EX569167

EST Overview


Name	EX569167
Unique Name	EX569167
Type	EST
Organism	Pisum sativum (pea)
Sequence length	883

Libraries


Library Name	Type
LIBEST_021973 Pisum sativum shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

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BLAST of EX569167 vs. TrEMBL
Match: C6TK80_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 430.639 bits (1106), Expect = 8.800e-119
Identity = 215/239 (89.96%), Postives = 220/239 (92.05%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG 718
            EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVL+FIGKKEGLQLP  FAARI EKSNRNLRRAILSFETCRVQQYPFT+KQTI PMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPP               DAELKHEVCHWAAYYE+RMRLGQKAIFHIEAFVAKFMS+YKSFLI+TFG
Sbjct:  116 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLEFIGKKEGLQLPPGFAARIVEKSNRNLRRAILSFETCRVQQYPFTNKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYELLRKLDAELKHEVCHWAAYYEYRMRLGQKAIFHIEAFVAKFMSIYKSFLISTFG 354

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BLAST of EX569167 vs. TrEMBL
Match: D7U8I2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_32.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022436001 PE=4 SV=1)

HSP 1 Score: 411.764 bits (1057), Expect = 4.230e-113
Identity = 201/239 (84.10%), Postives = 216/239 (90.38%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG 718
            EMAKNRPIDTKGKKGF+VLVLN+VD+LSREAQHSLRRTMEKYSA CRLILCCNSSS+VTEA+RSRCLN+RINAP+EEQI +VL+FI KKEGLQLPS FA RIAEKSNR+LRRAILSFETCRVQQYPFT+ Q + PMDWEEY+SEIASDIMKEQSPKRLFQVRGKLYELLINCIPP               DAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMS+YK+FLIATFG
Sbjct:  116 EMAKNRPIDTKGKKGFRVLVLNEVDRLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNIRINAPTEEQITKVLEFIAKKEGLQLPSGFATRIAEKSNRSLRRAILSFETCRVQQYPFTNNQAMPPMDWEEYVSEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLLELLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG 354

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BLAST of EX569167 vs. TrEMBL
Match: B9IPU6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_826161 PE=4 SV=1)

HSP 1 Score: 404.445 bits (1038), Expect = 6.754e-111
Identity = 200/239 (83.68%), Postives = 214/239 (89.54%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG 718
            EMAKNRPIDTKGKKG+KVLVLN+VDKLSREAQHSLRRTMEKYSA CRLILCCNSSS+VTEAIRSRCLNVRINAP EEQIV+VL+FIGKKEGLQLP  FAARIA+KSNR+LRRAILSFETCRVQQYPF+  Q I PMDWEEY+SEI SDIM+EQSPKRLFQVRGKLYELLINCIPP               D ELKHEVCHWAAYYEHRMR+GQKAIFH+EAFVAKFMS+YK+FLIATFG
Sbjct:  116 EMAKNRPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAIRSRCLNVRINAPKEEQIVKVLEFIGKKEGLQLPPGFAARIADKSNRSLRRAILSFETCRVQQYPFSSNQAIPPMDWEEYVSEICSDIMREQSPKRLFQVRGKLYELLINCIPP-EIILKLLSELLKKLDEELKHEVCHWAAYYEHRMRMGQKAIFHLEAFVAKFMSIYKAFLIATFG 353

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BLAST of EX569167 vs. TrEMBL
Match: Q8VXX4_ARATH (Putative replication factor C OS=Arabidopsis thaliana GN=At5g27740 PE=2 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 6.989e-108
Identity = 191/239 (79.92%), Postives = 213/239 (89.12%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG 718
            EMAKNRPIDTKGKKG+KVLVLN+VDKLSREAQHSLRRTMEKYS+ CRLILCCNSSS+VTEAI+SRCLNVRINAPS+E+IV+VL+F+ KKE LQLP  FAARIAEKSNR+LRRAILS ETCRVQ YPFT  Q ISPMDWEEY++EIA+D+MKEQSPK+LFQVRGK+YELL+NCIPP               D+ELK EVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMS+YK+FLI+TFG
Sbjct:  116 EMAKNRPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSRCLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQNYPFTGNQVISPMDWEEYVAEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRLLHELLKKLDSELKLEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKNFLISTFG 354

