FG531963

EST Overview
NameFG531963
Unique NameFG531963
TypeEST
OrganismPisum sativum (pea)
Sequence length447
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG531963 vs. TrEMBL
Match: Q2HT28_MEDTR (Transcription Factor IIF, Rap30/Rap74, interaction OS=Medicago truncatula GN=MtrDRAFT_AC150798g21v2 PE=4 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.963e-48
Identity = 103/151 (68.21%), Postives = 106/151 (70.20%), Query Frame = 3
Query:    6 RPWHLEDETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMKA----PTAFGEHAKLDEKESNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNRLGLNKKTGYDEDE 446
            RPW LEDETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMKA    P AFGEH KLD+KESN                                RK R   NKK  +D+DE
Sbjct:  114 RPWLLEDETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMKAANNGPAAFGEHGKLDDKESNAGGGRGRKKTGDDEDEGPSSDKGEEDEDEEVDRKKR--PNKKNTFDDDE 262          
BLAST of FG531963 vs. TrEMBL
Match: B9S068_RICCO (Tfiif-alpha, putative OS=Ricinus communis GN=RCOM_1299530 PE=4 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 9.686e-44
Identity = 93/151 (61.59%), Postives = 104/151 (68.87%), Query Frame = 3
Query:    6 RPWHLEDETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMKA----PTAFGEHAKLDEKESNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNRLGLNKKTGYDEDE 446
            RPW LEDETGQ Q+QGHLEGSQSATYYLL+ + KEFVAIPA SWYNFNKVAQYKQLTLEEAEEKM+NR+KTADGY+RWMMKA    P AFGE  KLD+K+S                                 RKNRLGLNK+ G D++E
Sbjct:  117 RPWLLEDETGQFQYQGHLEGSQSATYYLLILQGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMRNRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSGAASGRGRKKAAGDDEEGNVSDRGDEDEEEEAARKNRLGLNKRGGDDDEE 267          
BLAST of FG531963 vs. TrEMBL
Match: D7TRJ8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_187.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003352001 PE=4 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.386e-42
Identity = 93/153 (60.78%), Postives = 104/153 (67.97%), Query Frame = 3
Query:    6 RPWHLEDETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMKA----PTAFGEHAKLDEKESN--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNRLGLNKKTGYDEDE 446
            +PW LEDETGQ Q+ G LEGSQSATYYLLM + KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR++TADGYQRWMMKA    P AFGE  KLD+KE+                                   RKNRLGLNK++G D++E
Sbjct:  116 KPWLLEDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSDKAEEDEEEEAERKNRLGLNKRSGDDDEE 268          
BLAST of FG531963 vs. TrEMBL
Match: A5BCP5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003680 PE=4 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.386e-42
Identity = 93/153 (60.78%), Postives = 104/153 (67.97%), Query Frame = 3
Query:    6 RPWHLEDETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMKA----PTAFGEHAKLDEKESN--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNRLGLNKKTGYDEDE 446
            +PW LEDETGQ Q+ G LEGSQSATYYLLM + KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR++TADGYQRWMMKA    P AFGE  KLD+KE+                                   RKNRLGLNK++G D++E
Sbjct:   12 KPWLLEDETGQYQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRRTADGYQRWMMKAANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSDKAEEDEEEEAERKNRLGLNKRSGDDDEE 164          
BLAST of FG531963 vs. TrEMBL
Match: Q2HT32_MEDTR (Transcription Factor IIF, Rap30/Rap74, interaction OS=Medicago truncatula GN=MtrDRAFT_AC150798g17v2 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.116e-42
Identity = 95/151 (62.91%), Postives = 99/151 (65.56%), Query Frame = 3
Query:    6 RPWHLEDETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMKA----PTAFGEHAKLDEKESNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNRLGLNKKTGYDEDE 446
            RPW LEDETGQSQFQGHLEGSQSATYYLLMK KK          YNFNKVAQYKQLTLEEAEEKM NRKKTADGYQRWMMKA    P AFGEH KLD+KESN                                +KNR GLNKK+GYD+DE
Sbjct:  114 RPWFLEDETGQSQFQGHLEGSQSATYYLLMKGKK----------YNFNKVAQYKQLTLEEAEEKMNNRKKTADGYQRWMMKAANNGPAAFGEHWKLDDKESNAGGGRSRKKTGDDDDEGPSSDKGEEDEDEEVDKKNRHGLNKKSGYDDDE 254          
BLAST of FG531963 vs. TrEMBL
Match: B9SUD1_RICCO (Tfiif-alpha, putative OS=Ricinus communis GN=RCOM_0722120 PE=4 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.497e-40
Identity = 89/152 (58.55%), Postives = 100/152 (65.79%), Query Frame = 3
Query:    6 RPWHLEDETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMKA----PTAFGEHAKLDEKE-SNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNRLGLNKKTGYDEDE 446
            +PW LEDETGQ Q+ GHLEGSQSATYYLL+ + KEFVAIPA SWYNFNKVAQYK LTLEEAEEKMKNR+KTADGY+RWMMKA    P AFGE  K D+K+                                   RKNRLGLN++ G D+DE
Sbjct:  160 KPWLLEDETGQYQYHGHLEGSQSATYYLLILQGKEFVAIPAASWYNFNKVAQYKMLTLEEAEEKMKNRRKTADGYERWMMKAANNGPAAFGEMEKPDDKDVRTTSGRGRRKTAGDDDDEGKISDKGEEDEEEEMSRKNRLGLNRQGGGDDDE 311          
BLAST of FG531963 vs. TrEMBL
Match: B9IH94_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_254823 PE=4 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.497e-40
Identity = 92/154 (59.74%), Postives = 103/154 (66.88%), Query Frame = 3
Query:    6 RPWHLEDETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSW--YNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMKA----PTAFGEHAKLDEKES-NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNRLGLNKKTGYDEDE 446
            +PW LEDETGQSQ+QGHLEGSQSATYYLLM   KEFVAIPAGSW  YNFNKVA YKQLTLEEAEEKMKNR+KTADGY+RWMMKA      AFGE  K+D+KE  +                                RK+RLGLNK+ G D++E
Sbjct:  116 KPWLLEDETGQSQYQGHLEGSQSATYYLLMMTGKEFVAIPAGSWYVYNFNKVAHYKQLTLEEAEEKMKNRRKTADGYERWMMKAANNGAAAFGEVEKVDDKEGVSAGGRGGRRKASGDDDEGNVSDRGEEDEEEEAGRKSRLGLNKQGGGDDEE 269          
BLAST of FG531963 vs. TrEMBL
Match: D7M135_ARALY (Mutant TFIIF-alpha OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_327370 PE=4 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 8.486e-40
Identity = 90/153 (58.82%), Postives = 100/153 (65.36%), Query Frame = 3
Query:    6 RPWHLEDETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMKA----PTAFGE--HAKLDEKESNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNRLGLNKKTGYDEDE 446
            +PW LEDETGQ Q+QGHLEGSQSATYYLL+ + KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGYQRWMMKA    P  FGE  + K     S                                 RK+RLGLNKK+  D++E
Sbjct:  114 KPWILEDETGQFQYQGHLEGSQSATYYLLVMQNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPALFGEVDNDKESGGSSGGGGRGRKKSSGGDEDEGNVSDRGEEDEEEEASRKSRLGLNKKSNDDDEE 266          
BLAST of FG531963 vs. TrEMBL
Match: B9HCF8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1080142 PE=4 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.565e-38
Identity = 90/154 (58.44%), Postives = 100/154 (64.94%), Query Frame = 3
Query:    6 RPWHLEDETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSW--YNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMKA----PTAFGEHAKLDEKES-NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNRLGLNKKTGYDEDE 446
            +PW LEDETGQ Q+QGHLEGSQSATYYLLM   KEFVAIPAGSW  YNFNKVA YKQLTLEEAEEKMKNR+KTADGY+RWMMKA      AFGE  K D+K+  +                                RK+RLGLNK  G D++E
Sbjct:  116 KPWLLEDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEEKMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVSDKGEEDEEEEAGRKSRLGLNKGGGDDDEE 269          
BLAST of FG531963 vs. TrEMBL
