FG533478
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG533478 vs. TrEMBL
Match: C7TQJ9_9ROSA (Putative LHP1 protein (Fragment) OS=Rosa luciae GN=lhp1 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.230e-28 Identity = 80/161 (49.69%), Postives = 100/161 (62.11%), Query Frame = 2 Query: 5 HFQQTV---ISTPNDAQSNGN-GDPLQTDRTRGAKRRKPASVKRFKKEECASE--------TVVDTNNAAANDVSAGGKLEPAWTQN-----------ACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRY 418 HFQ+ ++ P + S + G+P+Q R+ GAKRRK SVKRFK+E SE T V T AA D + L+ A + A I KILKP+GYS S+S+ +QDVSVTFMAMRSDGTEV+VDNK+ K N+P+LLINFYEQHLRY Sbjct: 164 HFQEAKAPEVNGPTNGLSKVDCGEPVQGGRSTGAKRRKSGSVKRFKQEAQVSELGATQNAPTRVSTRYAARVDQTGVENLDYAGENSGRKNKIDECKEAVRITKILKPMGYSTSISNNVQDVSVTFMAMRSDGTEVIVDNKFFKVNHPLLLINFYEQHLRY 324
BLAST of FG533478 vs. TrEMBL
Match: A7M6G2_MALDO (Terminal flower 2 protein OS=Malus domestica GN=MdLHP1b PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.580e-28 Identity = 73/155 (47.10%), Postives = 96/155 (61.94%), Query Frame = 2 Query: 23 ISTPNDAQSNGN-GDPLQTDRTRGAKRRKPASVKRFKKEECASETVVDTNNAAANDVSAGGKLEPAWTQN-------------------ACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYNPS 427 ++ P D S + +P+Q++R+ GAKRRK +SVKRFK+E SE N V GG+ + +N A I KI+KPIGYS S+S+ +QDV VTF AMRSDG+EV+VDNK LK N+P+LLI+FYEQHLRYNP+ Sbjct: 301 VNGPTDGLSKVDCAEPVQSNRSTGAKRRKSSSVKRFKQESQVSELGATPNATTRVSVRYGGRGSQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNPT 455
BLAST of FG533478 vs. TrEMBL
Match: A7M6G1_MALDO (Terminal flower 2 protein OS=Malus domestica GN=MdLHP1b PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.580e-28 Identity = 73/155 (47.10%), Postives = 96/155 (61.94%), Query Frame = 2 Query: 23 ISTPNDAQSNGN-GDPLQTDRTRGAKRRKPASVKRFKKEECASETVVDTNNAAANDVSAGGKLEPAWTQN-------------------ACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYNPS 427 ++ P D S + +P+Q++R+ GAKRRK +SVKRFK+E SE N V GG+ + +N A I KI+KPIGYS S+S+ +QDV VTF AMRSDG+EV+VDNK LK N+P+LLI+FYEQHLRYNP+ Sbjct: 301 VNGPTDGLSKVDCAEPVQSNRSTGAKRRKSSSVKRFKQESQVSELGATPNATTRVSVRYGGRGSQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNPT 455
BLAST of FG533478 vs. TrEMBL
Match: D7UB91_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_24.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019328001 PE=4 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.504e-26 Identity = 76/158 (48.10%), Postives = 96/158 (60.76%), Query Frame = 2 Query: 14 QTVISTPNDAQSNGNG-----DPLQTDRTRGAKRRKPASVKRFKKEECASETVVDTNNAAANDVSAGGKLE-PAWTQN----------ACN---IVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYNPSS 430 Q V + D NG+ + Q+ R GA+RRK SVKRF K+ E N A + + G++E P + N A N I +I+KPI YSAS+S+ QDVSVTFMAMRSDG EVMVDNK+LK NNP+LLINFYEQHLRY+P++ Sbjct: 267 QEVKALEGDCPMNGHSKVERVEMDQSSRRTGARRRKSGSVKRFTKDLAPCEPNDIQNTATRIQIGSCGRVESPEFPGNDSGLNNKFDGAINMSAITEIIKPISYSASISNDAQDVSVTFMAMRSDGKEVMVDNKFLKANNPLLLINFYEQHLRYSPTT 424
BLAST of FG533478 vs. TrEMBL
Match: A7M6G0_MALDO (Terminal flower 2 protein OS=Malus domestica GN=MdLHP1a PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.350e-26 Identity = 68/133 (51.13%), Postives = 83/133 (62.41%), Query Frame = 2 Query: 86 RGAKRRKPASVKRFKKEECASETVVDTNNAAANDVSAGGKLEPAWTQN-------------------ACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYNPS 427 RGAKRRK SVKRFK+E SE TN V G ++ + +N A I KI+KPIGYS S+S+ +QDV VTF AMRSDG+EV+VDNK LK N+P+LLI+FYEQHLRYNP+ Sbjct: 320 RGAKRRKSGSVKRFKQETQVSELGATTNATTRVSVRYGSRVNQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNPT 452