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BLAST of EX569167 vs. TrEMBL
Match: D7M5I2_ARALY (Nucleoside-triphosphatase/ nucleotide binding protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_351718 PE=4 SV=1)

HSP 1 Score: 388.267 bits (996), Expect = 5.009e-106
Identity = 191/244 (78.28%), Postives = 213/244 (87.30%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPP-----XXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG 718
            EMAKNRPIDTKGKKG+KVLVLN+VDKLSREAQHSLRRTMEKYS+ CRLILCCNSSS+VTEAI+SRCLNVRINAPS+E+IV+VL+F+ KKE LQLP  FAARIAEKSNR+LRRAILS ETCRVQ YPFT  Q ISPMDWEEY++EIA+D+MKEQSPK+LFQVRGK+YELL+NCIPP                    D+ELK EVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMS+YK+FLI+TFG
Sbjct:  116 EMAKNRPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSRCLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQNYPFTGNQVISPMDWEEYVAEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKFMLSQRLLHELLKKLDSELKLEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKNFLISTFG 359

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BLAST of EX569167 vs. TrEMBL
Match: Q852K3_ORYSJ (Activator 1 38 kDa subunit, putative, expressed OS=Oryza sativa subsp. japonica GN=OSJNBb0060J21.20 PE=2 SV=1)

HSP 1 Score: 382.104 bits (980), Expect = 3.589e-104
Identity = 182/239 (76.15%), Postives = 206/239 (86.19%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG 718
            EMAKNRPID KGK+ FKVLVLN+VDKLSREAQHSLRRTMEKYSA CRLILCCNSSS+VTEA+RSRCLNVR+NAPSE+QIV+VL+FIGKKE LQLP  FAARIA +SNRNLRRAIL FETC+VQQYPFT  Q   P+DWE+Y+SEIA+DIMKEQSPKRLF VR K YELL+NCIPP               D++LKHE+CHWAA+YEH+MRLG KAIFH+EAFVAKFMS+YK FL++TFG
Sbjct:  116 EMAKNRPIDAKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRVNAPSEDQIVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQYPFTSNQVAPPLDWEQYVSEIAADIMKEQSPKRLFAVRQKFYELLVNCIPPESILKKLLAELLKKLDSDLKHEICHWAAHYEHKMRLGSKAIFHLEAFVAKFMSIYKEFLVSTFG 354

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BLAST of EX569167 vs. TrEMBL
Match: Q84N07_ORYSJ (Replication factor C 38 kDa subunit OS=Oryza sativa subsp. japonica GN=OsRFC5 PE=2 SV=1)

HSP 1 Score: 382.104 bits (980), Expect = 3.589e-104
Identity = 182/239 (76.15%), Postives = 206/239 (86.19%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG 718
            EMAKNRPID KGK+ FKVLVLN+VDKLSREAQHSLRRTMEKYSA CRLILCCNSSS+VTEA+RSRCLNVR+NAPSE+QIV+VL+FIGKKE LQLP  FAARIA +SNRNLRRAIL FETC+VQQYPFT  Q   P+DWE+Y+SEIA+DIMKEQSPKRLF VR K YELL+NCIPP               D++LKHE+CHWAA+YEH+MRLG KAIFH+EAFVAKFMS+YK FL++TFG
Sbjct:  116 EMAKNRPIDVKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRVNAPSEDQIVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQYPFTSNQVAPPLDWEQYVSEIAADIMKEQSPKRLFAVRQKFYELLVNCIPPESILKKLLAELLKKLDSDLKHEICHWAAHYEHKMRLGSKAIFHLEAFVAKFMSIYKEFLVSTFG 354

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BLAST of EX569167 vs. TrEMBL
Match: A2XMT5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13856 PE=4 SV=1)

HSP 1 Score: 382.104 bits (980), Expect = 3.589e-104
Identity = 182/239 (76.15%), Postives = 206/239 (86.19%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG 718
            EMAKNRPID KGK+ FKVLVLN+VDKLSREAQHSLRRTMEKYSA CRLILCCNSSS+VTEA+RSRCLNVR+NAPSE+QIV+VL+FIGKKE LQLP  FAARIA +SNRNLRRAIL FETC+VQQYPFT  Q   P+DWE+Y+SEIA+DIMKEQSPKRLF VR K YELL+NCIPP               D++LKHE+CHWAA+YEH+MRLG KAIFH+EAFVAKFMS+YK FL++TFG
Sbjct:  116 EMAKNRPIDAKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRVNAPSEDQIVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQYPFTSNQVAPPLDWEQYVSEIAADIMKEQSPKRLFAVRQKFYELLVNCIPPESILKKLLAELLKKLDSDLKHEICHWAAHYEHKMRLGSKAIFHLEAFVAKFMSIYKEFLVSTFG 354

