ E+++ KEKI E Q  LG+  Q QKEAEVKW++E+KA+E AL LVEEER AKE AE+ NKR  EALRLKI+IDFQRHKDDL+RLE + SRLK+
Sbjct:  486 IRAEMEASKLSASESVTTCLEVAKREKKCLKRLLAWEKQKTKLQAEIADEKEKIKELQRCLGKIEQAQKEAEVKWRQEMKAKEQALTLVEEERCAKEAAEAENKRKLEALRLKIEIDFQRHKDDLQRLEQEFSRLKS 622          
BLAST of FG532947 vs. TrEMBL
Match: B9S1H3_RICCO (Synaptonemal complex protein, putative OS=Ricinus communis GN=RCOM_0865020 PE=4 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.084e-34
Identity = 79/137 (57.66%), Postives = 94/137 (68.61%), Query Frame = 2
Query:    2 IRAEMEASKLSASESVTXXXXXXXXXXXXXXXXXXXXXQKAKLQKEVSNMKEKISEAQEVLGQTSQRQKEAEVKWKEELKAQEDALALVEEERRAKETAESNNKRGFEALRLKIDIDFQRHKDDLRRLEHDLSRLKA 412
            IRAEMEASKLS+SES +                     QK KLQ E+++ KEKI E Q  L    Q QKEAE KW++E+K +E  LA VEEERR+KE AE++NKR  EALRLKI+IDFQRHKDDL+RLE +LSRLKA
Sbjct:  538 IRAEMEASKLSSSESTSTCMEAVKREKKWLKKLLAWEKQKTKLQDEIADEKEKIKELQRCLAMVEQAQKEAEAKWRQEVKVKEQVLAQVEEERRSKEAAEASNKRKLEALRLKIEIDFQRHKDDLQRLEQELSRLKA 674          
BLAST of FG532947 vs. TrEMBL
Match: D7TTZ1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_12.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00013185001 PE=4 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 8.974e-34
Identity = 80/136 (58.82%), Postives = 94/136 (69.12%), Query Frame = 2
Query:    2 IRAEMEASKLSASESVTXXXXXXXXXXXXXXXXXXXXXQKAKLQKEVSNMKEKISEAQEVLGQTSQRQKEAEVKWKEELKAQEDALALVEEERRAKETAESNNKRGFEALRLKIDIDFQRHKDDLRRLEHDLSRLK 409
            IRAEMEASKLSASESV                      QK KLQ+E+   K KI + Q+ + +  Q QKEAEVKW+++LKA+E A   VEEERRAKE AE+NNKR  EALRLKI+IDFQRHKDDL+RLE +LSRLK
Sbjct:   73 IRAEMEASKLSASESVLTCLEVAKREKKCLKRLLAWEKQKTKLQEEIGEEKRKIVDLQQQMVRVEQAQKEAEVKWRQDLKAKELAFVQVEEERRAKEAAEANNKRKLEALRLKIEIDFQRHKDDLQRLEQELSRLK 208          
BLAST of FG532947 vs. TrEMBL
Match: B9MU03_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_589991 PE=4 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.531e-33
Identity = 79/137 (57.66%), Postives = 93/137 (67.88%), Query Frame = 2
Query:    2 IRAEMEASKLSASESVTXXXXXXXXXXXXXXXXXXXXXQKAKLQKEVSNMKEKISEAQEVLGQTSQRQKEAEVKWKEELKAQEDALALVEEERRAKETAESNNKRGFEALRLKIDIDFQRHKDDLRRLEHDLSRLKA 412
            IRAEMEASKLSASESVT                     QK KLQ E+++ KEKI E Q+ L      QKEAEVKW+ E+KA+E ALALVEEER +KE  E+ NKR  +ALR KI+IDFQRHKDDL+RLE + SRLK+
Sbjct:  475 IRAEMEASKLSASESVTTCLEVAKREKKCLKRLLAWEKQKTKLQAEIADEKEKIKELQQCLANIEHAQKEAEVKWRHEVKAKEQALALVEEERCSKEATEAENKRKLDALRRKIEIDFQRHKDDLQRLEQEFSRLKS 611          
BLAST of FG532947 vs. TrEMBL
Match: Q8L7B1_ARATH (Putative uncharacterized protein At2g35330 OS=Arabidopsis thaliana GN=At2g35330 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 9.287e-31
Identity = 74/135 (54.81%), Postives = 90/135 (66.67%), Query Frame = 2