BLAST of FG533478 vs. TrEMBL
Match: A7M6F9_MALDO (Like heterochromatin protein 1 OS=Malus domestica GN=MdLHP1a PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.350e-26 Identity = 68/133 (51.13%), Postives = 83/133 (62.41%), Query Frame = 2 Query: 86 RGAKRRKPASVKRFKKEECASETVVDTNNAAANDVSAGGKLEPAWTQN-------------------ACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYNPS 427 RGAKRRK SVKRFK+E SE TN V G ++ + +N A I KI+KPIGYS S+S+ +QDV VTF AMRSDG+EV+VDNK LK N+P+LLI+FYEQHLRYNP+ Sbjct: 320 RGAKRRKSGSVKRFKQETQVSELGATTNATTRVSVRYGSRVNQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNPT 452
BLAST of FG533478 vs. TrEMBL
Match: A7M6G6_MALDO (Like heterochromatin protein 1 OS=Malus domestica GN=MdLHP1a PE=4 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.836e-25 Identity = 67/131 (51.15%), Postives = 81/131 (61.83%), Query Frame = 2 Query: 86 RGAKRRKPASVKRFKKEECASETVVDTNNAAANDVSAGGKLEPAWTQN-------------------ACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYN 421 RGAKRRK SVKRFK+E SE TN V G ++ + +N A I KI+KPIGYS S+S+ +QDV VTF AMRSDG+EV+VDNK LK N+P+LLI+FYEQHLRYN Sbjct: 320 RGAKRRKSGSVKRFKQETQVSELGATTNATTRVSVRYGSRVNQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYN 450
BLAST of FG533478 vs. TrEMBL
Match: B9I6F0_POPTR (Chromodomain protein OS=Populus trichocarpa GN=CRD902 PE=4 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.096e-24 Identity = 75/165 (45.45%), Postives = 90/165 (54.55%), Query Frame = 2 Query: 5 HFQQTVISTPNDAQSNGNGDP-------LQTDRTRGAKRRKPASVKRFKKEECASETVVDTNNAAANDV-SAGGKLEPA-------WTQ-----------NACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYN 421 HFQ+ S N NG P +Q R GAK+RK SVKRFKK+ E V N++ V S G +P W NA I KILKPIG+SAS+ +QDV +TF A+RSDG EV VDNK+LK NNP LLINFYEQHL+Y+ Sbjct: 276 HFQEEKASEDNGI---ANGLPKVDYVDLVQNSRCTGAKKRKSGSVKRFKKDSVMCEPVFLPNSSGNFSVGSTGAAAQPGIENPSLTWGNSSHMPMTGNSINAFAITKILKPIGFSASVFDNVQDVLITFRALRSDGQEVTVDNKFLKANNPHLLINFYEQHLKYS 437
BLAST of FG533478 vs. TrEMBL
Match: B9SDA2_RICCO (Heterochromatin protein, putative OS=Ricinus communis GN=RCOM_1515380 PE=4 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.528e-23 Identity = 66/147 (44.90%), Postives = 85/147 (57.82%), Query Frame = 2 Query: 62 DPLQTDRTRGAKRRKPASVKRFKKEECASETV---------------------------VDTNNAAANDVSAGGKLEPAWTQNACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYN 421 D +Q R GAKRRK SVKRFKKE E V ++ N A ++ S +P +N+ I KI+KPIG+SAS+ +QDV VTF+AMRSDG EV+VDN +LK NNP+LLI+FYEQHL+Y+ Sbjct: 320 DAVQNSRRTGAKRRKSGSVKRFKKESVMCEPVCLQSSPFFLQPSPLNVSVGLGGTTALGIENGNLAGSNSS----YKPVG-ENSITITKIIKPIGFSASVMDDIQDVLVTFVAMRSDGKEVIVDNSFLKANNPLLLIDFYEQHLKYS 461
BLAST of FG533478 vs. TrEMBL
Match: B9IPZ2_POPTR (Chromo domain protein OS=Populus trichocarpa GN=CRD901 PE=4 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.318e-22 Identity = 64/138 (46.38%), Postives = 83/138 (60.14%), Query Frame = 2 Query: 62 DPLQTDRTRGAKRRKPASVKRFKKEECASETVVDTNNAAANDVSAGGKLEPA-------W-----------TQNACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYN 421 DP+Q + GA++RK SVKRFKK+ + ++A + S GG + W T NA I KILKP G+SAS+S +QDV +TF A+RSDG EV VDN++LK NNP LLINFYEQHL+Y+ Sbjct: 298 DPVQNSQRTGARKRKSGSVKRFKKDS-VKPAFLHNSSANFSVGSTGGVAQLGIENPSLTWGNSSHMPTAENTINALAITKILKPTGFSASVSDNVQDVLITFRALRSDGQEVTVDNRFLKANNPHLLINFYEQHLKYS 434
