EX570846

EST Overview
NameEX570846
Unique NameEX570846
TypeEST
OrganismPisum sativum (pea)
Sequence length330
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
[Close]
BLAST of EX570846 vs. TrEMBL
Match: C6TMV1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.256e-15
Identity = 38/44 (86.36%), Postives = 43/44 (97.73%), Query Frame = -1 
Query:    1 SLKVWRQGKSSLPFILGQAALSGILIWRNFQSYSLAKKIFPTGI 132
            S+KVWRQG SSLPFILGQAAL+G+LIW+NFQSYSLAKKIFP+GI
Sbjct:  153 SMKVWRQGNSSLPFILGQAALAGVLIWKNFQSYSLAKKIFPSGI 196

HSP 2 Score: 82.4185 bits (202), Expect = 1.617e-14
Identity = 37/43 (86.05%), Postives = 41/43 (95.35%), Query Frame = -1 
Query:  139 TLSLKVWRQGKSSLPFIIGQAALSGILIWKNFQSYSLAKKIFP 267
            T S+KVWRQG SSLPFI+GQAAL+G+LIWKNFQSYSLAKKIFP
Sbjct:  151 TFSMKVWRQGNSSLPFILGQAALAGVLIWKNFQSYSLAKKIFP 193
[Close]
BLAST of EX570846 vs. TrEMBL
Match: D7TSA6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_252.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00005040001 PE=4 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.795e-13
Identity = 33/43 (76.74%), Postives = 38/43 (88.37%), Query Frame = -1 
Query:    4 SLKVWRQGKSSLPFILGQAALSGILIWRNFQSYSLAKKIFPTG 132
            SLK+WRQGKSSLPF+LGQA LS  L W+NFQ+YSL KK+FPTG
Sbjct:  151 SLKIWRQGKSSLPFVLGQAVLSAALFWKNFQTYSLTKKLFPTG 193

HSP 2 Score: 76.6406 bits (187), Expect = 8.874e-13
Identity = 33/43 (76.74%), Postives = 38/43 (88.37%), Query Frame = -1 
Query:  139 TLSLKVWRQGKSSLPFIIGQAALSGILIWKNFQSYSLAKKIFP 267
            TLSLK+WRQGKSSLPF++GQA LS  L WKNFQ+YSL KK+FP
Sbjct:  149 TLSLKIWRQGKSSLPFVLGQAVLSAALFWKNFQTYSLTKKLFP 191
[Close]
BLAST of EX570846 vs. TrEMBL
Match: B9T353_RICCO (Transmembrane protein 14, putative OS=Ricinus communis GN=RCOM_0142980 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.728e-11
Identity = 30/43 (69.77%), Postives = 37/43 (86.05%), Query Frame = -1 
Query:    4 SLKVWRQGKSSLPFILGQAALSGILIWRNFQSYSLAKKIFPTG 132
            SLK+WRQGKSS+PF+LGQA LS  L W++FQ+YSL KK+ PTG
Sbjct:  145 SLKIWRQGKSSIPFVLGQAVLSAALSWKHFQAYSLTKKLIPTG 187

HSP 2 Score: 68.9366 bits (167), Expect = 1.850e-10
Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = -1 
Query:  139 LSLKVWRQGKSSLPFIIGQAALSGILIWKNFQSYSLAKKIFP 264
            LSLK+WRQGKSS+PF++GQA LS  L WK+FQ+YSL KK+ P
Sbjct:  144 LSLKIWRQGKSSIPFVLGQAVLSAALSWKHFQAYSLTKKLIP 185
[Close]
BLAST of EX570846 vs. TrEMBL
Match: B9MU46_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_826618 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.728e-11
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = -1 
Query:    4 SLKVWRQGKSSLPFILGQAALSGILIWRNFQSYSLAKKIFPTG 132
            SLK+WRQGKSSLPF+LGQA L+  L W NF++YSL KK+ PTG
Sbjct:  141 SLKIWRQGKSSLPFVLGQAVLAAALCWNNFRAYSLTKKVIPTG 183

HSP 2 Score: 68.1662 bits (165), Expect = 3.156e-10
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = -1 
Query:  139 TLSLKVWRQGKSSLPFIIGQAALSGILIWKNFQSYSLAKKIFP 267
            T SLK+WRQGKSSLPF++GQA L+  L W NF++YSL KK+ P
Sbjct:  139 TFSLKIWRQGKSSLPFVLGQAVLAAALCWNNFRAYSLTKKVIP 181
[Close]
BLAST of EX570846 vs. TrEMBL
Match: Q93V66_ARATH (AT3g57280/F28O9_130 OS=Arabidopsis thaliana GN=At3g57280 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.360e-11
Identity = 28/43 (65.12%), Postives = 37/43 (86.05%), Query Frame = -1 
Query:  139 TLSLKVWRQGKSSLPFIIGQAALSGILIWKNFQSYSLAKKIFP 267
            TLSLK+WR+GKSS P+I+GQA LS ++ WKNF +YS+ KK+FP
Sbjct:  145 TLSLKIWREGKSSFPYILGQAVLSAVVFWKNFTAYSMTKKLFP 187

