FG533980

EST Overview


Name	FG533980
Unique Name	FG533980
Type	EST
Organism	Pisum sativum (pea)
Sequence length	577

Libraries


Library Name	Type
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of FG533980 vs. TrEMBL
Match: B9T2K9_RICCO (Translation initiation factor, putative OS=Ricinus communis GN=RCOM_0280610 PE=4 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.536e-50
Identity = 105/191 (54.97%), Postives = 134/191 (70.16%), Query Frame = 3

Query:    3 LLFNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            L+F ++  V +F KLT  YCL    GS+ FYS  +++  D+IPV+KTSIA T  +GR C GNKNGLLLPHTTT +E QH++ SLP   VV+RI E L+     IACNDHVA  HTDL +E EE++ DVL VEVF+   + + + G+YCALSN GGL+HP+  T+ E LDELS  L+VP  AGTVN GSE +
Sbjct:    5 LMFENSCEVGVFSKLTNAYCLVAIGGSESFYSAFESELADVIPVVKTSIAGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDNVVVQRIEERLSALGNCIACNDHVALTHTDLDKETEEMIADVLGVEVFRQTIAGNILVGSYCALSNRGGLVHPH--TSIEDLDELSTLLQVPLVAGTVNRGSEVI 193

[Close]

BLAST of FG533980 vs. TrEMBL
Match: A9P7V0_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.029e-49
Identity = 105/191 (54.97%), Postives = 132/191 (69.11%), Query Frame = 3

Query:    3 LLFNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            L F +   V +F KLT  YCL    GS+ FYS  +A+  D+IPV+KTSIA T  +GR C GNKNGLL+PHTTT +E QH++ SLP   VV+RI E L+     IACNDHVA AHTDL +E EE++ DVL VEVF+   + + + G+YCA SN GGL+HP+  T+ E LDELS  L+VP  AGTVN GSE +
Sbjct:    5 LQFENNCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIAGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDEKLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPH--TSIEDLDELSTLLQVPLVAGTVNRGSEVI 193

[Close]

BLAST of FG533980 vs. TrEMBL
Match: Q2PET8_TRIPR (Putative eukaryotic translation initiation factor 6 OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.755e-49
Identity = 106/191 (55.50%), Postives = 132/191 (69.11%), Query Frame = 3

Query:    3 LLFNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            L F ++  V +F KLT  YCL    GS++FYS  +A+  D+IPVI+TSI  T  VGR CIGNKNGLLLPHTTT +E QH+K SLP    V+RI E L+     IACNDHVA  HTDL +E EE++ DVL VEVF+   + + + G+YCA SN GGL+HP+  T+ E LDELS  L+VP  AGTVN GSE +
Sbjct:    5 LKFENSCEVGVFSKLTNAYCLVAIGGSENFYSAFEAELSDVIPVIRTSIGGTRIVGRLCIGNKNGLLLPHTTTDQELQHLKNSLPDQVRVQRIEEKLSALGNCIACNDHVALTHTDLDKETEEVVADVLGVEVFRQTVAGNILVGSYCAFSNKGGLVHPH--TSVEDLDELSTLLQVPLVAGTVNRGSEVI 193

[Close]

BLAST of FG533980 vs. TrEMBL
Match: D7LV66_ARALY (EMB1624 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_906991 PE=4 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.292e-49
Identity = 102/191 (53.40%), Postives = 132/191 (69.11%), Query Frame = 3

Query:    3 LLFNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            L F +   V +F KLT  YCL    GS++FYS  +++  D+IP++KTSI  T  +GR C GNKNGLL+PHTTT +E QH++ SLP   VV+RI E L+     IACNDHVA AHTDL +E EE++ DVL VEVF+   + + + G+YCALSN GG++HP   T+ E LDELS  L+VP  AGTVN GSE +
Sbjct:    5 LQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPIVKTSIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDHVALAHTDLDKETEEIITDVLGVEVFRQTIAGNILVGSYCALSNRGGMVHPR--TSVEDLDELSTLLQVPLVAGTVNRGSEVI 193

[Close]