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BLAST of EX569167 vs. TrEMBL
Match: B6T5I0_MAIZE (Replication factor C subunit 5 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 2.327e-103
Identity = 181/239 (75.73%), Postives = 205/239 (85.77%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG 718
            EMAKNRPID KGK+ FKVLVLN+VDKLSREAQHSLRRTMEKYS+ CRLILCCNSSS+VTEA+RSRCLNVR+NAPSE+QIV+VL+FIGKKE L LP+ FAARIA +SNRNLRRAIL FETC+VQQYPFT  Q   P+DWE+Y+SEIA+DI+ EQSPKRLF VR K YELL+NCIPP               DA+LKHE+CHWAA+YEH+MRLG KAIFH+EAFVAKFMSVYK FL+ATFG
Sbjct:  116 EMAKNRPIDAKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAVRSRCLNVRVNAPSEDQIVQVLEFIGKKENLHLPAGFAARIAAQSNRNLRRAILFFETCKVQQYPFTSNQVAPPLDWEQYVSEIATDILTEQSPKRLFAVRQKFYELLVNCIPPESILKKLLGELLRKLDADLKHEICHWAAHYEHKMRLGSKAIFHLEAFVAKFMSVYKEFLVATFG 354

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BLAST of EX569167 vs. TrEMBL
Match: B4FER3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 2.327e-103
Identity = 181/239 (75.73%), Postives = 205/239 (85.77%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG 718
            EMAKNRPID KGK+ FKVLVLN+VDKLSREAQHSLRRTMEKYS+ CRLILCCNSSS+VTEA+RSRCLNVR+NAPSE+QIV+VL+FIGKKE L LP+ FAARIA +SNRNLRRAIL FETC+VQQYPFT  Q   P+DWE+Y+SEIA+DI+ EQSPKRLF VR K YELL+NCIPP               DA+LKHE+CHWAA+YEH+MRLG KAIFH+EAFVAKFMSVYK FL+ATFG
Sbjct:  116 EMAKNRPIDAKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAVRSRCLNVRVNAPSEDQIVQVLEFIGKKENLHLPAGFAARIAAQSNRNLRRAILFFETCKVQQYPFTSNQVAPPLDWEQYVSEIATDILTEQSPKRLFAVRQKFYELLVNCIPPESILKKLLAELLRKLDADLKHEICHWAAHYEHKMRLGSKAIFHLEAFVAKFMSVYKEFLVATFG 354

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BLAST of EX569167 vs. SwissProt
Match: RFC3_MOUSE (Replication factor C subunit 3 OS=Mus musculus GN=Rfc3 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 2.172e-71
Identity = 130/233 (55.79%), Postives = 173/233 (74.25%), Query Frame = 2

Query:    5 MAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFL 703
            +A+++ ++T  ++ FKV++L +VDKL+++AQH+LRRTMEKY + CRLILCCNS+S+V   IRSRCL VR+ APS E I  VL  + +KEGL LPS+ A R+AEKS RNLR+A+L  E CRVQQYPFT+ Q I   DWE Y+ E A+ I+ +Q+P+RL +VRG+LYELL +CIPP               D +LK EV   AAYYEHR++LG KAI+H+EAFVAKFM++YK F+
Sbjct:  115 VAQSQQLETSSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIEDICSVLSTVCRKEGLALPSTLARRLAEKSCRNLRKALLMCEACRVQQYPFTEDQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELLHNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMALYKKFM 347

[Close]

BLAST of EX569167 vs. SwissProt
Match: RFC3_HUMAN (Replication factor C subunit 3 OS=Homo sapiens GN=RFC3 PE=1 SV=2)

HSP 1 Score: 268.47 bits (685), Expect = 3.704e-71
Identity = 131/233 (56.22%), Postives = 171/233 (73.39%), Query Frame = 2

