FG533355

EST Overview
NameFG533355
Unique NameFG533355
TypeEST
OrganismPisum sativum (pea)
Sequence length605
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG533355 vs. TrEMBL
Match: B9SJ58_RICCO (Prolactin regulatory element-binding protein, putative OS=Ricinus communis GN=RCOM_0843720 PE=4 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.302e-32
Identity = 65/106 (61.32%), Postives = 89/106 (83.96%), Query Frame = 1
Query:    4 TDKGGSILTWNTQTWERISSKYISRDAISAFNVSADGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLGIITALAFSPDSRALASVSWDSSARVTIIKEKKNGGLN 321
            TDKGGSI+TW+  +W RI SK+I+RD IS+FNVS DGKFLA GT +G+++++NST + +Q  ++KAHLG++TALAFS DSRAL S S DSSARVT++++ K+GGL+
Sbjct:  258 TDKGGSIVTWDASSWNRIGSKHITRDGISSFNVSPDGKFLAVGTSQGDVLLLNSTRVRVQKVVRKAHLGMVTALAFSHDSRALVSASLDSSARVTLVQDVKSGGLS 363          
BLAST of FG533355 vs. TrEMBL
Match: B9HJB9_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_418974 PE=4 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.438e-32
Identity = 63/100 (63.00%), Postives = 85/100 (85.00%), Query Frame = 1
Query:    4 TDKGGSILTWNTQTWERISSKYISRDAISAFNVSADGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLGIITALAFSPDSRALASVSWDSSARVTIIKEK 303
            TDKG SI+TWN  +W+R+SSK++ R+ +S+FN+S DGKFLA GT +G+++++NSTNM IQT I+KAHLGI+TAL FS DSRAL S S DSSARVT++++K
Sbjct:  257 TDKGSSIVTWNASSWKRVSSKHVFREPVSSFNISPDGKFLAIGTAQGDVMLINSTNMCIQTMIRKAHLGIVTALTFSHDSRALVSASMDSSARVTLVEDK 356          
BLAST of FG533355 vs. TrEMBL
Match: B9HW60_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_726875 PE=4 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.143e-31
Identity = 62/98 (63.27%), Postives = 84/98 (85.71%), Query Frame = 1
Query:    4 TDKGGSILTWNTQTWERISSKYISRDAISAFNVSADGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLGIITALAFSPDSRALASVSWDSSARVTIIK 297
            TDKG SI+TWNT +W+R+SSK+++R+ +S+FNVS DGK LA G  +G++++VNSTN+ +QT ++KAHLGI+TALAFS DSRAL S S DSSARVT+I+
Sbjct:  273 TDKGSSIVTWNTSSWKRMSSKHVAREPVSSFNVSPDGKLLAMGMTQGDVLLVNSTNLRVQTLVRKAHLGIVTALAFSHDSRALVSASMDSSARVTLIE 370          
BLAST of FG533355 vs. TrEMBL
Match: D7T8S7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011745001 PE=4 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.545e-30
Identity = 63/105 (60.00%), Postives = 82/105 (78.10%), Query Frame = 1
Query:    7 DKGGSILTWNTQTWERISSKYISRDAISAFNVSADGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLGIITALAFSPDSRALASVSWDSSARVTIIKEKKNGGLN 321
            D+G  I+TWNT TW+++ SK I RD+ISAF+VSADGK L+ GT +G+I+IVNS +M +Q  ++KAHLGI+T + FS DSRAL S S DSSARVT+IKE K  G +
Sbjct:  174 DRGACIVTWNTTTWKKVGSKQIVRDSISAFSVSADGKLLSVGTIQGDIVIVNSASMQVQAVVRKAHLGIVTTMRFSQDSRALVSASMDSSARVTVIKEMKKNGFS 278          
BLAST of FG533355 vs. TrEMBL
Match: Q9LUF6_ARATH (Protein transport protein SEC12p-like OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.540e-28
Identity = 63/101 (62.38%), Postives = 81/101 (80.20%), Query Frame = 1
Query:    4 TDKGGSILTWNTQTWERISSKYISRD-AISAFNVSADGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLGIITALAFSPDSRALASVSWDSSARVTIIKEK 303
            T +GGSI+TW+T +W R SSK I R+ +ISAFNVSADGK LA GT EG+++I++ST M     +KKAHLG++TAL FSPDSR L SVS+DS AR+T+IK+K
Sbjct:  250 TQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLLAVGTLEGDVLIIDSTKMQTNQIVKKAHLGLVTALTFSPDSRCLVSVSFDSRARLTVIKQK 350          