Query:    2 IRAEMEASKLSASESVTXXXXXXXXXXXXXXXXXXXXXQKAKLQKEVSNMKEKISEAQEVLGQTSQRQKEAEVKWKEELKAQEDALALVEEERRAKETAESNNKRGFEALRLKIDIDFQRHKDDLRRLEHDLSRL 406
            IRAEMEASKLSASES+T                     QK KLQ E++  KEKI      L Q +Q +KE E KW++E KA+E  LA VEEE+R+KE  E++NKR  E+LRLKI+IDFQRHKDDL+RLE +LSRL
Sbjct:  496 IRAEMEASKLSASESLTACMEASKKEKKCLKKLLAWEKQKMKLQDEITAEKEKIKALNRALAQITQEEKEYEAKWRQEQKAKEQVLAQVEEEQRSKEAIEASNKRKVESLRLKIEIDFQRHKDDLQRLEQELSRL 630          
BLAST of FG532947 vs. TrEMBL
Match: O82304_ARATH (Putative uncharacterized protein At2g35330 OS=Arabidopsis thaliana GN=At2g35330 PE=4 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 9.287e-31
Identity = 74/135 (54.81%), Postives = 90/135 (66.67%), Query Frame = 2
Query:    2 IRAEMEASKLSASESVTXXXXXXXXXXXXXXXXXXXXXQKAKLQKEVSNMKEKISEAQEVLGQTSQRQKEAEVKWKEELKAQEDALALVEEERRAKETAESNNKRGFEALRLKIDIDFQRHKDDLRRLEHDLSRL 406
            IRAEMEASKLSASES+T                     QK KLQ E++  KEKI      L Q +Q +KE E KW++E KA+E  LA VEEE+R+KE  E++NKR  E+LRLKI+IDFQRHKDDL+RLE +LSRL
Sbjct:  469 IRAEMEASKLSASESLTACMEASKKEKKCLKKLLAWEKQKMKLQDEITAEKEKIKALNRALAQITQEEKEYEAKWRQEQKAKEQVLAQVEEEQRSKEAIEASNKRKVESLRLKIEIDFQRHKDDLQRLEQELSRL 603          
BLAST of FG532947 vs. TrEMBL
Match: A5ANR3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004428 PE=4 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.303e-28
Identity = 64/98 (65.31%), Postives = 78/98 (79.59%), Query Frame = 2
Query:  116 QKAKLQKEVSNMKEKISEAQEVLGQTSQRQKEAEVKWKEELKAQEDALALVEEERRAKETAESNNKRGFEALRLKIDIDFQRHKDDLRRLEHDLSRLK 409
            QK KLQ+E+   K KI + Q+ + +  Q QKEAEVKW+++LKA+E A   VEEERRAKE AE+NNKR  EALRLKI+IDFQRHKDDL+RLE +LSRLK
Sbjct:  479 QKTKLQEEIGEEKRKIVDLQQQMVRVEQAQKEAEVKWRQDLKAKELAFVQVEEERRAKEAAEANNKRKLEALRLKIEIDFQRHKDDLQRLEQELSRLK 576          
BLAST of FG532947 vs. TrEMBL
Match: D7KHL3_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_680999 PE=4 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.611e-28
Identity = 68/137 (49.64%), Postives = 88/137 (64.23%), Query Frame = 2
Query:    2 IRAEMEASKLSASESVTXXXXXXXXXXXXXXXXXXXXXQKAKLQKEVSNMKEKISEAQEVLGQTSQRQKEAEVKWKEELKAQEDALALVEEERRAKETAESNNKRGFEALRLKIDIDFQRHKDDLRRLEHDLSRLKA 412
            IRAE E SKLSASES+                      QK K+Q +++  KE I      L Q +Q +KE E KW++E KA+E+ALA +EEE+R+KE AE +NKR  E LRLKI++DFQRHKDD +RLE +LSRL+A
Sbjct:  473 IRAEREGSKLSASESLKACMDASKKEKKILKKLVAWEKQKLKVQDDIAAEKENIKALYRTLAQITQDEKEIEAKWRQEQKAKEEALAQMEEEQRSKEAAEGHNKRKLETLRLKIELDFQRHKDDHQRLEQELSRLQA 609          
BLAST of FG532947 vs. TrEMBL
Match: A9SWJ7_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234252 PE=4 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.450e-23
