EX568894

EST Overview
NameEX568894
Unique NameEX568894
TypeEST
OrganismPisum sativum (pea)
Sequence length379
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of EX568894 vs. TrEMBL
Match: B7FGZ8_MEDTR (Proteasome subunit beta type OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.374e-25
Identity = 56/59 (94.92%), Postives = 58/59 (98.31%), Query Frame = 3
Query:    3 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHDSLLDIIGAPEPMTI 179
            SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAH+SLLDI+GAPEPM I
Sbjct:  174 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHNSLLDILGAPEPMNI 232          
BLAST of EX568894 vs. TrEMBL
Match: C6SVE5_SOYBN (Proteasome subunit beta type OS=Glycine max PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.418e-23
Identity = 51/59 (86.44%), Postives = 58/59 (98.31%), Query Frame = 3
Query:    3 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHDSLLDIIGAPEPMTI 179
            SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLP+WH+E+EAH+SLLDI+G PEPM++
Sbjct:  175 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPLWHEEMEAHNSLLDILGVPEPMSM 233          
BLAST of EX568894 vs. TrEMBL
Match: B9SPS6_RICCO (Proteasome subunit beta type OS=Ricinus communis GN=RCOM_0205360 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.281e-20
Identity = 49/61 (80.33%), Postives = 54/61 (88.52%), Query Frame = 3
Query:    3 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHDSLLDIIGA--PEPMTI 179
            SLA+ARDGASGGVVRTVIINSEGVTRNFYPGD LP+WH+ELE  +SLLDI+ A  PEPM I
Sbjct:  171 SLAMARDGASGGVVRTVIINSEGVTRNFYPGDSLPLWHEELEPQNSLLDILNASSPEPMNI 231          
BLAST of EX568894 vs. TrEMBL
Match: Q2V3D4_ARATH (Proteasome subunit beta type OS=Arabidopsis thaliana GN=At4g31300 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.719e-19
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 3
Query:    3 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHDSLLDIIGA--PEPMTI 179
            SLAIARDGASGGVVRTVIINSEGVTRNFYPGD+L +WH+ELE  +SLLDI+ A  PEPM +
Sbjct:  174 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPMAM 234          
BLAST of EX568894 vs. TrEMBL
Match: D7MB80_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_328593 PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.719e-19
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 3
Query:    3 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHDSLLDIIGA--PEPMTI 179
            SLAIARDGASGGVVRTVIINSEGVTRNFYPGD+L +WH+ELE  +SLLDI+ A  PEPM +
Sbjct:  174 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPMAM 234          
BLAST of EX568894 vs. TrEMBL
Match: D7T0M7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_65.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032253001 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.342e-18
Identity = 46/59 (77.97%), Postives = 52/59 (88.14%), Query Frame = 3
Query:    3 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHDSLLDII--GAPEPM 173
            SLAIARDGASGGVVRTV INSEGVT+NFYPGD LP+WH+ELE  +SLLDI+   +PEPM
Sbjct:  172 SLAIARDGASGGVVRTVTINSEGVTKNFYPGDTLPLWHEELEPQNSLLDILSSSSPEPM 230          
BLAST of EX568894 vs. TrEMBL
Match: C5Z3R9_SORBI (Proteasome subunit beta type OS=Sorghum bicolor GN=Sb10g002700 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.342e-18
Identity = 45/59 (76.27%), Postives = 52/59 (88.14%), Query Frame = 3
Query:    3 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHDSLLDII--GAPEPM 173
            SLA+ARDGASGGVVRTV IN++GV RNFYPGD+LP+WHDELE H SLLDI+  G P+PM
Sbjct:  185 SLAMARDGASGGVVRTVTINADGVKRNFYPGDKLPLWHDELEPHHSLLDILAAGNPDPM 243          
BLAST of EX568894 vs. TrEMBL
Match: C5YH49_SORBI (Proteasome subunit beta type OS=Sorghum bicolor GN=Sb07g025030 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.342e-18
Identity = 45/59 (76.27%), Postives = 52/59 (88.14%), Query Frame = 3
Query:    3 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHDSLLDII--GAPEPM 173
            SLA+ARDGASGGVVRTV IN++GV RNFYPGD+LP+WHDELE H SLLDI+  G P+PM
Sbjct:  185 SLAMARDGASGGVVRTVTINADGVKRNFYPGDKLPLWHDELEPHHSLLDILAAGNPDPM 243          
BLAST of EX568894 vs. TrEMBL
Match: D7SU52_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035567001 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.059e-18
Identity = 44/61 (72.13%), Postives = 53/61 (86.89%), Query Frame = 3
Query:    3 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHDSLLDII--GAPEPMTI 179
            SLAIARDGASGGV+RTVIINSEGVTRNFYPGD LP+WH+EL   +SLL+++   +PEPM +
Sbjct:  163 SLAIARDGASGGVIRTVIINSEGVTRNFYPGDSLPLWHEELPPQNSLLELLHSSSPEPMNV 223          
BLAST of EX568894 vs. TrEMBL
Match: B6TGL3_MAIZE (Proteasome subunit beta type OS=Zea mays PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.162e-17
Identity = 44/59 (74.58%), Postives = 52/59 (88.14%), Query Frame = 3
Query:    3 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHDSLLDII--GAPEPM 173
            SLA+ARDGASGGVVRTV IN++GV RNFYPGD+LP+WHDELE  +SLLDI+  G P+PM
Sbjct:  183 SLAMARDGASGGVVRTVTINADGVKRNFYPGDKLPLWHDELEPQNSLLDILAAGNPDPM 241          
BLAST of EX568894 vs. SwissProt
Match: PSB6_ARATH (Proteasome subunit beta type-6 OS=Arabidopsis thaliana GN=PBA1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.309e-20
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 3
Query:    3 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHDSLLDIIGA--PEPMTI 179
            SLAIARDGASGGVVRTVIINSEGVTRNFYPGD+L +WH+ELE  +SLLDI+ A  PEPM +
Sbjct:  173 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPMAM 233          
BLAST of EX568894 vs. SwissProt
Match: PSB6_TOBAC (Proteasome subunit beta type-6 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.712e-15
Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = 3
Query:    3 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHDSLLDIIGAPEPM 173
            SLAIARDGASGGVVRTV IN +G TR FY GD L +WH+ELE  +SLLD++ A  P+
Sbjct:  174 SLAIARDGASGGVVRTVTINKDGATRKFYSGDSLQLWHEELEPVNSLLDVVFASSPV 230          
BLAST of EX568894 vs. TAIR peptide
Match: AT4G31300.3 (| Symbols: PBA1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein | chr4:15188927-15190935 FORWARD LENGTH=233)