BLAST of FG533980 vs. TrEMBL
Match: B9HH19_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_719158 PE=4 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.105e-49
Identity = 100/191 (52.36%), Postives = 134/191 (70.16%), Query Frame = 3

Query:    3 LLFNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            L+F ++  V +F KLT  YCL    GS++FYS  +A+  D+IPV+KTSI  +  +GR C GNKNG+LLPHTTT +E QH++ SLP   VV+RI E L+     +ACNDHVA  HTDL +E EE+++DVL VEVF+   + + + G+YCA SN GGL+HP+  T+ E LDELS  L+VP  AGT+N GSE +
Sbjct:    5 LMFENSCEVGVFSKLTNAYCLVAIGGSENFYSTFEAELGDVIPVVKTSIGGSRIIGRLCAGNKNGILLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNGVACNDHVALTHTDLDKETEEMISDVLGVEVFRQTVAGNVLVGSYCAFSNRGGLVHPH--TSIEDLDELSTLLQVPLVAGTINRGSEVI 193

[Close]

BLAST of FG533980 vs. TrEMBL
Match: A9PJA8_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.105e-49
Identity = 100/191 (52.36%), Postives = 134/191 (70.16%), Query Frame = 3

Query:    3 LLFNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            L+F ++  V +F KLT  YCL    GS++FYS  +A+  D+IPV+KTSI  +  +GR C GNKNG+LLPHTTT +E QH++ SLP   VV+RI E L+     +ACNDHVA  HTDL +E EE+++DVL VEVF+   + + + G+YCA SN GGL+HP+  T+ E LDELS  L+VP  AGT+N GSE +
Sbjct:    5 LMFENSCEVGVFSKLTNAYCLVAIGGSENFYSTFEAELGDVIPVVKTSIGGSRIIGRLCAGNKNGILLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNGVACNDHVALTHTDLDKETEEMISDVLGVEVFRQTVAGNVLVGSYCAFSNRGGLVHPH--TSIEDLDELSTLLQVPLVAGTINRGSEVI 193

[Close]

BLAST of FG533980 vs. TrEMBL
Match: Q9M060_ARATH (At3g55620 OS=Arabidopsis thaliana GN=F1I16_30 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.322e-48
Identity = 100/191 (52.36%), Postives = 133/191 (69.63%), Query Frame = 3

Query:    3 LLFNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            L F +   V +F KLT  YCL    GS++FYS  +++  D+IP++KTSI  T  +GR C GNKNGLL+PHTTT +E QH++ SLP   VV+RI E L+     IACND+VA AHTDL +E EE++ DVL VEVF+   + + + G+YCALSN GG++HP+  T+ E L+ELS  L+VP  AGTVN GSE +
Sbjct:    5 LQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPIVKTSIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDYVALAHTDLDKETEEIIADVLGVEVFRQTIAGNILVGSYCALSNKGGMVHPH--TSVEDLEELSTLLQVPLVAGTVNRGSEVI 193

[Close]

BLAST of FG533980 vs. TrEMBL
Match: B9HUM0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_749741 PE=4 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.322e-48
Identity = 103/191 (53.93%), Postives = 130/191 (68.06%), Query Frame = 3

Query:    3 LLFNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            L F +   V +F KLT  YCL    GS+ FYS  +A+  D+IPV+KTSIA T  +GR C GNKNGLL+PHTTT +   H++ SLP   VV+RI E L+     IACNDHVA AHTDL +E EE++ DVL VEVF+   + + + G+YCA SN GGL+HP+  T+ E LDELS  L+VP  AGTVN GSE +
Sbjct:    5 LQFENNCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIAGTRIIGRLCAGNKNGLLVPHTTTDQGLGHLRNSLPDQVVVQRIDEKLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPH--TSIEDLDELSTLLQVPLVAGTVNRGSEVI 193

[Close]

BLAST of FG533980 vs. TrEMBL
Match: C6TLQ4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.645e-48
Identity = 103/191 (53.93%), Postives = 129/191 (67.54%), Query Frame = 3