Identity = 60/137 (43.80%), Postives = 88/137 (64.23%), Query Frame = 2
Query:    2 IRAEMEASKLSASESVTXXXXXXXXXXXXXXXXXXXXXQKAKLQKEVSNMKEKISEAQEVLGQTSQRQKEAEVKWKEELKAQEDALALVEEERRAKETAESNNKRGFEALRLKIDIDFQRHKDDLRRLEHDLSRLKA 412
            +RAEMEA+KLSA+ESV                      QKAKLQ+E+S  K K+++ Q+ L Q ++R  +AEV+W++E KA+E+A+A  ++E+RAKE AE+  KR  E  R K++ D QR +DD+ RL  +LS L+A
Sbjct:  213 VRAEMEAAKLSAAESVAIYQEVAKREKKGAKRAQGWEKQKAKLQEELSEEKRKLAQLQQALAQANERHLQAEVRWRQEEKAKEEAIARADKEKRAKEQAEAAFKRREEVTRRKVEQDKQRLRDDVERLTQELSTLRA 349          
BLAST of FG532947 vs. TrEMBL
Match: C5XBC6_SORBI (Putative uncharacterized protein Sb02g023390 OS=Sorghum bicolor GN=Sb02g023390 PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.244e-19
Identity = 53/136 (38.97%), Postives = 85/136 (62.50%), Query Frame = 2
Query:    2 IRAEMEASKLSASESVTXXXXXXXXXXXXXXXXXXXXXQKAKLQKEVSNMKEKISEAQEVLGQTSQRQKEAEVKWKEELKAQEDALALVEEERRAKETAESNNKRGFEALRLKIDIDFQRHKDDLRRLEHDLSRLK 409
            IRAEMEA+KLSASE+                       QKAKL++++++ K KI++A+  L + ++  K  E K +E+ + +E+ + L+EEERR KE A++++ R  E LR K +++ Q +KDDL RL+ +LSRL+
Sbjct:  398 IRAEMEAAKLSASETEKQCQGLLRKEKKDSKRLEVWERQKAKLKEDIADCKTKITQAERELAEVNKAIKNMEKKIREDTRVKEENMVLLEEERRKKEAAKADSDRRLEELRRKKEVESQCYKDDLHRLQDELSRLQ 533          
BLAST of FG532947 vs. SwissProt
Match: MIP1_ARATH (MND1-interacting protein 1 OS=Arabidopsis thaliana GN=MIP1 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.625e-29
Identity = 69/137 (50.36%), Postives = 88/137 (64.23%), Query Frame = 2
Query:    2 IRAEMEASKLSASESVTXXXXXXXXXXXXXXXXXXXXXQKAKLQKEVSNMKEKISEAQEVLGQTSQRQKEAEVKWKEELKAQEDALALVEEERRAKETAESNNKRGFEALRLKIDIDFQRHKDDLRRLEHDLSRLKA 412
            IRAE E SKLSASES+                      Q  KLQ E++  KEKI    + L Q ++ +KE E KW++E KA+E+ALA +EEE+R+KE AE +NKR  E LRLKI++DFQRHKDD +RLE +L RLKA
Sbjct:  469 IRAEREGSKLSASESLKACMEASKKEKKCLKKLVAWEKQILKLQDEITAEKEKIKALYKTLAQITEYEKEIEAKWRQEQKAKEEALAQMEEEQRSKEAAEGHNKRKLETLRLKIELDFQRHKDDHQRLEQELGRLKA 605          
BLAST of FG532947 vs. SwissProt
Match: RF4_ARATH (Putative E3 ubiquitin-protein ligase RF4 OS=Arabidopsis thaliana GN=RF4 PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 4.607e-8
Identity = 36/136 (26.47%), Postives = 64/136 (47.06%), Query Frame = 2
Query:    2 IRAEMEASKLSASESVTXXXXXXXXXXXXXXXXXXXXXQKAKLQKEVSNMKEKISEAQEVLGQTSQRQKEAEVKWKEELKAQEDALALVEEERRAKETAESNNKRGFEALRLKIDIDFQRHKDDLRRLEHDLSRLK 409
            ++ EMEA+K+ A ES                       QK  LQ+E+   +EK++  Q+ + +   RQ + E   K+E  A+    A     R+  +  E+  K   E ++ K + D + + D+++RLE ++S LK
Sbjct:  596 LKKEMEAAKIKAVESAESFREAKERGERSLKDIHSWEGQKIMLQEELKGQREKVTVLQKEVTKAKNRQNQIEAALKQERTAKGKLSAQASLIRKETKELEALGKVEEERIKGKAETDVKYYIDNIKRLEREISELK 731          