HSP 2 Score: 70.0922 bits (170), Expect = 8.306e-11
Identity = 27/44 (61.36%), Postives = 37/44 (84.09%), Query Frame = -1 
Query:    1 SLKVWRQGKSSLPFILGQAALSGILIWRNFQSYSLAKKIFPTGI 132
            SLK+WR+GKSS P+ILGQA LS ++ W+NF +YS+ KK+FP G+
Sbjct:  147 SLKIWREGKSSFPYILGQAVLSAVVFWKNFTAYSMTKKLFPAGV 190
[Close]
BLAST of EX570846 vs. TrEMBL
Match: B9GZ99_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_817220 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.360e-11
Identity = 39/83 (46.99%), Postives = 48/83 (57.83%), Query Frame = -1 
Query:    4 LPF--IIGQAALSGILIWKNFQS------YSLAKKIFPMSSLKVWRQGKSSLPFILGQAALSGILIWRNFQSYSLAKKIFPTG 228
            +PF  I+    L G +  KN  S      Y  A       SLK+WRQGKSS PF+LGQA L+  L W NF++YSL KK+ PTG
Sbjct:   99 IPFGGIVLSGGLIGFVFSKNAVSLGTGVLYGGALLALSTFSLKIWRQGKSSFPFVLGQAVLAAALCWNNFRAYSLTKKLIPTG 181

HSP 2 Score: 66.2402 bits (160), Expect = 1.199e-9
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = -1 
Query:  139 TLSLKVWRQGKSSLPFIIGQAALSGILIWKNFQSYSLAKKIFP 267
            T SLK+WRQGKSS PF++GQA L+  L W NF++YSL KK+ P
Sbjct:  137 TFSLKIWRQGKSSFPFVLGQAVLAAALCWNNFRAYSLTKKLIP 179
[Close]
BLAST of EX570846 vs. TrEMBL
Match: B1N671_SOLLC (Putative uncharacterized protein OS=Solanum lycopersicum GN=LYC_68t000010 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.199e-9
Identity = 27/43 (62.79%), Postives = 36/43 (83.72%), Query Frame = -1 
Query:    4 SLKVWRQGKSSLPFILGQAALSGILIWRNFQSYSLAKKIFPTG 132
            S+KVWR+GK+S PFILGQA L+  L+W+N Q++SL  K+FPTG
Sbjct:  152 SMKVWREGKTSFPFILGQAVLAATLLWKNMQTFSLTGKLFPTG 194

HSP 2 Score: 65.0846 bits (157), Expect = 2.672e-9
Identity = 26/43 (60.47%), Postives = 36/43 (83.72%), Query Frame = -1 
Query:  139 TLSLKVWRQGKSSLPFIIGQAALSGILIWKNFQSYSLAKKIFP 267
            T+S+KVWR+GK+S PFI+GQA L+  L+WKN Q++SL  K+FP
Sbjct:  150 TISMKVWREGKTSFPFILGQAVLAATLLWKNMQTFSLTGKLFP 192
[Close]
BLAST of EX570846 vs. TrEMBL
Match: A9NYZ0_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.490e-9
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = -1 
Query:    4 MSSLKVWRQGKSSLPFILGQAALSGILIWRNFQSYSLAKKIFPTG 138
            M+SLKVWRQGKSS P+ILGQAA+S I++ R  Q +SL K +FPTG
Sbjct:  221 MTSLKVWRQGKSSTPYILGQAAISLIVLARQLQVFSLTKNVFPTG 265
[Close]
BLAST of EX570846 vs. TrEMBL
Match: Q5Z878_ORYSJ (Putative uncharacterized protein OJ1217_C01.6 OS=Oryza sativa subsp. japonica GN=OJ1217_C01.6 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.558e-9
Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = -1 
Query:   10 QGKSSLPFIIGQAALSGILIWKNFQSYS------LAKKIFPMSSLKVWRQGKSSLPFILGQAALSGILIWRNFQSYSLAKKIFP 243
            Q K  + F +G   L G L W++  S +      LA     + SLKVWR GKSSLPFIL QAA++  + W++FQ+Y+  KK+ P
Sbjct:  109 QHKGGILFSMG---LVGFLFWRSTVSLTFGVAPGLAILALGVLSLKVWRSGKSSLPFILAQAAVAAAVAWKHFQAYTTTKKLLP 189