BLAST of FG533355 vs. TrEMBL
Match: Q9FGP3_ARATH (At5g50550 OS=Arabidopsis thaliana GN=At5g50550 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.540e-28
Identity = 63/101 (62.38%), Postives = 81/101 (80.20%), Query Frame = 1
Query:    4 TDKGGSILTWNTQTWERISSKYISRD-AISAFNVSADGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLGIITALAFSPDSRALASVSWDSSARVTIIKEK 303
            T +GGSI+TW+T +W R SSK I R+ +ISAFNVSADGK LA GT EG+++I++ST M     +KKAHLG++TAL FSPDSR L SVS+DS AR+T+IK+K
Sbjct:  250 TQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLLAVGTLEGDVLIIDSTKMQTNQIVKKAHLGLVTALTFSPDSRCLVSVSFDSRARLTVIKQK 350          
BLAST of FG533355 vs. TrEMBL
Match: D7MQ96_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_684612 PE=4 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.318e-28
Identity = 63/101 (62.38%), Postives = 81/101 (80.20%), Query Frame = 1
Query:    4 TDKGGSILTWNTQTWERISSKYISRD-AISAFNVSADGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLGIITALAFSPDSRALASVSWDSSARVTIIKEK 303
            T+ GGSI+TW+T +W R SSK I R+ +ISAFNVSADGK LA GT EG+++I++ST M     +KKAHLG++TAL FSPDSR L SVS+DS AR+T+IK+K
Sbjct:   91 TEHGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLLAIGTLEGDLLIIDSTKMQTNQVVKKAHLGLVTALTFSPDSRCLVSVSFDSRARLTVIKQK 191          
BLAST of FG533355 vs. TrEMBL
Match: D7LLR5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484065 PE=4 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.106e-26
Identity = 58/100 (58.00%), Postives = 81/100 (81.00%), Query Frame = 1
Query:    4 TDKGGSILTWNTQTWERISSKYISRDAISAFNVSADGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLGIITALAFSPDSRALASVSWDSSARVTIIKEK 303
            T++GGSI+T++++ W+R  SK I +++ISAFNVSADGK LA GT EG+++I+ ST M     +KKAHLG++TAL FSPDSR L SVS+DS AR+T+I++K
Sbjct:  265 TERGGSIITYDSKLWKRKWSKPIKKNSISAFNVSADGKLLAIGTLEGDVLILESTRMQTMQVVKKAHLGLVTALTFSPDSRCLVSVSFDSRARLTMIEQK 364          
BLAST of FG533355 vs. TrEMBL
Match: C5Y6B7_SORBI (Putative uncharacterized protein Sb05g024260 OS=Sorghum bicolor GN=Sb05g024260 PE=4 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.214e-23
Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:   16 GSILTWNTQTWERISSKYISRDAISAFNVSADGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLGIITALAFSPDSRALASVSWDSSARVTIIKEKKNGG 315
            G I++WNT +W RI SK I+R+AISAF VS +G  L  GT EG III++S +M     +KKAHLGI+T LAFS DSR L S S+DSSARVT +   K+ G
Sbjct:  271 GKIVSWNTTSWTRIGSKKITREAISAFAVSPNGALLGIGTIEGSIIILSSKDMRTLVTVKKAHLGIVTTLAFSQDSRTLLSTSFDSSARVTSVGSPKSNG 370          
BLAST of FG533355 vs. TrEMBL
Match: Q2R1C4_ORYSJ (Os11g0610700 protein OS=Oryza sativa subsp. japonica GN=Os11g0610700 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.197e-23
Identity = 58/102 (56.86%), Postives = 72/102 (70.59%), Query Frame = 1
Query:   16 GSILTWNTQTWERISSKYISRDAISAFNVSADGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLGIITALAFSPDSRALASVSWDSSARVTIIKEKKNGGLN 321
            G I++WNT +W RI S  I+R+AISAF VS D   LA GT EG II+++S NM     +KKAHLGIIT LAFS DSR L S S+DS+ARVT I   K+ G++
Sbjct:  273 GKIISWNTTSWTRIGSNKITREAISAFAVSPDCTLLAIGTIEGSIIVLSSKNMRSLVTVKKAHLGIITTLAFSQDSRTLLSTSFDSTARVTSIGSPKSRGIS 374          
BLAST of FG533355 vs. SwissProt
Match: STLP2_ARATH (SEC12-like protein 2 OS=Arabidopsis thaliana GN=STL2P PE=1 SV=4)