Query:    3 LLFNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            L F +   V +F KLT TYCL    GS+ FYS  +A+  D+IPV+KTSI  T  +GR C GNKNGLLLPHTTT +E Q ++ SLP   VV+RI E L+     IACNDHVA  HTDL +E EE++ DVL VEVF+   + + + G+YCA SN GGL+HP+  T+ E LDEL   L+VP  AGTVN GSE +
Sbjct:    5 LQFENNCEVGVFSKLTNTYCLVAIGGSESFYSVFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQQLRNSLPDQVVVQRIDERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPH--TSIEDLDELFTLLQVPLVAGTVNRGSEVI 193

[Close]

BLAST of FG533980 vs. TrEMBL
Match: A5BR49_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038707 PE=4 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.645e-48
Identity = 102/191 (53.40%), Postives = 130/191 (68.06%), Query Frame = 3

Query:    3 LLFNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            L F ++  V +F KLT  YCL    GS+ FYS  +++  D+IPV+KTSI  T  +GR C GNK GLLLPHTTT +E QH++ SLP   VV+RI E L+     IACNDHVA AHTDL +E EE++ DVL VEVF+   + + + G+YC  SN GGL+HP+  T+ E LDELS  L+VP  AGTVN GSE +
Sbjct:    5 LQFENSCEVGVFSKLTNAYCLVAIGGSESFYSVFESELADVIPVVKTSIGGTRIIGRLCAGNKKGLLLPHTTTDQELQHLRNSLPDQVVVQRIEEKLSALGNCIACNDHVALAHTDLDRETEEMVADVLGVEVFRQTIAGNILVGSYCTFSNRGGLVHPH--TSIEDLDELSTLLQVPLVAGTVNRGSEVI 193

[Close]

BLAST of FG533980 vs. SwissProt
Match: IF6_BETVU (Eukaryotic translation initiation factor 6 (Fragment) OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.569e-45
Identity = 98/191 (51.31%), Postives = 127/191 (66.49%), Query Frame = 3

Query:    3 LLFNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            L F +   V +F KLT  YCL    GS++FYS  + +  D IPV+KTSIA T  +G     NKNGLL+PHTTT +E QH++  LP + VV+RI E L+     IACND+VA  HTDL +E EEL+ DVL VEVF    + + + G+YCA++N GGL+HP+  T+ E LDELS  L+VP  AGTVN GSE +
Sbjct:    5 LQFENNCEVGVFSKLTNAYCLVAIGGSENFYSTFETELADYIPVVKTSIAGTRIIGPNVCRNKNGLLVPHTTTDQELQHLRNCLPDSVVVQRIEEKLSALGNCIACNDYVALTHTDLDKETEELIADVLGVEVFGQTIAGNILVGSYCAITNKGGLVHPH--TSIEDLDELSTLLQVPLVAGTVNRGSEVI 193

[Close]

BLAST of FG533980 vs. SwissProt
Match: IF6_HUMAN (Eukaryotic translation initiation factor 6 OS=Homo sapiens GN=EIF6 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.341e-43
Identity = 90/189 (47.62%), Postives = 119/189 (62.96%), Query Frame = 3

Query:    9 FNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            F +   +  F KLT TYCL    GS++FYS  + +  D IPV+  SIA    +GR C+GN++GLL+P+ TT +E QHI+ SLP    +RR+ E L+       CND+VA  H DL +E EE+L DVLKVEVF+   +   + G+YC  SN GGL+HP   T+ E  DELS  L+VP  AGTVN GSE +
Sbjct:    7 FENNCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQELQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPK--TSIEDQDELSSLLQVPLVAGTVNRGSEVI 193

[Close]

BLAST of FG533980 vs. SwissProt
Match: IF6_MOUSE (Eukaryotic translation initiation factor 6 OS=Mus musculus GN=Eif6 PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 7.442e-43
Identity = 90/189 (47.62%), Postives = 119/189 (62.96%), Query Frame = 3

Query:    9 FNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            F +   V  F KLT  YCL    GS++FYS  + +  D IPV+  SIA    +GR C+GN++GLL+P+ TT +E QHI+ SLP +  +RR+ E L+       CND+VA  H DL +E EE+L DVLKVEVF+   +   + G+YC  SN GGL+HP   T+ E  DELS  L+VP  AGTVN GSE +
Sbjct:    7 FENNCEVGCFAKLTNAYCLVAIGGSENFYSVFEGELSDAIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPK--TSIEDQDELSSLLQVPLVAGTVNRGSEVI 193