HSP 2 Score: 61.6178 bits (148), Expect = 2.954e-8
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = -1 
Query:  139 LSLKVWRQGKSSLPFIIGQAALSGILIWKNFQSYSLAKKIFP 264
            LSLKVWR GKSSLPFI+ QAA++  + WK+FQ+Y+  KK+ P
Sbjct:  148 LSLKVWRSGKSSLPFILAQAAVAAAVAWKHFQAYTTTKKLLP 189
[Close]
BLAST of EX570846 vs. TrEMBL
Match: B8B0W5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22657 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.558e-9
Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = -1 
Query:   10 LPF--IIGQAALSGILIWKNFQSYS------LAKKIFPMSSLKVWRQGKSSLPFILGQAALSGILIWRNFQSYSLAKKIFP 228
            +PF  I+    L G L W++  S +      LA     + SLKVWR GKSSLPFIL QAA++  + W++FQ+Y+  KK+ P
Sbjct:  122 IPFGGILFSMGLVGFLFWRSTVSLTFGVAPGLAILALGVLSLKVWRSGKSSLPFILAQAAVAAAVAWKHFQAYTTTKKLLP 202

HSP 2 Score: 61.6178 bits (148), Expect = 2.954e-8
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = -1 
Query:  139 LSLKVWRQGKSSLPFIIGQAALSGILIWKNFQSYSLAKKIFP 264
            LSLKVWR GKSSLPFI+ QAA++  + WK+FQ+Y+  KK+ P
Sbjct:  161 LSLKVWRSGKSSLPFILAQAAVAAAVAWKHFQAYTTTKKLLP 202
[Close]
BLAST of EX570846 vs. TAIR peptide
Match: AT3G57280.1 (| Symbols: | Transmembrane proteins 14C | chr3:21193960-21195547 FORWARD LENGTH=226)

HSP 1 Score: 70.4774 bits (171), Expect = 2.449e-13
Identity = 28/43 (65.12%), Postives = 37/43 (86.05%), Query Frame = -1 
Query:  139 TLSLKVWRQGKSSLPFIIGQAALSGILIWKNFQSYSLAKKIFP 267
            TLSLK+WR+GKSS P+I+GQA LS ++ WKNF +YS+ KK+FP
Sbjct:  145 TLSLKIWREGKSSFPYILGQAVLSAVVFWKNFTAYSMTKKLFP 187

HSP 2 Score: 70.0922 bits (170), Expect = 3.199e-13
Identity = 27/44 (61.36%), Postives = 37/44 (84.09%), Query Frame = -1 
Query:    1 SLKVWRQGKSSLPFILGQAALSGILIWRNFQSYSLAKKIFPTGI 132
            SLK+WR+GKSS P+ILGQA LS ++ W+NF +YS+ KK+FP G+
Sbjct:  147 SLKIWREGKSSFPYILGQAVLSAVVFWKNFTAYSMTKKLFPAGV 190
The following BLAST results are available for this feature:
BLAST of EX570846 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TMV1_SOYBN4.256e-1586.36Putative uncharacterized protein OS=Glycine max PE... [more]
D7TSA6_VITVI6.795e-1376.74Whole genome shotgun sequence of line PN40024, sca... [more]
B9T353_RICCO3.728e-1169.77Transmembrane protein 14, putative OS=Ricinus comm... [more]
B9MU46_POPTR3.728e-1169.77Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q93V66_ARATH6.360e-1165.12AT3g57280/F28O9_130 OS=Arabidopsis thaliana GN=At3... [more]
B9GZ99_POPTR6.360e-1146.99Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B1N671_SOLLC1.199e-962.79Putative uncharacterized protein OS=Solanum lycope... [more]
A9NYZ0_PICSI3.490e-966.67Putative uncharacterized protein OS=Picea sitchens... [more]
Q5Z878_ORYSJ4.558e-942.86Putative uncharacterized protein OJ1217_C01.6 OS=O... [more]
B8B0W5_ORYSI4.558e-943.21Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of EX570846 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G57280.12.449e-1365.12| Symbols: | Transmembrane proteins 14C | chr3:21... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005349Uncharacterised protein family UPF0136, TransmembranePFAMPF03647Tmemb_14coord: 7..65
score: 3.3e-10coord: 68..110
score: 1.4
NoneNo IPR availableSEGsegsegcoord: 6..21
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570846 ID=EX570846; Name=EX570846; organism=Pisum sativum; type=EST; length=330bp
GATGCCGGTTGGAAATATTTTCTTTGCCAATGAGTAGCTCTGAAAGTTCC
TCCATATAAGGATCCCTGACAATGCTGCTTGTCCTAGAATAAATGGTAAA
CTTGATTTTCCTTGCCTCCAGACCTTCAAGCTACTCATTGGAAATATTTT
CTTTGCCAATGAGTAGCTCTGAAAGTTCTTCCATATAAGGATCCCTGACA
ATGCTGCTTGTCCTATAATAAATGGTAAACTTGATTTTCCTTGCCTCCAG
ACCTTCAAGCTAAGGGTGCTGAGGAATAGTAAAGCACCGCCAACGAGCAC
ACCACTGGCCAAGAAAATATTTCCAACCGG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR005349TMEM14