FG534072

EST Overview
NameFG534072
Unique NameFG534072
TypeEST
OrganismPisum sativum (pea)
Sequence length500
Libraries
Library NameType
LIBEST_023216 MeriT Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG534072 vs. TrEMBL
Match: C6TL42_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.274e-27
Identity = 64/79 (81.01%), Postives = 70/79 (88.61%), Query Frame = 3
Query:  165 QAGKTPDIPKDILLEVLGPSNVFKQVIKEIINSTVAEYVEKESLKVNSDMRVEQSFEDLETTFEVGEKFSFDVVLHLLK 401
            + GKTPDIPK+ILLEVLGPS VF +VIK+IINSTVAEYVEKE L V+ D+RVEQSFEDLETTFE GEKFSFDVVL L K
Sbjct:  126 KGGKTPDIPKNILLEVLGPSKVFNEVIKKIINSTVAEYVEKECLIVSKDLRVEQSFEDLETTFEEGEKFSFDVVLELQK 204          
BLAST of FG534072 vs. TrEMBL
Match: B9SX51_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0547660 PE=4 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.139e-26
Identity = 58/79 (73.42%), Postives = 69/79 (87.34%), Query Frame = 3
Query:  165 QAGKTPDIPKDILLEVLGPSNVFKQVIKEIINSTVAEYVEKESLKVNSDMRVEQSFEDLETTFEVGEKFSFDVVLHLLK 401
            + GKTPDIP+DILLEVLGPS V+K+VIK++INSTVA+YVEKE LKV+ D+R+EQSFEDLE TFE   KFSFD V+ LLK
Sbjct:  107 KGGKTPDIPRDILLEVLGPSKVYKEVIKKVINSTVAKYVEKEGLKVSKDLRIEQSFEDLEETFEPDAKFSFDAVIQLLK 185          
BLAST of FG534072 vs. TrEMBL
Match: B9N601_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_270668 PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.558e-25
Identity = 57/77 (74.03%), Postives = 67/77 (87.01%), Query Frame = 3
Query:  165 QAGKTPDIPKDILLEVLGPSNVFKQVIKEIINSTVAEYVEKESLKVNSDMRVEQSFEDLETTFEVGEKFSFDVVLHL 395
            + GKTPDIP+DILLEVLGPS V+K+VIK++INSTVAEYV+KE LKV+ D+RVEQSFEDLE  FE  EKFSFD V+ L
Sbjct:   36 KGGKTPDIPRDILLEVLGPSKVYKEVIKKVINSTVAEYVDKEGLKVSKDLRVEQSFEDLEDAFEPDEKFSFDAVIQL 112          
BLAST of FG534072 vs. TrEMBL
Match: D7T2D4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_94.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00038134001 PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.919e-25
Identity = 56/77 (72.73%), Postives = 66/77 (85.71%), Query Frame = 3
Query:  165 QAGKTPDIPKDILLEVLGPSNVFKQVIKEIINSTVAEYVEKESLKVNSDMRVEQSFEDLETTFEVGEKFSFDVVLHL 395
            + GKTPDIP+DILLEVLGPS V+ QVIK++INSTVAEYVEKE +KV+ D+RVEQSFEDLE  FE GE+F FD V+ L
Sbjct:  126 KGGKTPDIPRDILLEVLGPSKVYMQVIKKVINSTVAEYVEKEGIKVSKDLRVEQSFEDLEDAFEPGEEFRFDAVVQL 202          
BLAST of FG534072 vs. TrEMBL
Match: D7LC79_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_902063 PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.488e-20
Identity = 44/77 (57.14%), Postives = 63/77 (81.82%), Query Frame = 3
Query:  165 QAGKTPDIPKDILLEVLGPSNVFKQVIKEIINSTVAEYVEKESLKVNSDMRVEQSFEDLETTFEVGEKFSFDVVLHL 395
            + GKTP+IP+D+LLE+LG S V++QVIK++INS + +YV++E +KV  ++ VEQS+EDLE TFE GE FSFD ++ L
Sbjct:  119 KGGKTPNIPRDVLLEILGYSKVYRQVIKKLINSAIEDYVKQEDVKVGKELTVEQSYEDLEETFEPGESFSFDAIIKL 195          
BLAST of FG534072 vs. TrEMBL
Match: B6SUS1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.488e-20
Identity = 45/77 (58.44%), Postives = 62/77 (80.52%), Query Frame = 3
Query:  165 QAGKTPDIPKDILLEVLGPSNVFKQVIKEIINSTVAEYVEKESLKVNSDMRVEQSFEDLETTFEVGEKFSFDVVLHL 395
            + GKTPDIPK++ L ++GPS V K+ IK+IINSTVAEYV+KE L V+ +M+V+QS+E+LE  FE G++F FD  +HL
Sbjct:  136 KGGKTPDIPKEVALHLIGPSKVKKETIKKIINSTVAEYVQKEGLTVSKNMKVQQSYEELEAAFEPGKEFCFDATVHL 212          
BLAST of FG534072 vs. TrEMBL
Match: Q945Q5_ARATH (At2g30700/T11J7.9 OS=Arabidopsis thaliana GN=At2g30695 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.779e-20
Identity = 46/77 (59.74%), Postives = 61/77 (79.22%), Query Frame = 3
Query:  165 QAGKTPDIPKDILLEVLGPSNVFKQVIKEIINSTVAEYVEKESLKVNSDMRVEQSFEDLETTFEVGEKFSFDVVLHL 395
            + GKTP+IPKD+LLE+LG S V+KQVIK++INS + +YV++E LKV  ++ V QS+EDLE TFE GE FSFD  + L
Sbjct:  119 KGGKTPNIPKDVLLEILGYSKVYKQVIKKLINSAIEDYVKQEDLKVGKELTVVQSYEDLEETFEPGESFSFDATIKL 195          
BLAST of FG534072 vs. TrEMBL
Match: Q7F441_ORYSJ (P0696G06.13 protein OS=Oryza sativa subsp. japonica GN=P0696G06.13 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.786e-13
Identity = 39/79 (49.37%), Postives = 58/79 (73.42%), Query Frame = 3
Query:  165 QAGKTPDIPKDILLEVLGPSNVFKQVIKEIINSTVAEYVEKESLKVNSDMRVEQSFEDLETTFEVGEKFSFDVVLHLLK 401
            + G+T +IP  ILL++LG S V K V++EI++ TV ++V+KE+LKVN +++  QS E+LE++F  G  FSF VVL L K
Sbjct:  258 KGGRTSNIPSSILLQMLGKSRVTKFVLQEILSITVGDFVKKENLKVNPEIKTTQSEEELESSFTPGSSFSFSVVLQLEK 336          
BLAST of FG534072 vs. TrEMBL
Match: Q5JLV2_ORYSJ (Os01g0894700 protein OS=Oryza sativa subsp. japonica GN=B1078G07.49 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.786e-13
Identity = 39/79 (49.37%), Postives = 58/79 (73.42%), Query Frame = 3
Query:  165 QAGKTPDIPKDILLEVLGPSNVFKQVIKEIINSTVAEYVEKESLKVNSDMRVEQSFEDLETTFEVGEKFSFDVVLHLLK 401
            + G+T +IP  ILL++LG S V K V++EI++ TV ++V+KE+LKVN +++  QS E+LE++F  G  FSF VVL L K
Sbjct:  131 KGGRTSNIPSSILLQMLGKSRVTKFVLQEILSITVGDFVKKENLKVNPEIKTTQSEEELESSFTPGSSFSFSVVLQLEK 209          
BLAST of FG534072 vs. TrEMBL
Match: B9EVB7_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_04389 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.786e-13
Identity = 39/79 (49.37%), Postives = 58/79 (73.42%), Query Frame = 3
Query:  165 QAGKTPDIPKDILLEVLGPSNVFKQVIKEIINSTVAEYVEKESLKVNSDMRVEQSFEDLETTFEVGEKFSFDVVLHLLK 401
            + G+T +IP  ILL++LG S V K V++EI++ TV ++V+KE+LKVN +++  QS E+LE++F  G  FSF VVL L K
Sbjct:  300 KGGRTSNIPSSILLQMLGKSRVTKFVLQEILSITVGDFVKKENLKVNPEIKTTQSEEELESSFTPGSSFSFSVVLQLEK 378          
BLAST of FG534072 vs. TAIR peptide
Match: AT2G30695.2 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:13079269-13081095 REVERSE LENGTH=199)

