FG533478

EST Overview
NameFG533478
Unique NameFG533478
TypeEST
OrganismPisum sativum (pea)
Sequence length626
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG533478 vs. TrEMBL
Match: C7TQJ9_9ROSA (Putative LHP1 protein (Fragment) OS=Rosa luciae GN=lhp1 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.230e-28
Identity = 80/161 (49.69%), Postives = 100/161 (62.11%), Query Frame = 2
Query:    5 HFQQTV---ISTPNDAQSNGN-GDPLQTDRTRGAKRRKPASVKRFKKEECASE--------TVVDTNNAAANDVSAGGKLEPAWTQN-----------ACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRY 418
            HFQ+     ++ P +  S  + G+P+Q  R+ GAKRRK  SVKRFK+E   SE        T V T  AA  D +    L+ A   +           A  I KILKP+GYS S+S+ +QDVSVTFMAMRSDGTEV+VDNK+ K N+P+LLINFYEQHLRY
Sbjct:  164 HFQEAKAPEVNGPTNGLSKVDCGEPVQGGRSTGAKRRKSGSVKRFKQEAQVSELGATQNAPTRVSTRYAARVDQTGVENLDYAGENSGRKNKIDECKEAVRITKILKPMGYSTSISNNVQDVSVTFMAMRSDGTEVIVDNKFFKVNHPLLLINFYEQHLRY 324          
BLAST of FG533478 vs. TrEMBL
Match: A7M6G2_MALDO (Terminal flower 2 protein OS=Malus domestica GN=MdLHP1b PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.580e-28
Identity = 73/155 (47.10%), Postives = 96/155 (61.94%), Query Frame = 2
Query:   23 ISTPNDAQSNGN-GDPLQTDRTRGAKRRKPASVKRFKKEECASETVVDTNNAAANDVSAGGKLEPAWTQN-------------------ACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYNPS 427
            ++ P D  S  +  +P+Q++R+ GAKRRK +SVKRFK+E   SE     N      V  GG+   +  +N                   A  I KI+KPIGYS S+S+ +QDV VTF AMRSDG+EV+VDNK LK N+P+LLI+FYEQHLRYNP+
Sbjct:  301 VNGPTDGLSKVDCAEPVQSNRSTGAKRRKSSSVKRFKQESQVSELGATPNATTRVSVRYGGRGSQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNPT 455          
BLAST of FG533478 vs. TrEMBL
Match: A7M6G1_MALDO (Terminal flower 2 protein OS=Malus domestica GN=MdLHP1b PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.580e-28
Identity = 73/155 (47.10%), Postives = 96/155 (61.94%), Query Frame = 2
Query:   23 ISTPNDAQSNGN-GDPLQTDRTRGAKRRKPASVKRFKKEECASETVVDTNNAAANDVSAGGKLEPAWTQN-------------------ACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYNPS 427
            ++ P D  S  +  +P+Q++R+ GAKRRK +SVKRFK+E   SE     N      V  GG+   +  +N                   A  I KI+KPIGYS S+S+ +QDV VTF AMRSDG+EV+VDNK LK N+P+LLI+FYEQHLRYNP+
Sbjct:  301 VNGPTDGLSKVDCAEPVQSNRSTGAKRRKSSSVKRFKQESQVSELGATPNATTRVSVRYGGRGSQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNPT 455          
BLAST of FG533478 vs. TrEMBL
Match: D7UB91_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_24.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019328001 PE=4 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.504e-26
Identity = 76/158 (48.10%), Postives = 96/158 (60.76%), Query Frame = 2
Query:   14 QTVISTPNDAQSNGNG-----DPLQTDRTRGAKRRKPASVKRFKKEECASETVVDTNNAAANDVSAGGKLE-PAWTQN----------ACN---IVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYNPSS 430
            Q V +   D   NG+      +  Q+ R  GA+RRK  SVKRF K+    E     N A    + + G++E P +  N          A N   I +I+KPI YSAS+S+  QDVSVTFMAMRSDG EVMVDNK+LK NNP+LLINFYEQHLRY+P++
Sbjct:  267 QEVKALEGDCPMNGHSKVERVEMDQSSRRTGARRRKSGSVKRFTKDLAPCEPNDIQNTATRIQIGSCGRVESPEFPGNDSGLNNKFDGAINMSAITEIIKPISYSASISNDAQDVSVTFMAMRSDGKEVMVDNKFLKANNPLLLINFYEQHLRYSPTT 424          
BLAST of FG533478 vs. TrEMBL
