AM161856

EST Overview
NameAM161856
Unique NameAM161856
TypeEST
OrganismPisum sativum (pea)
Sequence length540
Libraries
Library NameType
LIBEST_019360 Pisum sativum leaf vegetativecdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of AM161856 vs. TrEMBL
Match: B7FMJ3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 7.943e-56
Identity = 112/163 (68.71%), Postives = 124/163 (76.07%), Query Frame = 2
Query:   71 MSSFVSLHILHGSLLRSKFLGQENLTHFYPHSNRASIFHSKPTYRTLRICAEFDLLQIMGGRGLCKGEEGLQKELKREVRFDDQN-------XXXXXXXXXXXXXXXXXXVAEEGFEKELLGLTGGFPGGEKGLMKFIEENPVPKPDADRKDLTLSSSEKAKP 538
            MSSFV+LH LHGSLLRSKFLGQENLTH YPHSN+ASIFHSKPT++T++ CA+FDLLQIMGGRGLCKGEEGLQKELKREV  DD+N                         VAE+GF+KEL+GLTGGFPGGEKGL KFIEENP+PK     K L LSSSEK KP
Sbjct:    1 MSSFVALHSLHGSLLRSKFLGQENLTHLYPHSNKASIFHSKPTFKTVQTCAKFDLLQIMGGRGLCKGEEGLQKELKREVGLDDRNQPTSSEASDKEQEDSTSNSTKSFESVAEDGFDKELMGLTGGFPGGEKGLKKFIEENPLPKTVKGNKSLKLSSSEKPKP 163          
BLAST of AM161856 vs. TrEMBL
Match: C6T3F6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 7.469e-38
Identity = 89/164 (54.27%), Postives = 109/164 (66.46%), Query Frame = 2
Query:   71 MSSFVSLHILHGSLLRSKFLGQENLTHFYPHSNRASIFHSKPTYRTLRICAEFDLLQIMGGRGLCKGEEGLQKELKREVRFDDQ-------NXXXXXXXXXXXXXXXXXXVAEEGFEKELLGLTGGFPGGEKGLMKFIEENPVP-KPDADRKDLTLSSSEKAKP 538
            MSSFV LH LHGSLLRS+FLGQ+ LTH YP  N+AS  H+KPT  T +  A+FD+LQ++GGRGLC GE GL++ELKRE+  D++       +                   AE+GFEKEL+GLTGGFPGGEKGL KFI+ENP P KP    K L L+  +K KP
Sbjct:    2 MSSFVVLHGLHGSLLRSQFLGQDTLTHLYPR-NKASTIHNKPT--TAQPRAKFDMLQVLGGRGLCNGEAGLKQELKRELGVDEKAPASATSDKEQELEEESSTTQSLASVAAEDGFEKELMGLTGGFPGGEKGLKKFIQENPPPLKPSQGSKSLKLALPKKPKP 162          
BLAST of AM161856 vs. TrEMBL
Match: Q2HVK0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC148817g13v2 PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.908e-25
Identity = 65/139 (46.76%), Postives = 90/139 (64.75%), Query Frame = 2
Query:   71 MSSFVSLHILHGSLLRSKFLGQENLTHFYPHSNRASIFHSKPTYRTLRICAEFDLLQIMGGRGLCKGEEGLQKELKREVRFDD----QNXXXXXXXXXXXXXXXXXXVAEEGFEKELLGLTGGFPGGEKGLMKFIEENP 475
            M +F +L  LHGSLLRS+FLGQ+   H +     ++  H KP  + L+  AEF++L++MGGRGLC GE+GL++ELKR+V  ++                        + E+GFEKE++GLTGGFPGGEKGL+KFIE+NP
Sbjct:    1 MVAFATLQGLHGSLLRSQFLGQD---HHFTLMKSSTTHHRKPASQ-LQPRAEFNILKMMGGRGLCNGEKGLEQELKRQVDKEETTSSNEKVQENSDGSEKLTSDIVAIPEDGFEKEMMGLTGGFPGGEKGLIKFIEKNP 135          
BLAST of AM161856 vs. TrEMBL
Match: B9GL56_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_709173 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.110e-24