BLAST of FG533478 vs. SwissProt
Match: LHP1_SOLLC (Chromo domain protein LHP1 OS=Solanum lycopersicum GN=LHP1 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 2.974e-22 Identity = 64/149 (42.95%), Postives = 88/149 (59.06%), Query Frame = 2 Query: 32 PNDAQSNG--NGDP-------LQTDRTRGAKRRKPASVKRFKKEECASETVVDTNNAAAN--------DVSAGGKLEPAWTQNACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYNPS 427 P D NG NG P Q+DR GAK+RK V+RFK+E S DT +A A D S + +++ I +++ P+ Y AS S+ M DVSVTF+A R+DG V+VDNK+LK NNP+LLINFYE+++RY+P+ Sbjct: 251 PVDISGNGLTNGFPKVNGAEFYQSDRCTGAKKRKSGCVRRFKRET-TSAVKDDTQDALAGGPLATFMQDGSHNHVMVADDSKDGYTITQLVNPVSYKASFSNDMLDVSVTFVAKRADGNLVLVDNKFLKMNNPLLLINFYEENMRYHPT 398
BLAST of FG533478 vs. SwissProt
Match: LHP1_ORYSJ (Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica GN=LHP1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.974e-22 Identity = 55/129 (42.64%), Postives = 84/129 (65.12%), Query Frame = 2 Query: 65 PLQTDRTRGAKRRKPASVKRFKKE-------ECASETVVDTNNAAANDVSAGGKLEPAWTQNACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYNPSS 430 P Q + GAK+RK +V+RF++ EC + V + + + + G K + N +I KI+KP+ ++A++++ +Q VS+TF A+RSDG EVMVD+K LK NNP+LLI++YEQ LRYNP+S Sbjct: 289 PSQGGQVTGAKKRKSGNVRRFEQNKPTQGQGECGALVVAE--DVGSTEGETGDKKKTEGCPNRVHITKIIKPVRFAAAVNNDVQQVSITFKALRSDGQEVMVDDKELKANNPLLLISYYEQCLRYNPTS 415
BLAST of FG533478 vs. SwissProt
Match: LHP1_ARATH (Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana GN=LHP1 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.382e-19 Identity = 59/138 (42.75%), Postives = 79/138 (57.25%), Query Frame = 2 Query: 71 QTDRTRGAKRRKPASVKRFKKEECASET-VVDTNNAAAND---------VSAGGKLEPAWTQNACN-----------IVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYN 421 + R GAKRRK SVKRFK++ S T+ D ++ G P +N CN I KILKP+ ++AS+S +Q+V VTF+A+RSDG E +VDN++LK +NP LLI FYEQHL+YN Sbjct: 306 KNSRFIGAKRRKSGSVKRFKQDGSTSNNHTAPTDQNLTPDLTTLDSFGRIARMGNEYPGVMEN-CNLSQKTKIEELDITKILKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNRFLKAHNPHLLIEFYEQHLKYN 442
BLAST of FG533478 vs. TAIR peptide
Match: AT5G17690.1 (| Symbols: TFL2, LHP1 | like heterochromatin protein (LHP1) | chr5:5827504-5829537 REVERSE LENGTH=445) HSP 1 Score: 96.2857 bits (238), Expect = 1.428e-20 Identity = 59/138 (42.75%), Postives = 79/138 (57.25%), Query Frame = 2 Query: 71 QTDRTRGAKRRKPASVKRFKKEECASET-VVDTNNAAAND---------VSAGGKLEPAWTQNACN-----------IVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYN 421 + R GAKRRK SVKRFK++ S T+ D ++ G P +N CN I KILKP+ ++AS+S +Q+V VTF+A+RSDG E +VDN++LK +NP LLI FYEQHL+YN Sbjct: 306 KNSRFIGAKRRKSGSVKRFKQDGSTSNNHTAPTDQNLTPDLTTLDSFGRIARMGNEYPGVMEN-CNLSQKTKIEELDITKILKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNRFLKAHNPHLLIEFYEQHLKYN 442 The following BLAST results are available for this feature:
BLAST of FG533478 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of FG533478 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 3
BLAST of FG533478 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG533478 ID=FG533478; Name=FG533478; organism=Pisum sativum; type=EST; length=626bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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