EX570635

EST Overview
NameEX570635
Unique NameEX570635
TypeEST
OrganismPisum sativum (pea)
Sequence length568
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
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BLAST of EX570635 vs. TrEMBL
Match: B9IG84_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_257681 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.921e-8
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 2 
Query:  122 SVHGNMRPHVPSIPAVSTYSVRSGGSSKSGTVSFSDSPHATSSTA 256
            S+ GN+RP + +IPA S YSVRSGGSSK  TVS  DSP ATSS A
Sbjct:  437 SISGNLRPLMTNIPASSMYSVRSGGSSKGRTVSVLDSPLATSSNA 481

HSP 2 Score: 23.483 bits (49), Expect = 4.921e-8
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1 
Query:   88 LDMAMRHMGIRK 123
            LDMA+RHM IR+
Sbjct:  425 LDMALRHMDIRR 436
The following BLAST results are available for this feature:
BLAST of EX570635 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
B9IG84_POPTR4.921e-866.67Predicted protein (Fragment) OS=Populus trichocarp... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 47..67
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570635 ID=EX570635; Name=EX570635; organism=Pisum sativum; type=EST; length=568bp
AACGATCCTTCTGCTAACAACAATTCTTATGGAAAATCTTCTTCATCTAG
TAGCACCGGATTCGGAAGCACACTTTCAAAGAAATCTTTAGATATGGCAA
TGAGGCATATGGGCATAAGGAAGCGTTCATGGTAATATGCGGCCACATGT
ACCGAGCATTCCAGCTGTGTCTACATACAGTGTGAGATCAGGAGGTTCAT
CAAAGAGCGGGACAGTGAGTTTTTCTGATTCGCCACATGCCACAAGCAGC
ACTGCTAGCTCGGAACCGAGTGTATATAATAGTAGCTCCATATCTTATGG
AAGTGAGATTGAAGAAAATGATTTTTAGAAGATGGTTTATTGAATCATCA
TCACTCATATGATTGTCAAGGCATGGTTATTACCGCCTTTGCCTTTTTTA
TTTGTATGTGGTGGAACAAATAGAACATGATACTGTTTTCCATGTGAATG
TGCTAGTGGTAGAAAGTTTGCAACATTGTCTACAAGTGTTGTGATAAAAC
GGGATGAACTTTGTTGTAGGAAACCATATAGCTATAAGTTTGTTTGTGGT
ACAAGAATCAATGTGCTG
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