Match: A7M6G0_MALDO (Terminal flower 2 protein OS=Malus domestica GN=MdLHP1a PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.350e-26
Identity = 68/133 (51.13%), Postives = 83/133 (62.41%), Query Frame = 2
Query:   86 RGAKRRKPASVKRFKKEECASETVVDTNNAAANDVSAGGKLEPAWTQN-------------------ACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYNPS 427
            RGAKRRK  SVKRFK+E   SE    TN      V  G ++  +  +N                   A  I KI+KPIGYS S+S+ +QDV VTF AMRSDG+EV+VDNK LK N+P+LLI+FYEQHLRYNP+
Sbjct:  320 RGAKRRKSGSVKRFKQETQVSELGATTNATTRVSVRYGSRVNQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNPT 452          
BLAST of FG533478 vs. TrEMBL
Match: A7M6F9_MALDO (Like heterochromatin protein 1 OS=Malus domestica GN=MdLHP1a PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.350e-26
Identity = 68/133 (51.13%), Postives = 83/133 (62.41%), Query Frame = 2
Query:   86 RGAKRRKPASVKRFKKEECASETVVDTNNAAANDVSAGGKLEPAWTQN-------------------ACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYNPS 427
            RGAKRRK  SVKRFK+E   SE    TN      V  G ++  +  +N                   A  I KI+KPIGYS S+S+ +QDV VTF AMRSDG+EV+VDNK LK N+P+LLI+FYEQHLRYNP+
Sbjct:  320 RGAKRRKSGSVKRFKQETQVSELGATTNATTRVSVRYGSRVNQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYNPT 452          
BLAST of FG533478 vs. TrEMBL
Match: A7M6G6_MALDO (Like heterochromatin protein 1 OS=Malus domestica GN=MdLHP1a PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.836e-25
Identity = 67/131 (51.15%), Postives = 81/131 (61.83%), Query Frame = 2
Query:   86 RGAKRRKPASVKRFKKEECASETVVDTNNAAANDVSAGGKLEPAWTQN-------------------ACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYN 421
            RGAKRRK  SVKRFK+E   SE    TN      V  G ++  +  +N                   A  I KI+KPIGYS S+S+ +QDV VTF AMRSDG+EV+VDNK LK N+P+LLI+FYEQHLRYN
Sbjct:  320 RGAKRRKSGSVKRFKQETQVSELGATTNATTRVSVRYGSRVNQSGAENLDYAGGNSSRRNKIDESRNAVRITKIIKPIGYSTSVSNDVQDVLVTFKAMRSDGSEVIVDNKSLKVNHPLLLIDFYEQHLRYN 450          
BLAST of FG533478 vs. TrEMBL
Match: B9I6F0_POPTR (Chromodomain protein OS=Populus trichocarpa GN=CRD902 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.096e-24
Identity = 75/165 (45.45%), Postives = 90/165 (54.55%), Query Frame = 2
Query:    5 HFQQTVISTPNDAQSNGNGDP-------LQTDRTRGAKRRKPASVKRFKKEECASETVVDTNNAAANDV-SAGGKLEPA-------WTQ-----------NACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYN 421
            HFQ+   S  N      NG P       +Q  R  GAK+RK  SVKRFKK+    E V   N++    V S G   +P        W             NA  I KILKPIG+SAS+   +QDV +TF A+RSDG EV VDNK+LK NNP LLINFYEQHL+Y+
Sbjct:  276 HFQEEKASEDNGI---ANGLPKVDYVDLVQNSRCTGAKKRKSGSVKRFKKDSVMCEPVFLPNSSGNFSVGSTGAAAQPGIENPSLTWGNSSHMPMTGNSINAFAITKILKPIGFSASVFDNVQDVLITFRALRSDGQEVTVDNKFLKANNPHLLINFYEQHLKYS 437          
BLAST of FG533478 vs. TrEMBL
Match: B9SDA2_RICCO (Heterochromatin protein, putative OS=Ricinus communis GN=RCOM_1515380 PE=4 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.528e-23
Identity = 66/147 (44.90%), Postives = 85/147 (57.82%), Query Frame = 2
Query:   62 DPLQTDRTRGAKRRKPASVKRFKKEECASETV---------------------------VDTNNAAANDVSAGGKLEPAWTQNACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYN 421
            D +Q  R  GAKRRK  SVKRFKKE    E V                           ++  N A ++ S     +P   +N+  I KI+KPIG+SAS+   +QDV VTF+AMRSDG EV+VDN +LK NNP+LLI+FYEQHL+Y+