Identity = 67/147 (45.58%), Postives = 87/147 (59.18%), Query Frame = 2
Query:   98 LHGSLLRSKFLGQENLTHFYPHSNRASIFHSKPTYRTLRICAEFDLLQIMGGRGLCKGEEGLQKELKREVRFDDQNXXXXXXXXXXXXXXXXXXVAEEGFEKELLGLTGGFPGGEKGLMKFIEENPVPKPDADRKDLTLSSSEKAKP 538
            L  +LLRS FLGQ N  + +PH   + I   K     ++ CA+FD  +I+GGRGLC GE+G+Q+EL+R +   ++                   V E+GFEKEL+GLTGGFPGGEKGL KFIEENP PK     K   L+ + K KP
Sbjct:    7 LQSTLLRSSFLGQNNFPN-HPHKPYSLI--PKEHRLKIKTCAKFDPFEILGGRGLCNGEKGVQQELQRNI---EEEAPPAAGEEEYSGNLEISSVPEDGFEKELMGLTGGFPGGEKGLEKFIEENPPPKKQPAAK---LTITNKPKP 144          
BLAST of AM161856 vs. TrEMBL
Match: B9GXI8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_554492 PE=4 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 8.017e-24
Identity = 66/144 (45.83%), Postives = 87/144 (60.42%), Query Frame = 2
Query:   98 LHGSLLRSKFLGQENLTHFYPHSNRASIFHSKPTYRTLRICAEFDLLQIMGGRGLCKGEEGLQKELKREVRFDDQNXXXXXXXXXXXXXXXXXXVAEEGFEKELLGLTGGFPGGEKGLMKFIEENPVPKPDADRKDLTLSSSEK 529
            L  +LLRS FLGQ N  + +PH   + I   K     L+ CA+ DL +I+GGRGLC GE+G+Q+ELKR +   ++                   V ++ FEKEL+GLTGGFPGGEKGL +FIEENP PK  +  K LT++S  K
Sbjct:    7 LQSTLLRSNFLGQNNCFN-HPHKPYSLI--PKDHRLKLKTCAKLDLFEILGGRGLCNGEKGVQQELKRNI---EEQASSTAGREENSGSLEKSSVPDDAFEKELMGLTGGFPGGEKGLKRFIEENPSPKKQSVPK-LTITSRPK 143          
BLAST of AM161856 vs. TrEMBL
Match: B9RCT3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1692090 PE=4 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.047e-23
Identity = 68/151 (45.03%), Postives = 88/151 (58.28%), Query Frame = 2
Query:   98 LHGSLLRSKFLGQENLTHFYPHSNRASIFHSKPTYRTLRICAEFDLLQIMGGRGLCKGEEGLQKELKREVRFDDQNXXXXXXXXXXXXXXXXXX--VAEEGFEKELLGLTGGFPGGEKGLMKFIEENPVPKPDA---DRKDLTLSSSEKAK 535
            L G+LLRS FLGQ N     P+   +SI   K +   L+ CA+FDL + +GGRGLC GE+G+Q+ELKR+      +                    V E  FEKEL+GLTGGFPGGEKGL KFIEENP PK  +     + L +++S+K K
Sbjct:    7 LQGTLLRSHFLGQNNSLLNRPNRPYSSI--PKESRFKLKPCAKFDLFEFLGGRGLCNGEQGIQQELKRDAAEASSSSVAAQEENSGAAAQASENENVPENAFEKELMGLTGGFPGGEKGLKKFIEENPPPKKQSAIDSVRILEIATSKKPK 155          
BLAST of AM161856 vs. TrEMBL
Match: C6T3I2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.745e-22
Identity = 64/146 (43.84%), Postives = 87/146 (59.59%), Query Frame = 2
Query:   71 MSSFVSLHILHGSLLRSKFLGQEN-LTHFYPHSNRASIFHSKPTYRTLRI-CAEFDLLQIMGGRGLCKGEEGLQKELKREVRFDDQN-----------XXXXXXXXXXXXXXXXXXVAEEGFEKELLGLTGGFPGGEKGLMKFIEE 469
            M++F +LH LH  L RS+FLGQ++ LTH +P   +     + PT+  L    A+F++L++MGGRGLC GE+GLQ+ELKR+V     +                             V E+GFEKE++GLTGGFPGGEKGL KFIE+