Query:    5 MAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFL 703
            +A+++ ++T  ++ FKV++L +VDKL+++AQH+LRRTMEKY + CRLILCCNS+S+V   IRSRCL VR+ APS E I  VL  + KKEGL LPS  A R+AEKS RNLR+A+L  E CRVQQYPFT  Q I   DWE Y+ E A+ I+ +Q+P+RL +VRG+LYELL +CIPP               D +LK EV   AAYYEHR++LG KAI+H+EAFVAKFM++YK F+
Sbjct:  115 VAQSQQLETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELLHNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMALYKKFM 347

[Close]

BLAST of EX569167 vs. SwissProt
Match: RFC3_BOVIN (Replication factor C subunit 3 OS=Bos taurus GN=RFC3 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 6.318e-71
Identity = 131/233 (56.22%), Postives = 170/233 (72.96%), Query Frame = 2

Query:    5 MAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFL 703
            +A+++ ++T  +K FKV++L +VDKL+++AQH+LRRTMEKY + CRLILCCNS+S+V   IRSRCL VR+ APS E I  VL  + KKEGL LP   A R+AEKS RNLR+A+L  E CRVQQYPFT  Q I   DWE Y+ E A+ I+ +Q+P+RL +VRG+LYELL +CIPP               D +LK EV   AAYYEHR++LG KAI+H+EAFVAKFM++YK F+
Sbjct:  115 VAQSQQLETSSQKDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIEDICHVLSTVCKKEGLNLPPQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELLHNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMALYKKFM 347

[Close]

BLAST of EX569167 vs. SwissProt
Match: RFC3_DICDI (Probable replication factor C subunit 3 OS=Dictyostelium discoideum GN=rfc3 PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 6.766e-65
Identity = 117/233 (50.21%), Postives = 164/233 (70.39%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSF 700
            E+A++ PID+     FK+++LN+VDKLS++AQH+LRRTMEKY+ +CRLILCC+S+++V + I+SRCL +R+ APS+E+I +VL  +   E   LPS  A  +A++S  NLR A++  E+ + +QYPF   + +  +DWE YIS+I  D  +EQSP RL  VRGKLYELL +CIPP               D  +K E+ HWA+YYEHR ++G K IFH+EAF+AKFMSVYK +
Sbjct:  114 EIAQSPPIDSGSLGAFKIVILNEVDKLSKDAQHALRRTMEKYATFCRLILCCDSTAKVIDPIKSRCLGIRVPAPSQEEIEKVLAKVATAEKFDLPSKLAVNVAKQSGGNLRYALMLLESQKAKQYPFQSTE-LPLLDWENYISQIVKDCFEEQSPARLSIVRGKLYELLGHCIPPELIFKTLLLEIFKKLDHNMKFEIIHWASYYEHRSQIGSKPIFHLEAFIAKFMSVYKKY 345

[Close]

BLAST of EX569167 vs. SwissProt
Match: RFC5_NEUCR (Replication factor C subunit 5 OS=Neurospora crassa GN=B14D6.460 PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.857e-57
Identity = 111/236 (47.03%), Postives = 153/236 (64.83%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIA 709
            E+A+ + +D   K+ FKV+V+N+ D L+R+AQ +LRRTMEKYS   RLIL  NS++ +   IRSRCL VR+ AP+ ++I +VL    KKEG  +      RIAE+S RNLRRA+L +E    Q    TD   I P DWE  I +IA +IM+E +P R+ QVR KLY+LL +CIP                D  LK +V +W+A+YEHR+R G K IFH+EAFVAKFM +++ +L++
Sbjct:  114 EVAQTQQVDLSAKQRFKVVVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRCLLVRVAAPTHKEICDVLASSAKKEGWPIVKGLHQRIAEESGRNLRRALLMYEAVYAQNEKVTDSTPIPPPDWEALIGQIAKEIMEEHTPARILQVRAKLYDLLTHCIPATIILKTLTFKLIPLIDDALKADVIYWSAFYEHRIRTGTKVIFHLEAFVAKFMRIFEMYLMS 349

[Close]