Sbjct:  320 DAVQNSRRTGAKRRKSGSVKRFKKESVMCEPVCLQSSPFFLQPSPLNVSVGLGGTTALGIENGNLAGSNSS----YKPVG-ENSITITKIIKPIGFSASVMDDIQDVLVTFVAMRSDGKEVIVDNSFLKANNPLLLIDFYEQHLKYS 461          
BLAST of FG533478 vs. TrEMBL
Match: B9IPZ2_POPTR (Chromo domain protein OS=Populus trichocarpa GN=CRD901 PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.318e-22
Identity = 64/138 (46.38%), Postives = 83/138 (60.14%), Query Frame = 2
Query:   62 DPLQTDRTRGAKRRKPASVKRFKKEECASETVVDTNNAAANDVSAGGKLEPA-------W-----------TQNACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYN 421
            DP+Q  +  GA++RK  SVKRFKK+       +  ++A  +  S GG  +         W           T NA  I KILKP G+SAS+S  +QDV +TF A+RSDG EV VDN++LK NNP LLINFYEQHL+Y+
Sbjct:  298 DPVQNSQRTGARKRKSGSVKRFKKDS-VKPAFLHNSSANFSVGSTGGVAQLGIENPSLTWGNSSHMPTAENTINALAITKILKPTGFSASVSDNVQDVLITFRALRSDGQEVTVDNRFLKANNPHLLINFYEQHLKYS 434          
BLAST of FG533478 vs. SwissProt
Match: LHP1_SOLLC (Chromo domain protein LHP1 OS=Solanum lycopersicum GN=LHP1 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 2.974e-22
Identity = 64/149 (42.95%), Postives = 88/149 (59.06%), Query Frame = 2
Query:   32 PNDAQSNG--NGDP-------LQTDRTRGAKRRKPASVKRFKKEECASETVVDTNNAAAN--------DVSAGGKLEPAWTQNACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYNPS 427
            P D   NG  NG P        Q+DR  GAK+RK   V+RFK+E   S    DT +A A         D S    +    +++   I +++ P+ Y AS S+ M DVSVTF+A R+DG  V+VDNK+LK NNP+LLINFYE+++RY+P+
Sbjct:  251 PVDISGNGLTNGFPKVNGAEFYQSDRCTGAKKRKSGCVRRFKRET-TSAVKDDTQDALAGGPLATFMQDGSHNHVMVADDSKDGYTITQLVNPVSYKASFSNDMLDVSVTFVAKRADGNLVLVDNKFLKMNNPLLLINFYEENMRYHPT 398          
BLAST of FG533478 vs. SwissProt
Match: LHP1_ORYSJ (Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica GN=LHP1 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.974e-22
Identity = 55/129 (42.64%), Postives = 84/129 (65.12%), Query Frame = 2
Query:   65 PLQTDRTRGAKRRKPASVKRFKKE-------ECASETVVDTNNAAANDVSAGGKLEPAWTQNACNIVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYNPSS 430
            P Q  +  GAK+RK  +V+RF++        EC +  V +  +  + +   G K +     N  +I KI+KP+ ++A++++ +Q VS+TF A+RSDG EVMVD+K LK NNP+LLI++YEQ LRYNP+S
Sbjct:  289 PSQGGQVTGAKKRKSGNVRRFEQNKPTQGQGECGALVVAE--DVGSTEGETGDKKKTEGCPNRVHITKIIKPVRFAAAVNNDVQQVSITFKALRSDGQEVMVDDKELKANNPLLLISYYEQCLRYNPTS 415          
BLAST of FG533478 vs. SwissProt
Match: LHP1_ARATH (Chromo domain-containing protein LHP1 OS=Arabidopsis thaliana GN=LHP1 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.382e-19
Identity = 59/138 (42.75%), Postives = 79/138 (57.25%), Query Frame = 2
Query:   71 QTDRTRGAKRRKPASVKRFKKEECASET-VVDTNNAAAND---------VSAGGKLEPAWTQNACN-----------IVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYN 421
            +  R  GAKRRK  SVKRFK++   S      T+     D         ++  G   P   +N CN           I KILKP+ ++AS+S  +Q+V VTF+A+RSDG E +VDN++LK +NP LLI FYEQHL+YN
Sbjct:  306 KNSRFIGAKRRKSGSVKRFKQDGSTSNNHTAPTDQNLTPDLTTLDSFGRIARMGNEYPGVMEN-CNLSQKTKIEELDITKILKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNRFLKAHNPHLLIEFYEQHLKYN 442          
BLAST of FG533478 vs. TAIR peptide
Match: AT5G17690.1 (| Symbols: TFL2, LHP1 | like heterochromatin protein (LHP1) | chr5:5827504-5829537 REVERSE LENGTH=445)

HSP 1 Score: 96.2857 bits (238), Expect = 1.428e-20