[Close]

BLAST of FG533980 vs. SwissProt
Match: IF6_DROME (Probable eukaryotic translation initiation factor 6 OS=Drosophila melanogaster GN=eIF6 PE=2 SV=3)

HSP 1 Score: 172.17 bits (435), Expect = 1.658e-42
Identity = 89/189 (47.09%), Postives = 123/189 (65.08%), Query Frame = 3

Query:    9 FNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            F + D + +F KLT TYCL    GS+ FYS  +A+  D IPV+  ++     +GR  +GN+NGLL+P++TT EE QH++ SLP A  + R+ E L+     IACND+VA  H DL +E EE++ DVLKVEVF+   + + + G+Y  LSN GG++HP   T+ +  DELS  L+VP  AGTVN GSE L
Sbjct:    7 FENNDDIGVFTKLTNTYCLVAIGGSETFYSAFEAELGDTIPVVHANVGGCRIIGRLTVGNRNGLLVPNSTTDEELQHLRNSLPDAVKIYRVEERLSALGNVIACNDYVALVHPDLDKETEEIIADVLKVEVFRQTIADNSLVGSYAVLSNQGGMVHPK--TSIQDQDELSSLLQVPLVAGTVNRGSEVL 193

[Close]

BLAST of FG533980 vs. SwissProt
Match: IF6_YEAST (Eukaryotic translation initiation factor 6 OS=Saccharomyces cerevisiae GN=TIF6 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 8.228e-42
Identity = 86/189 (45.50%), Postives = 125/189 (66.14%), Query Frame = 3

Query:    9 FNDTDHVEMFCKLTCTYCLFGEG-SDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            F +++ + +F KLT TYCL   G S++FYS  +A+  D IP++ T+IA T  +GR   GN+ GLL+P  TT +E QH++ SLP +  ++R+ E L+     I CND+VA  H D+ +E EEL++DVL VEVF+   S + + G+YC+LSN GGL+HP   T+ +  +ELS  L+VP  AGTVN GS  +
Sbjct:    7 FENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGDAIPIVHTTIAGTRIIGRMTAGNRRGLLVPTQTTDQELQHLRNSLPDSVKIQRVEERLSALGNVICCNDYVALVHPDIDRETEELISDVLGVEVFRQTISGNILVGSYCSLSNQGGLVHPQ--TSVQDQEELSSLLQVPLVAGTVNRGSSVV 193

[Close]

BLAST of FG533980 vs. SwissProt
Match: IF6_BOVIN (Eukaryotic translation initiation factor 6 OS=Bos taurus GN=EIF6 PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 2.394e-41
Identity = 87/189 (46.03%), Postives = 118/189 (62.43%), Query Frame = 3

Query:    9 FNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            F +   +  F KLT +YCL    GS++FYS  + +    IPV+  SIA    +GR C+GN++GLL+P+ TT +E QHI+  LP +  +RR+ E L+       CND+VA  H DL +E EE+L DVLKVEVF+   +   + G+YC  SN GGL+HP   T+ E  DELS  L+VP  AGTVN GSE +
Sbjct:    7 FENNCEIGCFAKLTNSYCLVAIGGSENFYSVFEGELAGTIPVVHASIAGCRIIGRMCVGNRHGLLVPNNTTDQELQHIRNCLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPK--TSIEDQDELSSLLQVPLVAGTVNRGSEVI 193

[Close]

BLAST of FG533980 vs. SwissProt
Match: IF6_SCHPO (Eukaryotic translation initiation factor 6 OS=Schizosaccharomyces pombe GN=tif6 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.515e-40
Identity = 79/189 (41.80%), Postives = 123/189 (65.08%), Query Frame = 3