HSP 1 Score: 120.939 bits (302), Expect = 4.931e-27
Identity = 59/100 (59.00%), Postives = 80/100 (80.00%), Query Frame = 1
Query:    4 TDKGGSILTWNTQTWERISSKYISRDAISAFNVSADGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLGIITALAFSPDSRALASVSWDSSARVTIIKEK 303
            T++GGSI+T +T+ W+R  SK I +++ISAFNVSADGK LA GT EG+++I+ ST M     +KKAHLG++TAL FSPDSR L SVS+DS AR+T+I++K
Sbjct:  261 TERGGSIITCDTKLWKRKWSKPIKKNSISAFNVSADGKLLAIGTLEGDVLILESTRMQTIQVVKKAHLGLVTALTFSPDSRGLVSVSFDSRARLTMIEQK 360          
BLAST of FG533355 vs. SwissProt
Match: PHF1_ARATH (SEC12-like protein 1 OS=Arabidopsis thaliana GN=PHF1 PE=2 SV=2)

HSP 1 Score: 54.299 bits (129), Expect = 5.668e-7
Identity = 31/96 (32.29%), Postives = 51/96 (53.12%), Query Frame = 1
Query:   31 WNTQTWERISSKYISRDAISAFNVSADGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLG-IITALAFSPDSRALASVS--W-DSSARVTIIKEKK 306
            ++  TW+++  K +SR   S   VS DGK++A G  +G++ +     M I    K+ HLG  I +L F P  R + + S  W +   ++T+ KE K
Sbjct:  239 YDISTWKKLGFKKLSRKTASTMAVSLDGKYIALGGKDGDVSVAEVKTMEIYHYSKRLHLGQSIASLEFCPSERVMLTTSSEWGEMVTKLTVPKEWK 334          
BLAST of FG533355 vs. TAIR peptide
Match: AT5G50650.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:20610212-20612061 FORWARD LENGTH=383)

HSP 1 Score: 129.028 bits (323), Expect = 1.888e-30
Identity = 63/101 (62.38%), Postives = 81/101 (80.20%), Query Frame = 1
Query:    4 TDKGGSILTWNTQTWERISSKYISRD-AISAFNVSADGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLGIITALAFSPDSRALASVSWDSSARVTIIKEK 303
            T +GGSI+TW+T +W R SSK I R+ +ISAFNVSADGK LA GT EG+++I++ST M     +KKAHLG++TAL FSPDSR L SVS+DS AR+T+IK+K
Sbjct:  250 TQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLLAVGTLEGDVLIIDSTKMQTNQIVKKAHLGLVTALTFSPDSRCLVSVSFDSRARLTVIKQK 350          
BLAST of FG533355 vs. TAIR peptide
Match: AT5G50550.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:20576870-20578719 FORWARD LENGTH=383)

HSP 1 Score: 129.028 bits (323), Expect = 1.888e-30
Identity = 63/101 (62.38%), Postives = 81/101 (80.20%), Query Frame = 1
Query:    4 TDKGGSILTWNTQTWERISSKYISRD-AISAFNVSADGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLGIITALAFSPDSRALASVSWDSSARVTIIKEK 303
            T +GGSI+TW+T +W R SSK I R+ +ISAFNVSADGK LA GT EG+++I++ST M     +KKAHLG++TAL FSPDSR L SVS+DS AR+T+IK+K
Sbjct:  250 TQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLLAVGTLEGDVLIIDSTKMQTNQIVKKAHLGLVTALTFSPDSRCLVSVSFDSRARLTVIKQK 350          
BLAST of FG533355 vs. TAIR peptide
Match: AT2G01470.1 (| Symbols: STL2P, ATSEC12 | SEC12P-like 2 protein | chr2:212215-214435 REVERSE LENGTH=393)

HSP 1 Score: 120.939 bits (302), Expect = 5.142e-28
Identity = 59/100 (59.00%), Postives = 80/100 (80.00%), Query Frame = 1
Query:    4 TDKGGSILTWNTQTWERISSKYISRDAISAFNVSADGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLGIITALAFSPDSRALASVSWDSSARVTIIKEK 303
            T++GGSI+T +T+ W+R  SK I +++ISAFNVSADGK LA GT EG+++I+ ST M     +KKAHLG++TAL FSPDSR L SVS+DS AR+T+I++K
Sbjct:  261 TERGGSIITCDTKLWKRKWSKPIKKNSISAFNVSADGKLLAIGTLEGDVLILESTRMQTIQVVKKAHLGLVTALTFSPDSRGLVSVSFDSRARLTMIEQK 360          
BLAST of FG533355 vs. TAIR peptide
Match: AT3G52190.1 (| Symbols: PHF1 | phosphate transporter traffic facilitator1 | chr3:19354117-19356910 REVERSE LENGTH=398)