BLAST of EX569167 vs. SwissProt
Match: RFC5_SCHPO (Replication factor C subunit 5 OS=Schizosaccharomyces pombe GN=rfc5 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.158e-46
Identity = 104/235 (44.26%), Postives = 144/235 (61.28%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRV-----QQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVY 691
            ++A++  +D + KK FKV+V+N  D+L+R+AQ +LRRTMEKYS   RLIL  NS+S++ E IRSR L VR+ AP+ E+I+ V+  I   +GL+ P S    IA   +RNLR+AIL  ET        +Q   T  Q   P DW+ +I ++   +++EQSP R+  VR  LY+LL +CIPP               D +L   +   AA YEHR R+G K+IFH+EAFVA FM VY
Sbjct:  113 DVAQSAQVDLQAKKIFKVVVINVADELTRDAQAALRRTMEKYSNNIRLILIANSTSKIIEPIRSRTLMVRVAAPTPEEIILVMSKILTAQGLEAPDSLLNNIANNCDRNLRKAILLLETVHAKSPGNKQLIDTGAQLPLP-DWQTFIQQVGDSMLQEQSPARILAVRSMLYDLLSHCIPPTTILKELLSFFLSKVDTKLHPYLIQAAANYEHRTRMGNKSIFHLEAFVAYFMKVY 346

[Close]

BLAST of EX569167 vs. SwissProt
Match: RFC5_YEAST (Replication factor C subunit 5 OS=Saccharomyces cerevisiae GN=RFC5 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.067e-30
Identity = 79/236 (33.47%), Postives = 127/236 (53.81%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKG-----FKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPS-SFAARIAEKSNRNLRRAILSFETCRV-QQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPP--XXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFM 682
            E+A+   +D +  K      +K +++N+ + L+++AQ +LRRTMEKYS   RLI+ C+S S +   I+SRCL +R  APS+ +I  +L  +   E +QL +     RIA+ SN NLR ++L  E+  +  +        I   DW   I ++   I+KE+S   L + R  LY+LL +CIP                  +   K  +  +++ ++ R+ LG KAIFH+E F+AK M
Sbjct:  115 EVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANIILKELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKVM 350

[Close]

BLAST of EX569167 vs. SwissProt
Match: RFCS2_MIMIV (Putative replication factor C small subunit L478 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L478 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.170e-16
Identity = 57/222 (25.68%), Postives = 108/222 (48.65%), Query Frame = 2

Query:   32 KGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQ----VRGKLYELLINCIPPXXXXXXXXXXXXXXXDAE-LKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFM 682
            K K+ FK +V+++++ L+  +Q +LRRTME+Y+  CR I+ CN+ S++ + +RSRC    +  P+ E I  V+ +I   E ++L  +    I +  N NL+ AI       +   PF        +  +E    +   I++ ++ K +F+    +R  +Y +LI  I                 D + +   +  +A+  E+ +  G++ I  IE F++  M
Sbjct:  122 KTKRKFKTIVIHNIENLANNSQAALRRTMERYAKTCRFIMVCNNLSKIMDPLRSRCRTFCVPLPTIENINTVVDYIAFMENIKLNKNDTKFILDNCNNNLKTAIWFLNCKGLNCSPF--------IALDEAFDLVVESILECRTGKNIFKIHNDIRTNIYNILITNIKGSEIINILVDKLIRKIDDDVINMNIIQYASKAEYNLTHGRRDITDIEYFISGVM 335

[Close]

BLAST of EX569167 vs. SwissProt
Match: RFCS_METMP (Replication factor C small subunit OS=Methanococcus maripaludis GN=rfcS PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.528e-16
Identity = 59/179 (32.96%), Postives = 91/179 (50.84%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPK--------RLFQVRGKLYELLIN 514
            + A+ +PI   G   FKV+ L++ D L+ +AQ++LRRTMEKYS  CR IL CN  S++   I+SRC   R +    E +VE L+ I +KE L L       I   S  ++R+AI   +T             +S    EE + ++AS    ++  K        +  + R +LY L+I+
Sbjct:   89 DFARTKPI---GDAPFKVIFLDESDALTSDAQNALRRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKTEDLVENLKDISEKENLNLEKGGIDAIIYVSEGDMRKAINVLQTA----------AAVSDEITEEIVYKVASKARPDEIKKMTQLALNGKFVEAREQLYNLMID 254

[Close]