BLAST of FG532947 vs. TAIR peptide
Match: AT2G35330.2 (| Symbols: | RING/U-box superfamily protein | chr2:14869260-14871673 FORWARD LENGTH=711)

HSP 1 Score: 136.346 bits (342), Expect = 5.327e-33
Identity = 74/135 (54.81%), Postives = 90/135 (66.67%), Query Frame = 2
Query:    2 IRAEMEASKLSASESVTXXXXXXXXXXXXXXXXXXXXXQKAKLQKEVSNMKEKISEAQEVLGQTSQRQKEAEVKWKEELKAQEDALALVEEERRAKETAESNNKRGFEALRLKIDIDFQRHKDDLRRLEHDLSRL 406
            IRAEMEASKLSASES+T                     QK KLQ E++  KEKI      L Q +Q +KE E KW++E KA+E  LA VEEE+R+KE  E++NKR  E+LRLKI+IDFQRHKDDL+RLE +LSRL
Sbjct:  469 IRAEMEASKLSASESLTACMEASKKEKKCLKKLLAWEKQKMKLQDEITAEKEKIKALNRALAQITQEEKEYEAKWRQEQKAKEQVLAQVEEEQRSKEAIEASNKRKVESLRLKIEIDFQRHKDDLQRLEQELSRL 603          
BLAST of FG532947 vs. TAIR peptide
Match: AT2G35330.1 (| Symbols: | RING/U-box superfamily protein | chr2:14869179-14871673 FORWARD LENGTH=738)

HSP 1 Score: 136.346 bits (342), Expect = 5.327e-33
Identity = 74/135 (54.81%), Postives = 90/135 (66.67%), Query Frame = 2
Query:    2 IRAEMEASKLSASESVTXXXXXXXXXXXXXXXXXXXXXQKAKLQKEVSNMKEKISEAQEVLGQTSQRQKEAEVKWKEELKAQEDALALVEEERRAKETAESNNKRGFEALRLKIDIDFQRHKDDLRRLEHDLSRL 406
            IRAEMEASKLSASES+T                     QK KLQ E++  KEKI      L Q +Q +KE E KW++E KA+E  LA VEEE+R+KE  E++NKR  E+LRLKI+IDFQRHKDDL+RLE +LSRL
Sbjct:  496 IRAEMEASKLSASESLTACMEASKKEKKCLKKLLAWEKQKMKLQDEITAEKEKIKALNRALAQITQEEKEYEAKWRQEQKAKEQVLAQVEEEQRSKEAIEASNKRKVESLRLKIEIDFQRHKDDLQRLEQELSRL 630          
BLAST of FG532947 vs. TAIR peptide
Match: AT1G32530.1 (| Symbols: | RING/U-box superfamily protein | chr1:11759666-11762386 REVERSE LENGTH=711)

HSP 1 Score: 126.716 bits (317), Expect = 4.221e-30
Identity = 69/137 (50.36%), Postives = 88/137 (64.23%), Query Frame = 2
Query:    2 IRAEMEASKLSASESVTXXXXXXXXXXXXXXXXXXXXXQKAKLQKEVSNMKEKISEAQEVLGQTSQRQKEAEVKWKEELKAQEDALALVEEERRAKETAESNNKRGFEALRLKIDIDFQRHKDDLRRLEHDLSRLKA 412
            IRAE E SKLSASES+                      Q  KLQ E++  KEKI    + L Q ++ +KE E KW++E KA+E+ALA +EEE+R+KE AE +NKR  E LRLKI++DFQRHKDD +RLE +L RLKA
Sbjct:  469 IRAEREGSKLSASESLKACMEASKKEKKCLKKLVAWEKQILKLQDEITAEKEKIKALYKTLAQITEYEKEIEAKWRQEQKAKEEALAQMEEEQRSKEAAEGHNKRKLETLRLKIELDFQRHKDDHQRLEQELGRLKA 605          
BLAST of FG532947 vs. TAIR peptide
Match: AT1G03365.1 (| Symbols: | RING/U-box superfamily protein | chr1:827182-830191 FORWARD LENGTH=823)

HSP 1 Score: 56.6102 bits (135), Expect = 5.364e-9
Identity = 36/136 (26.47%), Postives = 64/136 (47.06%), Query Frame = 2
Query:    2 IRAEMEASKLSASESVTXXXXXXXXXXXXXXXXXXXXXQKAKLQKEVSNMKEKISEAQEVLGQTSQRQKEAEVKWKEELKAQEDALALVEEERRAKETAESNNKRGFEALRLKIDIDFQRHKDDLRRLEHDLSRLK 409
            ++ EMEA+K+ A ES                       QK  LQ+E+   +EK++  Q+ + +   RQ + E   K+E  A+    A     R+  +  E+  K   E ++ K + D + + D+++RLE ++S LK