Query:    9 FNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            F +++ + +F  LT +Y L    GS++FYS  +A+  D++PV+ T+I  T  +GR   GN+ GLL+P +TT  E QH++ SLP    ++R+ E L+     +ACND+VA  H D+ +E EE++ DVL VEVF+   + + ++G+YCALSN G L+HP  +  ++  DELS  L+VP  AGT+N GS+ +
Sbjct:    7 FENSNEIGVFSNLTNSYALVALGGSENFYSVFEAELGDVVPVVHTTIGGTRIIGRLTCGNRKGLLVPSSTTDNELQHLRNSLPDPVKIQRVDERLSALGNIVACNDYVALVHPDIERETEEIIADVLDVEVFRQTVAGNVLTGSYCALSNQGALVHPRTSIQEQ--DELSSLLQVPLVAGTINRGSDVI 193

[Close]

BLAST of FG533980 vs. SwissProt
Match: IF6_DICDI (Probable eukaryotic translation initiation factor 6 OS=Dictyostelium discoideum GN=eif6 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.006e-39
Identity = 91/189 (48.15%), Postives = 119/189 (62.96%), Query Frame = 3

Query:    3 LLFNDTDHVEMFCKLTCTYCLFGE-GSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSE 566
            L + ++  V +F KLT  YCL G+ GS  F    + +  D IPV++TSIA T  VGR   GNKNGLLLP+T T +E Q I+ SLP   VV+RI E  +     IA ND+VA  H D+ +E EE++ DVL VEVF+   S + + GTYCAL+N G L+HP  +   +  DELS  L+VP  AGTVN G+E
Sbjct:    5 LQYENSCDVGVFLKLTNKYCLVGQCGSKQFLHTVENRLADHIPVVETSIAGTRIVGRLSAGNKNGLLLPNTCTDQELQQIRNSLPDDVVVQRIEEKFSALGNCIATNDYVALVHPDIDRETEEIIADVLGVEVFRQTVSGNVLVGTYCALTNQGALVHPMTSIADQ--DELSSLLQVPLVAGTVNRGNE 191

[Close]

BLAST of FG533980 vs. SwissProt
Match: IF6_CAEEL (Eukaryotic translation initiation factor 6 OS=Caenorhabditis elegans GN=eif-6 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 8.515e-39
Identity = 83/189 (43.92%), Postives = 121/189 (64.02%), Query Frame = 3

Query:    9 FNDTDHVEMFCKLTCTYCLFGEG-SDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            +  ++ V +FC LT +YCL G G + +FYS  +A+  D+IPV+ TSIA T  VGR  +GN++GLL+P+ TT +E QH++ SLP    +RR+ E L+     IACNDHVA  H ++  E E+ L +VLKVEVF+   + + + G+YC LS+ G L+   A T  E   E++  L++P  AGT N GSE +
Sbjct:    7 YEGSNDVGVFCTLTNSYCLVGVGGTQNFYSILEAELSDLIPVVHTSIASTRIVGRLTVGNRHGLLVPNATTDQELQHLRNSLPDEVAIRRVDERLSALGNVIACNDHVAIVHAEISAETEQALVEVLKVEVFRVSLAQNSLVGSYCILSSNGCLV--AARTPPETQREIAALLQIPVVAGTCNRGSELI 193

[Close]

BLAST of FG533980 vs. SwissProt
Match: IF6_ARATH (Eukaryotic translation initiation factor 6 OS=Arabidopsis thaliana GN=At2g39820 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.112e-38
Identity = 80/189 (42.33%), Postives = 121/189 (64.02%), Query Frame = 3

Query:   12 NDTDHVEMFCKLTCTYCLFG--EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            N+   + +F KLT  YCL      S +F++  ++K + +IP++ TSI  +  +G  C+GNKNGLLL HT T +E QH++ SLP   VV+RI E +      IACND+VA  H  L ++ EE+++DVL VEV++   + + + G+YC+LSN GG++H N  T  E + EL+  ++VP  AGTVN GS+ +
Sbjct:    9 NNNCEIGVFSKLTNAYCLVSATSASANFFTGYESKLKGVIPIVTTSIGGSGTIGSLCVGNKNGLLLSHTITDQELQHLRDSLPDEVVVQRIEEPICALGNAIACNDYVALVHPKLEKDTEEIISDVLGVEVYRQTIANNELVGSYCSLSNNGGMVHSN--TNVEEMVELANLVQVPLVAGTVNRGSQVI 195