BLAST of EX569167 vs. SwissProt
Match: RFCS_METM6 (Replication factor C small subunit OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rfcS PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.607e-16
Identity = 59/179 (32.96%), Postives = 91/179 (50.84%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPK--------RLFQVRGKLYELLIN 514
            + A+ +PI   G   FKV+ L++ D L+ +AQ++LRRTMEKYS  CR IL CN  S++   I+SRC   R +    E +VE L+ I +KE L L       I   S  ++R+AI   +T             +S    EE + ++AS    ++  K        +  + R +LY L+I+
Sbjct:   89 DFARTKPI---GDAPFKVIFLDESDALTSDAQNALRRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKTEDLVENLKDISEKETLTLEKGGIDAIIYVSEGDMRKAINVLQTA----------AAVSDTVTEEIVYKVASKARPDEIKKMTQLALNGKFVEAREQLYNLMID 254

[Close]

BLAST of EX569167 vs. TAIR peptide
Match: AT5G27740.1 (| Symbols: EMB161, EMB2775, EMB251, RFC3 | ATPase family associated with various cellular activities (AAA) | chr5:9823831-9826869 FORWARD LENGTH=354)

HSP 1 Score: 394.43 bits (1012), Expect = 4.339e-110
Identity = 191/239 (79.92%), Postives = 213/239 (89.12%), Query Frame = 2

Query:    2 EMAKNRPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPXXXXXXXXXXXXXXXDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG 718
            EMAKNRPIDTKGKKG+KVLVLN+VDKLSREAQHSLRRTMEKYS+ CRLILCCNSSS+VTEAI+SRCLNVRINAPS+E+IV+VL+F+ KKE LQLP  FAARIAEKSNR+LRRAILS ETCRVQ YPFT  Q ISPMDWEEY++EIA+D+MKEQSPK+LFQVRGK+YELL+NCIPP               D+ELK EVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMS+YK+FLI+TFG
Sbjct:  116 EMAKNRPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSRCLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQNYPFTGNQVISPMDWEEYVAEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRLLHELLKKLDSELKLEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKNFLISTFG 354

[Close]

BLAST of EX569167 vs. TAIR peptide
Match: AT1G21690.3 (| Symbols: EMB1968 | ATPase family associated with various cellular activities (AAA) | chr1:7615675-7618421 FORWARD LENGTH=341)

HSP 1 Score: 74.3294 bits (181), Expect = 9.940e-14
Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = 2

Query:   47 FKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAI 343
            FK+++L++ D ++ +AQ++LRRTME YS   R    CN  SR+ E + SRC   R    SEE +   +  I  +EGL L     + ++  S  +LRRAI
Sbjct:  116 FKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAI 214

[Close]

BLAST of EX569167 vs. TAIR peptide
Match: AT1G21690.4 (| Symbols: EMB1968 | ATPase family associated with various cellular activities (AAA) | chr1:7615675-7618362 FORWARD LENGTH=332)

HSP 1 Score: 74.3294 bits (181), Expect = 9.940e-14
Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = 2

Query:   47 FKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAI 343
            FK+++L++ D ++ +AQ++LRRTME YS   R    CN  SR+ E + SRC   R    SEE +   +  I  +EGL L     + ++  S  +LRRAI
Sbjct:  109 FKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAI 207

[Close]

BLAST of EX569167 vs. TAIR peptide
Match: AT1G21690.2 (| Symbols: EMB1968, RFC4 | ATPase family associated with various cellular activities (AAA) | chr1:7615675-7618362 FORWARD LENGTH=327)

HSP 1 Score: 74.3294 bits (181), Expect = 9.940e-14
Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = 2

Query:   47 FKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAI 343
            FK+++L++ D ++ +AQ++LRRTME YS   R    CN  SR+ E + SRC   R    SEE +   +  I  +EGL L     + ++  S  +LRRAI
Sbjct:  104 FKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAI 202

[Close]

BLAST of EX569167 vs. TAIR peptide
Match: AT1G21690.1 (| Symbols: EMB1968, RFC4 | ATPase family associated with various cellular activities (AAA) | chr1:7615675-7618362 FORWARD LENGTH=339)

HSP 1 Score: 74.3294 bits (181), Expect = 9.940e-14
Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = 2

Query:   47 FKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAI 343
            FK+++L++ D ++ +AQ++LRRTME YS   R    CN  SR+ E + SRC   R    SEE +   +  I  +EGL L     + ++  S  +LRRAI
Sbjct:  116 FKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAI 214

[Close]