HSP 1 Score: 54.299 bits (129), Expect = 5.910e-8
Identity = 31/96 (32.29%), Postives = 51/96 (53.12%), Query Frame = 1
Query:   31 WNTQTWERISSKYISRDAISAFNVSADGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLG-IITALAFSPDSRALASVS--W-DSSARVTIIKEKK 306
            ++  TW+++  K +SR   S   VS DGK++A G  +G++ +     M I    K+ HLG  I +L F P  R + + S  W +   ++T+ KE K
Sbjct:  239 YDISTWKKLGFKKLSRKTASTMAVSLDGKYIALGGKDGDVSVAEVKTMEIYHYSKRLHLGQSIASLEFCPSERVMLTTSSEWGEMVTKLTVPKEWK 334          
The following BLAST results are available for this feature:
BLAST of FG533355 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9SJ58_RICCO1.302e-3261.32Prolactin regulatory element-binding protein, puta... [more]
B9HJB9_POPTR8.438e-3263.00Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9HW60_POPTR7.143e-3163.27Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7T8S7_VITVI3.545e-3060.00Whole genome shotgun sequence of line PN40024, sca... [more]
Q9LUF6_ARATH2.540e-2862.38Protein transport protein SEC12p-like OS=Arabidops... [more]
Q9FGP3_ARATH2.540e-2862.38At5g50550 OS=Arabidopsis thaliana GN=At5g50550 PE=... [more]
D7MQ96_ARALY3.318e-2862.38Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
D7LLR5_ARALY3.106e-2658.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
C5Y6B7_SORBI3.214e-2357.00Putative uncharacterized protein Sb05g024260 OS=So... [more]
Q2R1C4_ORYSJ4.197e-2356.86Os11g0610700 protein OS=Oryza sativa subsp. japoni... [more]
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BLAST of FG533355 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
STLP2_ARATH4.931e-2759.00SEC12-like protein 2 OS=Arabidopsis thaliana GN=ST... [more]
PHF1_ARATH5.668e-732.29SEC12-like protein 1 OS=Arabidopsis thaliana GN=PH... [more]
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BLAST of FG533355 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G50650.11.888e-3062.38| Symbols: | Transducin/WD40 repeat-like superfam... [more]
AT5G50550.11.888e-3062.38| Symbols: | Transducin/WD40 repeat-like superfam... [more]
AT2G01470.15.142e-2859.00| Symbols: STL2P, ATSEC12 | SEC12P-like 2 protein ... [more]
AT3G52190.15.910e-832.29| Symbols: PHF1 | phosphate transporter traffic fa... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320no descriptioncoord: 15..54
score: 7.9coord: 58..97
score:
IPR011046WD40 repeat-like-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 5..95
score: 7.2
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10no descriptioncoord: 5..96
score: 1.4
IPR017986WD40-repeat-containing domainPROFILEPS50294WD_REPEATS_REGIONcoord: 1..106
score: 9
IPR019781WD40 repeat, subgroupPFAMPF00400WD40coord: 63..95
score: 4.6
NoneNo IPR availablePANTHERPTHR23284PROLACTIN REGULATORY ELEMENT BINDING PROTEINcoord: 6..134
score: 2.2
NoneNo IPR availableSEGsegsegcoord: 108..125
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG533355 ID=FG533355; Name=FG533355; organism=Pisum sativum; type=EST; length=605bp
AAAACAGATAAAGGTGGAAGCATCCTGACCTGGAATACGCAAACATGGGA
AAGGATCAGTTCAAAGTATATTTCGCGTGATGCAATATCTGCATTCAATG
TCTCAGCTGATGGAAAGTTTCTGGCATGTGGAACACCAGAAGGTGAGATT
ATAATTGTAAATTCAACTAATATGCATATTCAGACAAAGATAAAAAAGGC
TCACCTTGGCATAATCACTGCTTTAGCATTTTCCCCTGACTCAAGGGCAT
TGGCTTCTGTATCATGGGATTCAAGTGCAAGGGTAACAATAATTAAAGAG
AAGAAAAATGGAGGGTTGAACTTGTGGATTGCTGTATTTATCATCCTACT
CGCAATAGCTGCTGCTTACTTCTTAAAGGTCGAAGGAATTGAAAAGTTAT
GGCTTAAAGATTACTAGTCAAACATAGAAATATTTACTGCTAGCAAAACA
GCTTACCTTTGACATTTCCATTTTTGGGGGTGGTTTTGGATGCTTTTCAT
ATTTTCAACATTCTGAATTGTTTTTACATTGGATGAGTCTCTTTACTGCA
CTGTAAATTGTAAAATTATGATATATACGTGTGTTAAATCATGAGTTTAA
TTGTT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_rpt
IPR011046WD40 repeat-like-containing domain
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR019781WD40 repeat, subgroup