[Close]

BLAST of FG533980 vs. TAIR peptide
Match: AT3G55620.1 (| Symbols: emb1624 | Translation initiation factor IF6 | chr3:20634581-20636312 FORWARD LENGTH=245)

HSP 1 Score: 194.512 bits (493), Expect = 3.314e-50
Identity = 100/191 (52.36%), Postives = 133/191 (69.63%), Query Frame = 3

Query:    3 LLFNDTDHVEMFCKLTCTYCLFG-EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            L F +   V +F KLT  YCL    GS++FYS  +++  D+IP++KTSI  T  +GR C GNKNGLL+PHTTT +E QH++ SLP   VV+RI E L+     IACND+VA AHTDL +E EE++ DVL VEVF+   + + + G+YCALSN GG++HP+  T+ E L+ELS  L+VP  AGTVN GSE +
Sbjct:    5 LQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPIVKTSIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDYVALAHTDLDKETEEIIADVLGVEVFRQTIAGNILVGSYCALSNKGGMVHPH--TSVEDLEELSTLLQVPLVAGTVNRGSEVI 193

[Close]

BLAST of FG533980 vs. TAIR peptide
Match: AT2G39820.1 (| Symbols: | Translation initiation factor IF6 | chr2:16618459-16619592 FORWARD LENGTH=247)

HSP 1 Score: 159.458 bits (402), Expect = 1.181e-39
Identity = 80/189 (42.33%), Postives = 121/189 (64.02%), Query Frame = 3

Query:   12 NDTDHVEMFCKLTCTYCLFG--EGSDDFYSEGDAKFEDIIPVIKTSIADTSWVGRYCIGNKNGLLLPHTTTPEEYQHIKRSLPHATVVRRIPEGLTCYARFIACNDHVAFAHTDLHQEVEELLNDVLKVEVFKPKKSCSFISGTYCALSNIGGLIHPNATTTKEVLDELSENLEVPFEAGTVNDGSETL 572
            N+   + +F KLT  YCL      S +F++  ++K + +IP++ TSI  +  +G  C+GNKNGLLL HT T +E QH++ SLP   VV+RI E +      IACND+VA  H  L ++ EE+++DVL VEV++   + + + G+YC+LSN GG++H N  T  E + EL+  ++VP  AGTVN GS+ +
Sbjct:    9 NNNCEIGVFSKLTNAYCLVSATSASANFFTGYESKLKGVIPIVTTSIGGSGTIGSLCVGNKNGLLLSHTITDQELQHLRDSLPDEVVVQRIEEPICALGNAIACNDYVALVHPKLEKDTEEIISDVLGVEVYRQTIANNELVGSYCSLSNNGGMVHSN--TNVEEMVELANLVQVPLVAGTVNRGSQVI 195

The following BLAST results are available for this feature:

BLAST of FG533980 vs. TrEMBL
BLAST of FG533980 vs. SwissProt
BLAST of FG533980 vs. TAIR peptide

BLAST of FG533980 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9T2K9_RICCO	3.536e-50	54.97	Translation initiation factor, putative OS=Ricinus...	[more]
A9P7V0_POPTR	1.029e-49	54.97	Putative uncharacterized protein OS=Populus tricho...	[more]
Q2PET8_TRIPR	1.755e-49	55.50	Putative eukaryotic translation initiation factor ...	[more]
D7LV66_ARALY	2.292e-49	53.40	EMB1624 OS=Arabidopsis lyrata subsp. lyrata GN=ARA...	[more]
B9HH19_POPTR	5.105e-49	52.36	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PJA8_9ROSI	5.105e-49	52.36	Putative uncharacterized protein OS=Populus tricho...	[more]
Q9M060_ARATH	4.322e-48	52.36	At3g55620 OS=Arabidopsis thaliana GN=F1I16_30 PE=2...	[more]
B9HUM0_POPTR	4.322e-48	53.93	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
C6TLQ4_SOYBN	5.645e-48	53.93	Putative uncharacterized protein OS=Glycine max PE...	[more]
A5BR49_VITVI	5.645e-48	53.40	Putative uncharacterized protein OS=Vitis vinifera...	[more]