Sbjct:    1 MATFPTLHGLHNPLPRSQFLGQDHPLTHQFPLKQQVH-HKTAPTHEVLMPRAAKFNILEMMGGRGLCNGEKGLQQELKRQVVVPQSSISSQEEEAPSGEKEEQEGEGGDDDEGSVEVPEDGFEKEMMGLTGGFPGGEKGLKKFIEK 145          
BLAST of AM161856 vs. TrEMBL
Match: Q9T0A4_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=AT4g23890 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.117e-20
Identity = 57/142 (40.14%), Postives = 83/142 (58.45%), Query Frame = 2
Query:   74 SSFVSLHILHGSLLRSKFLGQENLTHFYPHSNRASIFHSKPTYRTLRICA--EFDLLQIMGGRGLCKGEEGLQKELKREVRFDDQNXXXXXXXXXXXXXXXXXX--VAEEGFEKELLGLTGGFPGGEKGLMKFIEENPVPKP 487
            +S +++  +   + RSKFLGQ   TH +   NR+     K   +  ++ A  +F+L ++MGGRGLC GE+G++KEL+R +  + +                     V E+GFEKE++GLTGGFPGGEKGL  FIE+NP P P
Sbjct:    3 TSSITIPTIRTPIHRSKFLGQ---THQFSTVNRSVFPPPKQQSKLYQVKAMGKFNLWEVMGGRGLCNGEKGIEKELQRNIEDEQETSKAENNETERESDDSNLSFKVPEDGFEKEMMGLTGGFPGGEKGLKTFIEKNPPPPP 141          
BLAST of AM161856 vs. TrEMBL
Match: D7TVG0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019536001 PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.117e-20
Identity = 58/123 (47.15%), Postives = 76/123 (61.79%), Query Frame = 2
Query:  116 RSKFLGQENLTHFYPHSNRASIFHSKPTYRTLRICAEFDLLQIMGGRGLCKGEEGLQKELKREVRFDDQNXXXXXXXXXXXXXXXXXXVAEEGFEKELLGLTGGFPGGEKGLMKFIEENPVPK 484
            +S FLGQ    HF  +  +AS+  ++ T   ++  A+FDL  IMGGRGLC GEEGLQ+ELKR +  +                     V E+GF+KELLGLTGGFPGGEKGL +F+E+NP P+
Sbjct:   17 KSHFLGQG---HFPNNIQKASLSRTR-TPLPVKASAKFDLFGIMGGRGLCNGEEGLQQELKRNI--EPAPSPDSVKDEEKPALAAVDDVPEDGFDKELLGLTGGFPGGEKGLKQFLEKNPPPE 133          
BLAST of AM161856 vs. TrEMBL
Match: A5AG98_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003162 PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.117e-20
Identity = 58/123 (47.15%), Postives = 76/123 (61.79%), Query Frame = 2
Query:  116 RSKFLGQENLTHFYPHSNRASIFHSKPTYRTLRICAEFDLLQIMGGRGLCKGEEGLQKELKREVRFDDQNXXXXXXXXXXXXXXXXXXVAEEGFEKELLGLTGGFPGGEKGLMKFIEENPVPK 484
            +S FLGQ    HF  +  +AS+  ++ T   ++  A+FDL  IMGGRGLC GEEGLQ+ELKR +  +                     V E+GF+KELLGLTGGFPGGEKGL +F+E+NP P+
Sbjct:   17 KSHFLGQG---HFPNNIQKASLSRTR-TPLPVKASAKFDLFGIMGGRGLCNGEEGLQQELKRNI--EPAPSPDSVKDEEKPALAAVDDVPEDGFDKELLGLTGGFPGGEKGLKQFLEKNPPPE 133          
BLAST of AM161856 vs. TAIR peptide
Match: AT4G23890.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3252 (InterPro:IPR021659); Has 287 Blast hits to 287 proteins in 81 species: Archae - 0; Bacteria - 118; Metazoa - 12; Fungi - 6; Plants - 40; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink). | chr4:12420593-12421345 REVERSE LENGTH=250)

HSP 1 Score: 101.293 bits (251), Expect = 3.391e-22