BLAST of EX569167 vs. TAIR peptide
Match: AT1G63160.1 (| Symbols: RFC2 | replication factor C 2 | chr1:23422068-23423771 REVERSE LENGTH=333)

HSP 1 Score: 60.4622 bits (145), Expect = 1.485e-9
Identity = 33/98 (33.67%), Postives = 58/98 (59.18%), Query Frame = 2

Query:   50 KVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAI 343
            KV++L++ D ++  AQ +LRRT+E YS   R  L CN+S+++ E I+SRC  VR +  S++QI+  L  +   E +         I   ++ ++R+A+
Sbjct:  115 KVVILDEADSMTSGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLLVVVAAEKVPYVPEGLEAIIFTADGDMRQAL 212

[Close]

BLAST of EX569167 vs. TAIR peptide
Match: AT1G77470.1 (| Symbols: RFC3, RFC5 | replication factor C subunit 3 | chr1:29112194-29114323 REVERSE LENGTH=369)

HSP 1 Score: 57.7658 bits (138), Expect = 9.628e-9
Identity = 31/131 (23.66%), Postives = 69/131 (52.67%), Query Frame = 2

Query:   35 GKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSFAARIAEKSNRNLRRAILSFETCRVQQYPFTDKQTISPMDWEEYI 427
            GK   K+++L++ D ++++AQ +LRR +EKY+   R  L  N  +++  A++SRC   R        + + L+ + + E L +     A +   SN ++R+A+   ++  +     T++++    + + Y+
Sbjct:  135 GKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIGNHVNKIIPALQSRCTRFRFAPLDGVHMSQRLKHVIEAERLVVSDCGLAALVRLSNGDMRKALNILQSTHMASKEITEEESKQITEEDVYL 265

The following BLAST results are available for this feature:

BLAST of EX569167 vs. TrEMBL
BLAST of EX569167 vs. SwissProt
BLAST of EX569167 vs. TAIR peptide

BLAST of EX569167 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TK80_SOYBN	8.800e-119	89.96	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7U8I2_VITVI	4.230e-113	84.10	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9IPU6_POPTR	6.754e-111	83.68	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q8VXX4_ARATH	6.989e-108	79.92	Putative replication factor C OS=Arabidopsis thali...	[more]
D7M5I2_ARALY	5.009e-106	78.28	Nucleoside-triphosphatase/ nucleotide binding prot...	[more]
Q852K3_ORYSJ	3.589e-104	76.15	Activator 1 38 kDa subunit, putative, expressed OS...	[more]
Q84N07_ORYSJ	3.589e-104	76.15	Replication factor C 38 kDa subunit OS=Oryza sativ...	[more]
A2XMT5_ORYSI	3.589e-104	76.15	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B6T5I0_MAIZE	2.327e-103	75.73	Replication factor C subunit 5 OS=Zea mays PE=2 SV...	[more]
B4FER3_MAIZE	2.327e-103	75.73	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of EX569167 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RFC3_MOUSE	2.172e-71	55.79	Replication factor C subunit 3 OS=Mus musculus GN=...	[more]
RFC3_HUMAN	3.704e-71	56.22	Replication factor C subunit 3 OS=Homo sapiens GN=...	[more]
RFC3_BOVIN	6.318e-71	56.22	Replication factor C subunit 3 OS=Bos taurus GN=RF...	[more]
RFC3_DICDI	6.766e-65	50.21	Probable replication factor C subunit 3 OS=Dictyos...	[more]
RFC5_NEUCR	8.857e-57	47.03	Replication factor C subunit 5 OS=Neurospora crass...	[more]
RFC5_SCHPO	3.158e-46	44.26	Replication factor C subunit 5 OS=Schizosaccharomy...	[more]
RFC5_YEAST	7.067e-30	33.47	Replication factor C subunit 5 OS=Saccharomyces ce...	[more]
RFCS2_MIMIV	1.170e-16	25.68	Putative replication factor C small subunit L478 O...	[more]
RFCS_METMP	1.528e-16	32.96	Replication factor C small subunit OS=Methanococcu...	[more]
RFCS_METM6	2.607e-16	32.96	Replication factor C small subunit OS=Methanococcu...	[more]