Sbjct:  596 LKKEMEAAKIKAVESAESFREAKERGERSLKDIHSWEGQKIMLQEELKGQREKVTVLQKEVTKAKNRQNQIEAALKQERTAKGKLSAQASLIRKETKELEALGKVEEERIKGKAETDVKYYIDNIKRLEREISELK 731          
The following BLAST results are available for this feature:
BLAST of FG532947 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9N2P5_POPTR1.932e-3661.31Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9S1H3_RICCO3.084e-3457.66Synaptonemal complex protein, putative OS=Ricinus ... [more]
D7TTZ1_VITVI8.974e-3458.82Whole genome shotgun sequence of line PN40024, sca... [more]
B9MU03_POPTR1.531e-3357.66Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q8L7B1_ARATH9.287e-3154.81Putative uncharacterized protein At2g35330 OS=Arab... [more]
O82304_ARATH9.287e-3154.81Putative uncharacterized protein At2g35330 OS=Arab... [more]
A5ANR3_VITVI3.303e-2865.31Putative uncharacterized protein OS=Vitis vinifera... [more]
D7KHL3_ARALY9.611e-2849.64Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
A9SWJ7_PHYPA2.450e-2343.80Predicted protein OS=Physcomitrella patens subsp. ... [more]
C5XBC6_SORBI6.244e-1938.97Putative uncharacterized protein Sb02g023390 OS=So... [more]
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BLAST of FG532947 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
MIP1_ARATH3.625e-2950.36MND1-interacting protein 1 OS=Arabidopsis thaliana... [more]
RF4_ARATH4.607e-826.47Putative E3 ubiquitin-protein ligase RF4 OS=Arabid... [more]
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BLAST of FG532947 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT2G35330.25.327e-3354.81| Symbols: | RING/U-box superfamily protein | chr... [more]
AT2G35330.15.327e-3354.81| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G32530.14.221e-3050.36| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G03365.15.364e-926.47| Symbols: | RING/U-box superfamily protein | chr... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 18..38
score
NoneNo IPR availableSEGsegsegcoord: 2..21
score: NAcoord: 38..55
score
NoneNo IPR availableSEGsegsegcoord: 30..39
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG532947 ID=FG532947; Name=FG532947; organism=Pisum sativum; type=EST; length=413bp
AATCAGAGCAGAGATGGAGGCTTCCAAATTAAGTGCATCAGAGTCCGTGA
CAGCTTGCTTAGAAGTTGCGAAAAAGGAGAAGAAGTGCTTAAAGAAACTT
CTAGCTTGGGAAAAACAGAAGGCTAAGCTACAGAAGGAAGTTTCCAATAT
GAAAGAGAAGATATCAGAGGCACAAGAAGTGTTGGGTCAGACTTCACAGC
GCCAAAAAGAAGCCGAGGTTAAATGGAAGGAGGAGTTGAAGGCTCAAGAA
GATGCCTTGGCACTAGTTGAGGAGGAGCGCCGAGCCAAGGAAACAGCTGA
ATCAAATAATAAGAGGGGATTTGAGGCTTTGCGTCTGAAGATTGACATAG
ATTTCCAGCGCCACAAGGATGATCTACGCAGACTTGAGCATGATCTTTCA
CGCCTTAAAGCAT
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