Identity = 59/138 (42.75%), Postives = 79/138 (57.25%), Query Frame = 2
Query:   71 QTDRTRGAKRRKPASVKRFKKEECASET-VVDTNNAAAND---------VSAGGKLEPAWTQNACN-----------IVKILKPIGYSASLSSYMQDVSVTFMAMRSDGTEVMVDNKYLKTNNPILLINFYEQHLRYN 421
            +  R  GAKRRK  SVKRFK++   S      T+     D         ++  G   P   +N CN           I KILKP+ ++AS+S  +Q+V VTF+A+RSDG E +VDN++LK +NP LLI FYEQHL+YN
Sbjct:  306 KNSRFIGAKRRKSGSVKRFKQDGSTSNNHTAPTDQNLTPDLTTLDSFGRIARMGNEYPGVMEN-CNLSQKTKIEELDITKILKPMSFTASVSDNVQEVLVTFLALRSDGKEALVDNRFLKAHNPHLLIEFYEQHLKYN 442          
The following BLAST results are available for this feature:
BLAST of FG533478 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C7TQJ9_9ROSA1.230e-2849.69Putative LHP1 protein (Fragment) OS=Rosa luciae GN... [more]
A7M6G2_MALDO3.580e-2847.10Terminal flower 2 protein OS=Malus domestica GN=Md... [more]
A7M6G1_MALDO3.580e-2847.10Terminal flower 2 protein OS=Malus domestica GN=Md... [more]
D7UB91_VITVI1.504e-2648.10Whole genome shotgun sequence of line PN40024, sca... [more]
A7M6G0_MALDO3.350e-2651.13Terminal flower 2 protein OS=Malus domestica GN=Md... [more]
A7M6F9_MALDO3.350e-2651.13Like heterochromatin protein 1 OS=Malus domestica ... [more]
A7M6G6_MALDO2.836e-2551.15Like heterochromatin protein 1 OS=Malus domestica ... [more]
B9I6F0_POPTR4.096e-2445.45Chromodomain protein OS=Populus trichocarpa GN=CRD... [more]
B9SDA2_RICCO4.528e-2344.90Heterochromatin protein, putative OS=Ricinus commu... [more]
B9IPZ2_POPTR1.318e-2246.38Chromo domain protein OS=Populus trichocarpa GN=CR... [more]
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BLAST of FG533478 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
LHP1_SOLLC2.974e-2242.95Chromo domain protein LHP1 OS=Solanum lycopersicum... [more]
LHP1_ORYSJ2.974e-2242.64Probable chromo domain-containing protein LHP1 OS=... [more]
LHP1_ARATH1.382e-1942.75Chromo domain-containing protein LHP1 OS=Arabidops... [more]
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BLAST of FG533478 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G17690.11.428e-2042.75| Symbols: TFL2, LHP1 | like heterochromatin prote... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018125Chromo shadow, subgroupSMARTSM00300no descriptioncoord: 69..142
score: 1.1
NoneNo IPR availablePANTHERPTHR22812CHROMOBOX PROTEINcoord: 24..142
score: 2
NoneNo IPR availablePANTHERPTHR22812:SF2CHROMOBOX POLYCOMB - RELATEDcoord: 24..142
score: 2

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG533478 ID=FG533478; Name=FG533478; organism=Pisum sativum; type=EST; length=626bp
AACACATTTTCAACAGACTGTCATTTCAACGCCCAATGATGCTCAATCGA
ACGGGAACGGGGATCCGCTTCAAACTGACCGCACCAGAGGAGCCAAAAGG
AGAAAACCTGCTTCTGTTAAAAGGTTCAAGAAAGAGGAATGTGCGTCTGA
AACTGTTGTTGATACAAACAATGCAGCTGCCAATGACGTCTCTGCTGGTG
GTAAGCTTGAACCAGCCTGGACACAAAATGCATGCAATATTGTCAAGATT
CTAAAGCCAATAGGCTATTCAGCTTCTCTATCTTCCTACATGCAGGATGT
TTCAGTCACCTTTATGGCTATGAGGTCTGATGGAACAGAAGTGATGGTGG
ATAACAAATATCTCAAGACAAACAATCCTATTCTGCTGATCAATTTCTAT
GAGCAGCATCTCCGATACAATCCAAGTTCTTAACTGGATAGAGTATTATT
GAAGGTGGTGGTTTTTTGTGTGATTAAATCTTCTTTTGTTTGTTGCTAGT
TATATATAATGGAGTTGTAGATGCAGGGAAATACGATGTTGGTTAGTATA
TGATTATATAACCAAATCTTTGGAGACTTGCTTTAAACTAGTGATTCTAC
ATTATGTTTTATCCCCTTTACGCATG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR018125Chromo shadow, subgroup