BLAST of EX569167 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 7


Match Name	E-value	Identity	Description
AT5G27740.1	4.339e-110	79.92	\| Symbols: EMB161, EMB2775, EMB251, RFC3 \| ATPase ...	[more]
AT1G21690.3	9.940e-14	38.38	\| Symbols: EMB1968 \| ATPase family associated with...	[more]
AT1G21690.4	9.940e-14	38.38	\| Symbols: EMB1968 \| ATPase family associated with...	[more]
AT1G21690.2	9.940e-14	38.38	\| Symbols: EMB1968, RFC4 \| ATPase family associate...	[more]
AT1G21690.1	9.940e-14	38.38	\| Symbols: EMB1968, RFC4 \| ATPase family associate...	[more]
AT1G63160.1	1.485e-9	33.67	\| Symbols: RFC2 \| replication factor C 2 \| chr1:23...	[more]
AT1G77470.1	9.628e-9	23.66	\| Symbols: RFC3, RFC5 \| replication factor C subun...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	SUPERFAMILY	48019	DNA polymerase III clamp loader subunits, C-terminal domain	coord: 135..231 score: 9.7
IPR010372	DNA polymerase III, delta	PFAM	PF06144	DNA_pol3_delta	coord: 17..113 score: 1.2
IPR019483	DNA polymerase III, clamp-loader complex, subunit E, C-terminal	PFAM	PF10424	RFC-E_C	coord: 137..231 score: 5
None	No IPR available	GENE3D	1.10.8.60	no description	coord: 75..134 score: 7.5
None	No IPR available	GENE3D	1.20.272.10	no description	coord: 137..231 score: 1.6
None	No IPR available	GENE3D	3.40.50.300	no description	coord: 10..73 score: 4.1
None	No IPR available	PANTHER	PTHR11669	REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT	coord: 1..237 score: 5.1
None	No IPR available	SEG	seg	seg	coord: 176..190 score
None	No IPR available	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 15..136 score: 1.6

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EX569167 ID=EX569167; Name=EX569167; organism=Pisum sativum; type=EST; length=883bp
AGAAATGGCCAAGAATAGACCAATTGATACTAAAGGGAAGAAAGGATTTA
AAGTACTAGTGCTTAATGATGTTGACAAACTCTCTAGAGAAGCCCAACAT
TCTCTCCGCAGAACAATGGAGAAATACAGTGCTTATTGCAGATTAATTCT
ATGTTGCAATAGTTCTTCAAGAGTAACAGAAGCAATCCGCTCCCGTTGTC
TTAATGTACGAATAAACGCACCAAGTGAAGAACAGATTGTTGAAGTTTTA
CAGTTCATTGGTAAGAAAGAAGGACTGCAACTTCCTTCTAGTTTTGCTGC
TCGCATTGCAGAGAAATCTAACCGGAATTTAAGGAGGGCCATATTGTCAT
TTGAGACTTGCCGTGTCCAACAGTATCCTTTCACTGACAAGCAAACAATT
TCCCCAATGGACTGGGAAGAATATATTTCTGAAATTGCATCTGACATAAT
GAAGGAACAGAGCCCAAAAAGGCTGTTTCAAGTTCGGGGAAAGCTATATG
AGTTGCTGATCAATTGCATTCCTCCAGAGATTATTTTGAAGAGGCTTCTT
TATGAGCTATTAAGGAAACTAGATGCAGAACTGAAGCATGAAGTCTGCCA
CTGGGCAGCATATTATGAGCATAGGATGCGCCTTGGGCAGAAGGCAATTT
TTCACATTGAAGCATTTGTAGCGAAGTTTATGAGCGTCTATAAATCCTTC
CTCATTGCAACATTTGGCTGAAGAAAGGATGATGGTTTGCTTTTCCATGA
TACACTTTAATTGTATTAATTACTGGAAATAACTTGCATGATGAGTTTTC
TCTCATCTTTAGGTTTTCTGATCACGTATTAATACTGTAATCATGGTGGC
ATATTTCTGATGTTTTGGTTGGATAGATGTTAC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003887	DNA-directed DNA polymerase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006260	DNA replication

Vocabulary: **Cellular Component**
Term	Definition
GO:0009360	DNA polymerase III complex
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR008921	DNA_pol3_clamp-load_cplx_C
IPR010372	DNA_pol3_delta_N
IPR019483	DNA polymerase III, clamp-loader complex, subunit E, C-terminal

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