Match: Q8LMN8_ORYSJ (Mutant TFIIF-alpha, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os10g10990 PE=4 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.890e-33
Identity = 80/153 (52.29%), Postives = 91/153 (59.48%), Query Frame = 3
Query:    6 RPWHLEDETGQSQFQGHLEGSQS--ATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMKA----PTAFGEHAKLDEKESNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNRLGLNKKTGYDEDE 446
            +PW LEDETGQ Q+QG +EGSQS  ATYYLLM   KEF A PAGSWYNF+K+AQYKQLTLEEAEEKM  RK +A GY+RWMMKA    P AFG   K  E  +                                 RKNRL LNKK+  D++E
Sbjct:  117 KPWILEDETGQYQYQGQMEGSQSSTATYYLLMMHGKEFHAYPAGSWYNFSKIAQYKQLTLEEAEEKMNKRKTSATGYERWMMKAATNGPAAFGSDVKKLEPTNGTEKENARPKKGKNNEEGNNSDKGEEDEEEEAARKNRLALNKKSMDDDEE 269          
BLAST of FG531963 vs. SwissProt
Match: T2FA_ARATH (Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 3.733e-41
Identity = 90/153 (58.82%), Postives = 100/153 (65.36%), Query Frame = 3
Query:    6 RPWHLEDETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMKA----PTAFGE--HAKLDEKESNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNRLGLNKKTGYDEDE 446
            +PW LEDETGQ Q+QGHLEGSQSATYYLL+ + KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGYQRWMMKA    P  FGE  + K     S                                 RK+RLGLN+K+  D+DE
Sbjct:  114 KPWILEDETGQFQYQGHLEGSQSATYYLLVMQNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPALFGEVDNEKESGGTSGGGGRGRKKSSGGDEEEGNVSDRGDEDEEEEASRKSRLGLNRKSNDDDDE 266          
BLAST of FG531963 vs. SwissProt
Match: T2FA_DICDI (General transcription factor IIF subunit 1 OS=Dictyostelium discoideum GN=gtf2f1 PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.998e-10
Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 3
Query:    9 PWHLEDETGQSQFQGHLEGSQ-SATYYLLMKEKKEFV-AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMK 248
            PW LED  G + +QG++EG+Q S+ Y+L M +    + A+P   WYNF    +++ LT EEAE+ MK + +  D +   + K
Sbjct:  149 PWKLEDSEGNNTYQGNVEGNQASSNYFLFMFQSDGSIKAVPCNDWYNFRPKKEFQSLTTEEAEDFMKKKNQEWDVFTSRLQK 230          
BLAST of FG531963 vs. SwissProt
Match: T2FA_SCHPO (Transcription initiation factor IIF subunit alpha OS=Schizosaccharomyces pombe GN=tfg1 PE=1 SV=2)

HSP 1 Score: 58.151 bits (139), Expect = 1.870e-8
Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 3
Query:    3 IRPWHLEDETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMK 248
            + PW +ED  G++ +   +EG QS+ Y L M  +  F  IP   +Y FN+   ++ L+++EAE KM   KKT     RW MK
Sbjct:  148 LSPWIMEDFEGKNTWVSTMEGGQSSAYVLFMFSENGFKVIPTDRFYRFNQRNNFQTLSIDEAEAKM--NKKTP--IPRWFMK 225          
BLAST of FG531963 vs. TAIR peptide
Match: AT4G12610.2 (| Symbols: RAP74, ATRAP74 | transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors | chr4:7455565-7458318 FORWARD LENGTH=506)

HSP 1 Score: 114.005 bits (284), Expect = 3.423e-26
Identity = 65/122 (53.28%), Postives = 72/122 (59.02%), Query Frame = 3
Query:   99 EKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMKA----PTAFGE--HAKLDEKESNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNRLGLNKKTGYDEDE 446
            + KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGYQRWMMKA    P  FGE  + K     S                                 RK+RLGLN+K+  D+DE
Sbjct:    2 QNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPALFGEVDNEKESGGTSGGGGRGRKKSSGGDEEEGNVSDRGDEDEEEEASRKSRLGLNRKSNDDDDE 123          
BLAST of FG531963 vs. TAIR peptide
Match: AT4G12610.1 (| Symbols: RAP74, ATRAP74 | transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors | chr4:7455565-7457465 FORWARD LENGTH=400)

HSP 1 Score: 114.005 bits (284), Expect = 3.423e-26
Identity = 65/122 (53.28%), Postives = 72/122 (59.02%), Query Frame = 3