HSP 1 Score: 97.4413 bits (241), Expect = 2.172e-21
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 3
Query:    3 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHDSLLDIIGA--PEPMTI 179
            SLAIARDGASGGVVRTVIINSEGVTRNFYPGD+L +WH+ELE  +SLLDI+ A  PEPM +
Sbjct:  173 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPMAM 233          
BLAST of EX568894 vs. TAIR peptide
Match: AT4G31300.2 (| Symbols: PBA1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein | chr4:15188927-15190935 FORWARD LENGTH=234)

HSP 1 Score: 97.4413 bits (241), Expect = 2.172e-21
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 3
Query:    3 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHDSLLDIIGA--PEPMTI 179
            SLAIARDGASGGVVRTVIINSEGVTRNFYPGD+L +WH+ELE  +SLLDI+ A  PEPM +
Sbjct:  174 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPMAM 234          
BLAST of EX568894 vs. TAIR peptide
Match: AT4G31300.1 (| Symbols: PBA1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein | chr4:15188927-15190935 FORWARD LENGTH=233)

HSP 1 Score: 97.4413 bits (241), Expect = 2.172e-21
Identity = 48/61 (78.69%), Postives = 54/61 (88.52%), Query Frame = 3
Query:    3 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPIWHDELEAHDSLLDIIGA--PEPMTI 179
            SLAIARDGASGGVVRTVIINSEGVTRNFYPGD+L +WH+ELE  +SLLDI+ A  PEPM +
Sbjct:  173 SLAIARDGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPMAM 233          
The following BLAST results are available for this feature:
BLAST of EX568894 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FGZ8_MEDTR3.374e-2594.92Proteasome subunit beta type OS=Medicago truncatul... [more]
C6SVE5_SOYBN1.418e-2386.44Proteasome subunit beta type OS=Glycine max PE=2 S... [more]
B9SPS6_RICCO7.281e-2080.33Proteasome subunit beta type OS=Ricinus communis G... [more]
Q2V3D4_ARATH4.719e-1978.69Proteasome subunit beta type OS=Arabidopsis thalia... [more]
D7MB80_ARALY4.719e-1978.69Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7T0M7_VITVI2.342e-1877.97Whole genome shotgun sequence of line PN40024, sca... [more]
C5Z3R9_SORBI2.342e-1876.27Proteasome subunit beta type OS=Sorghum bicolor GN... [more]
C5YH49_SORBI2.342e-1876.27Proteasome subunit beta type OS=Sorghum bicolor GN... [more]
D7SU52_VITVI3.059e-1872.13Whole genome shotgun sequence of line PN40024, sca... [more]
B6TGL3_MAIZE1.162e-1774.58Proteasome subunit beta type OS=Zea mays PE=2 SV=1[more]
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BLAST of EX568894 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
PSB6_ARATH2.309e-2078.69Proteasome subunit beta type-6 OS=Arabidopsis thal... [more]
PSB6_TOBAC1.712e-1566.67Proteasome subunit beta type-6 OS=Nicotiana tabacu... [more]
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BLAST of EX568894 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT4G31300.32.172e-2178.69| Symbols: PBA1 | N-terminal nucleophile aminohydr... [more]
AT4G31300.22.172e-2178.69| Symbols: PBA1 | N-terminal nucleophile aminohydr... [more]
AT4G31300.12.172e-2178.69| Symbols: PBA1 | N-terminal nucleophile aminohydr... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 1..46
score: 1.9
NoneNo IPR availablePANTHERPTHR11599:SF4PROTEASOME SUBUNIT BETA TYPE 6,9coord: 1..46
score: 1.9

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX568894 ID=EX568894; Name=EX568894; organism=Pisum sativum; type=EST; length=379bp
TTTCGCTTGCCATTGCTCGTGACGGTGCTAGTGGTGGAGTTGTCAGAACT
GTCATTATTAACTCAGAGGGAGTGACTAGGAATTTCTACCCAGGTGATCA
ACTTCCAATATGGCACGACGAACTTGAGGCTCATGACTCCCTGCTAGACA
TTATTGGTGCCCCAGAGCCAATGACCATATGAAGAAGTCTCAGTTATAAA
GAAACTTGCATGGCTAGATTGTCATCCTCTTGACCGAACTATTTTATGGA
ATTTGTGTAATCAACTAATTATATTGTTCGGTTAGATGTTGGTTACTATA
TATCTTCGTGTGTACTATGGATAACTTTATTTTCAACCCATTGGATAAGA
AACATCCTGCCGTTACTTTTTCTTTTTGG
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