FG530506

EST Overview
NameFG530506
Unique NameFG530506
TypeEST
OrganismPisum sativum (pea)
Sequence length578
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
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BLAST of FG530506 vs. TrEMBL
Match: B9RJ08_RICCO (GTP binding protein, putative OS=Ricinus communis GN=RCOM_1754240 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 2.880e-7
Identity = 27/41 (65.85%), Postives = 30/41 (73.17%), Query Frame = 2 
Query:    2 KHHKKPQRAKDRSWRAGKAGKDDSDGMPIARFHQKPVNAGP 124
            KHH+KP+R KDRSWR+     DD DGMPI R  QKPVNA P
Sbjct:  555 KHHRKPKRKKDRSWRSKN---DDGDGMPIIRVFQKPVNASP 592
[Close]
BLAST of FG530506 vs. TAIR peptide
Match: AT1G08410.1 (| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:2646307-2649106 FORWARD LENGTH=589)

HSP 1 Score: 53.9138 bits (128), Expect = 7.063e-8
Identity = 24/44 (54.55%), Postives = 28/44 (63.64%), Query Frame = 2 
Query:    2 KHHKKPQRAKDRSWRAGKAGKDDSDGMPIARFHQKPVNAGPLNV 133
            K HKKPQR KDR+WR      +D DGMP  +  QKP N GPL +
Sbjct:  547 KQHKKPQRKKDRTWRV--QNTEDGDGMPSVKVFQKPANTGPLTM 588
The following BLAST results are available for this feature:
BLAST of FG530506 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
B9RJ08_RICCO2.880e-765.85GTP binding protein, putative OS=Ricinus communis ... [more]
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BLAST of FG530506 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G08410.17.063e-854.55| Symbols: | P-loop containing nucleoside triphos... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 53..74
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG530506 ID=FG530506; Name=FG530506; organism=Pisum sativum; type=EST; length=578bp
AAAGCATCACAAAAAGCCGCAGAGGGCAAAAGATCGTTCATGGAGAGCAG
GGAAAGCAGGGAAGGATGATTCAGATGGGATGCCAATTGCAAGATTCCAT
CAGAAACCAGTAAATGCAGGTCCTCTGAATGTTTGATAAGGTCATTCCCT
CTGGTTTTATGTGCAACAACTTGTCTGTTAGACCCATACATACATAGTTT
TCTCAAGTGAGCAACAGATGTAAGGCTTTGCAGGTAATTTCTCTAAACCT
CGCCTCACGAGAGGAAAAAGGAATTTGGAAAAATATTGTATTCACGACAT
TTGGTTAGTGTTTTGATTATTGGGATGAAAGTGATGTAATATGAAAATAA
GATACTTCAATTGTCCGGATTTAAGTGTGCATGTTCTCTTATGCACGTGT
TAACAAGGATAGCAGATTCTGTTGATTGAATTGCAAAGGAGGTGAAGCTT
CAATGTGATGAATATTGACATGAGACTTTAAGGCTATTTTTTATAGGCAA
ATTCTTAGGCACCCTATTGTTTTGCATGGATACTGGTACCCAACTGAGAT
GAATGAATTAGAAATTGCCATTTATCTT
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