Query:   99 EKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMKA----PTAFGE--HAKLDEKESNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNRLGLNKKTGYDEDE 446
            + KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGYQRWMMKA    P  FGE  + K     S                                 RK+RLGLN+K+  D+DE
Sbjct:    2 QNKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGPALFGEVDNEKESGGTSGGGGRGRKKSSGGDEEEGNVSDRGDEDEEEEASRKSRLGLNRKSNDDDDE 123          
The following BLAST results are available for this feature:
BLAST of FG531963 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q2HT28_MEDTR4.963e-4868.21Transcription Factor IIF, Rap30/Rap74, interaction... [more]
B9S068_RICCO9.686e-4461.59Tfiif-alpha, putative OS=Ricinus communis GN=RCOM_... [more]
D7TRJ8_VITVI2.386e-4260.78Whole genome shotgun sequence of line PN40024, sca... [more]
A5BCP5_VITVI2.386e-4260.78Putative uncharacterized protein OS=Vitis vinifera... [more]
Q2HT32_MEDTR3.116e-4262.91Transcription Factor IIF, Rap30/Rap74, interaction... [more]
B9SUD1_RICCO6.497e-4058.55Tfiif-alpha, putative OS=Ricinus communis GN=RCOM_... [more]
B9IH94_POPTR6.497e-4059.74Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7M135_ARALY8.486e-4058.82Mutant TFIIF-alpha OS=Arabidopsis lyrata subsp. ly... [more]
B9HCF8_POPTR3.565e-3858.44Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q8LMN8_ORYSJ5.890e-3352.29Mutant TFIIF-alpha, putative, expressed OS=Oryza s... [more]
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BLAST of FG531963 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
T2FA_ARATH3.733e-4158.82Transcription initiation factor IIF subunit alpha ... [more]
T2FA_DICDI1.998e-1037.80General transcription factor IIF subunit 1 OS=Dict... [more]
T2FA_SCHPO1.870e-837.80Transcription initiation factor IIF subunit alpha ... [more]
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BLAST of FG531963 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G12610.23.423e-2653.28| Symbols: RAP74, ATRAP74 | transcription activato... [more]
AT4G12610.13.423e-2653.28| Symbols: RAP74, ATRAP74 | transcription activato... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008851Transcription initiation factor IIF, alpha subunitPFAMPF05793TFIIF_alphacoord: 2..148
score: 1.7
IPR011039Transcription Factor IIF, Rap30/Rap74, interactionSUPERFAMILY50916Rap30/74 interaction domainscoord: 3..70
score: 9.5
NoneNo IPR availablePANTHERPTHR13011TFIIF-ALPHAcoord: 2..135
score: 4.2
NoneNo IPR availableSEGsegsegcoord: 100..131
score
NoneNo IPR availableSEGsegsegcoord: 15..29
score: NAcoord: 34..56
score
NoneNo IPR availableSEGsegsegcoord: 3..50
score
NoneNo IPR availableSEGsegsegcoord: 15..48
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG531963 ID=FG531963; Name=FG531963; organism=Pisum sativum; type=EST; length=447bp
AGATCAGGCCATGGCACTTGGAGGACGAAACAGGTCAGTCCCAGTTTCAG
GGTCATCTTGAAGGTTCACAATCAGCTACATATTACCTGCTAATGAAGGA
AAAGAAGGAGTTTGTGGCCATTCCTGCTGGATCCTGGTACAACTTTAACA
AGGTTGCACAATATAAGCAATTGACTTTGGAGGAAGCGGAAGAGAAGATG
AAAAATAGGAAAAAAACGGCTGATGGATATCAAAGATGGATGATGAAAGC
ACCTACTGCATTCGGTGAACATGCAAAATTAGATGAAAAGGAAAGCAATG
CAGGTGGTGGGAGAGGCAGAAAAAAAGCTGGTGATGATGATGATGAAGGT
CCTTCCTCTGATAAAGGAGAGGAAGATGAAGATGAGGAGGTAGATAGGAA
GAATAGACTTGGGCTGAATAAAAAAACTGGCTATGATGAAGATGAAG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0016563obsolete transcription activator activity
GO:0003702obsolete RNA polymerase II transcription factor activity
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0045941positive regulation of transcription
GO:0006367transcription initiation at RNA polymerase II promoter
Vocabulary: INTERPRO
TermDefinition
IPR008851TFIIF-alpha
IPR011039TFIIF_interaction