BLAST of FG533980 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
IF6_BETVU	3.569e-45	51.31	Eukaryotic translation initiation factor 6 (Fragme...	[more]
IF6_HUMAN	3.341e-43	47.62	Eukaryotic translation initiation factor 6 OS=Homo...	[more]
IF6_MOUSE	7.442e-43	47.62	Eukaryotic translation initiation factor 6 OS=Mus ...	[more]
IF6_DROME	1.658e-42	47.09	Probable eukaryotic translation initiation factor ...	[more]
IF6_YEAST	8.228e-42	45.50	Eukaryotic translation initiation factor 6 OS=Sacc...	[more]
IF6_BOVIN	2.394e-41	46.03	Eukaryotic translation initiation factor 6 OS=Bos ...	[more]
IF6_SCHPO	4.515e-40	41.80	Eukaryotic translation initiation factor 6 OS=Schi...	[more]
IF6_DICDI	1.006e-39	48.15	Probable eukaryotic translation initiation factor ...	[more]
IF6_CAEEL	8.515e-39	43.92	Eukaryotic translation initiation factor 6 OS=Caen...	[more]
IF6_ARATH	1.112e-38	42.33	Eukaryotic translation initiation factor 6 OS=Arab...	[more]

BLAST of FG533980 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G55620.1	3.314e-50	52.36	\| Symbols: emb1624 \| Translation initiation factor...	[more]
AT2G39820.1	1.181e-39	42.33	\| Symbols: \| Translation initiation factor IF6 \| ...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 38..60 score
None	No IPR available	GENE3D	3.75.10.10	no description	coord: 3..189 score: 1.4
None	No IPR available	SUPERFAMILY	55909	Pentein	coord: 3..190 score: 3.3
None	No IPR available	SEG	seg	seg	coord: 18..28 score: NAcoord: 61..78 score
None	No IPR available	SEG	seg	seg	coord: 11..22 score
IPR002769	Translation initiation factor IF6	PANTHER	PTHR10784	TRANSLATION INITIATION FACTOR 6	coord: 1..190 score: 7.4
IPR002769	Translation initiation factor IF6	PFAM	PF01912	eIF-6	coord: 3..189 score: 1
IPR002769	Translation initiation factor IF6	SMART	SM00654	no description	coord: 1..189 score: 1.4
IPR002769	Translation initiation factor IF6	TIGRFAMs	TIGR00323	eIF-6: putative translation initiation facto	coord: 1..191 score: 1.3

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG533980 ID=FG533980; Name=FG533980; organism=Pisum sativum; type=EST; length=577bp
GGCTTCTGTTTAACGACACTGATCATGTTGAAATGTTCTGTAAACTTACC
TGTACCTACTGTTTGTTCGGGGAAGGTTCCGATGACTTCTACAGTGAAGG
TGATGCCAAATTTGAAGATATTATCCCTGTCATTAAAACCTCCATTGCTG
ACACTAGTTGGGTTGGTCGTTATTGTATTGGAAACAAGAACGGGCTTCTC
TTGCCCCATACAACCACACCTGAAGAATATCAGCATATAAAAAGAAGTCT
ACCTCATGCAACTGTTGTGCGGCGCATCCCAGAAGGATTGACTTGTTATG
CAAGATTTATAGCATGTAATGACCATGTTGCCTTTGCGCACACTGATCTC
CACCAGGAAGTCGAGGAGTTGCTCAACGATGTCCTTAAGGTAGAGGTTTT
CAAGCCGAAGAAATCTTGTAGTTTTATTTCTGGAACATACTGTGCCCTGT
CCAACATAGGTGGTTTGATCCACCCCAACGCTACCACGACCAAAGAAGTA
TTGGATGAACTTTCTGAAAATCTTGAAGTTCCTTTTGAAGCTGGGACCGT
CAATGATGGCAGCGAAACTTTATTTCC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Biological Process**
Term	Definition
GO:0042256	cytosolic ribosome assembly

Vocabulary: **Molecular Function**
Term	Definition
GO:0043022	ribosome binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002769	eIF6

Search form