Identity = 57/142 (40.14%), Postives = 83/142 (58.45%), Query Frame = 2
Query:   74 SSFVSLHILHGSLLRSKFLGQENLTHFYPHSNRASIFHSKPTYRTLRICA--EFDLLQIMGGRGLCKGEEGLQKELKREVRFDDQNXXXXXXXXXXXXXXXXXX--VAEEGFEKELLGLTGGFPGGEKGLMKFIEENPVPKP 487
            +S +++  +   + RSKFLGQ   TH +   NR+     K   +  ++ A  +F+L ++MGGRGLC GE+G++KEL+R +  + +                     V E+GFEKE++GLTGGFPGGEKGL  FIE+NP P P
Sbjct:    3 TSSITIPTIRTPIHRSKFLGQ---THQFSTVNRSVFPPPKQQSKLYQVKAMGKFNLWEVMGGRGLCNGEKGIEKELQRNIEDEQETSKAENNETERESDDSNLSFKVPEDGFEKEMMGLTGGFPGGEKGLKTFIEKNPPPPP 141          
The following BLAST results are available for this feature:
BLAST of AM161856 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FMJ3_MEDTR7.943e-5668.71Putative uncharacterized protein OS=Medicago trunc... [more]
C6T3F6_SOYBN7.469e-3854.27Putative uncharacterized protein OS=Glycine max PE... [more]
Q2HVK0_MEDTR1.908e-2546.76Putative uncharacterized protein OS=Medicago trunc... [more]
B9GL56_POPTR2.110e-2445.58Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GXI8_POPTR8.017e-2445.83Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RCT3_RICCO1.047e-2345.03Putative uncharacterized protein OS=Ricinus commun... [more]
C6T3I2_SOYBN5.745e-2243.84Putative uncharacterized protein OS=Glycine max PE... [more]
Q9T0A4_ARATH4.117e-2040.14Putative uncharacterized protein OS=Arabidopsis th... [more]
D7TVG0_VITVI4.117e-2047.15Whole genome shotgun sequence of line PN40024, sca... [more]
A5AG98_VITVI4.117e-2047.15Putative uncharacterized protein OS=Vitis vinifera... [more]
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BLAST of AM161856 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G23890.13.391e-2240.14| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 48..64
score
NoneNo IPR availableSEGsegsegcoord: 88..105
score
NoneNo IPR availableSEGsegsegcoord: 28..52
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>AM161856 ID=AM161856; Name=AM161856; organism=Pisum sativum; type=EST; length=540bp
ATTCTTTTCCTTCTACTTTCTGCTCTCACTAATGCTGTCTTTAGCCAATT
TTCTCAACAGTTAACTAACAATGTCTTCTTTTGTTTCCCTTCATATCCTT
CATGGCTCTCTTCTAAGATCCAAATTCTTAGGCCAAGAAAATCTCACTCA
TTTTTATCCTCACAGCAACAGAGCTTCCATCTTTCACAGCAAACCAACCT
ACAGAACGTTACGGATATGTGCCGAATTCGACCTGCTGCAAATCATGGGA
GGCAGAGGACTCTGTAAAGGAGAAGAAGGACTTCAAAAGGAGCTCAAAAG
AGAAGTTCGTTTTGATGATCAGAATCAACCACCATCATCAGAAGCAGCTA
GTAACAACTCATCACAGTCCTTTGAAAGTGTTGCAGAAGAAGGTTTTGAG
AAAGAGTTGCTGGGGTTAACCGGAGGGTTTCCAGGAGGTGAAAAAGGGTT
GATGAAATTCATTGAAGAAAACCCTGTTCCAAAACCTGATGCAGATAGAA
AAGACTTAACACTTTCATCGTCAGAAAAGGCGAAACCACC
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