HSP 1 Score: 99.7525 bits (247), Expect = 8.501e-22
Identity = 46/77 (59.74%), Postives = 61/77 (79.22%), Query Frame = 3
Query:  165 QAGKTPDIPKDILLEVLGPSNVFKQVIKEIINSTVAEYVEKESLKVNSDMRVEQSFEDLETTFEVGEKFSFDVVLHL 395
            + GKTP+IPKD+LLE+LG S V+KQVIK++INS + +YV++E LKV  ++ V QS+EDLE TFE GE FSFD  + L
Sbjct:  119 KGGKTPNIPKDVLLEILGYSKVYKQVIKKLINSAIEDYVKQEDLKVGKELTVVQSYEDLEETFEPGESFSFDATIKL 195          
BLAST of FG534072 vs. TAIR peptide
Match: AT2G30695.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 253 Blast hits to 253 proteins in 72 species: Archae - 0; Bacteria - 138; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). | chr2:13079269-13081095 REVERSE LENGTH=199)

HSP 1 Score: 99.7525 bits (247), Expect = 8.501e-22
Identity = 46/77 (59.74%), Postives = 61/77 (79.22%), Query Frame = 3
Query:  165 QAGKTPDIPKDILLEVLGPSNVFKQVIKEIINSTVAEYVEKESLKVNSDMRVEQSFEDLETTFEVGEKFSFDVVLHL 395
            + GKTP+IPKD+LLE+LG S V+KQVIK++INS + +YV++E LKV  ++ V QS+EDLE TFE GE FSFD  + L
Sbjct:  119 KGGKTPNIPKDVLLEILGYSKVYKQVIKKLINSAIEDYVKQEDLKVGKELTVVQSYEDLEETFEPGESFSFDATIKL 195          
The following BLAST results are available for this feature:
BLAST of FG534072 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TL42_SOYBN1.274e-2781.01Putative uncharacterized protein OS=Glycine max PE... [more]
B9SX51_RICCO3.139e-2673.42Putative uncharacterized protein OS=Ricinus commun... [more]
B9N601_POPTR1.558e-2574.03Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7T2D4_VITVI5.919e-2572.73Whole genome shotgun sequence of line PN40024, sca... [more]
D7LC79_ARALY7.488e-2057.14Putative uncharacterized protein OS=Arabidopsis ly... [more]
B6SUS1_MAIZE7.488e-2058.44Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
Q945Q5_ARATH9.779e-2059.74At2g30700/T11J7.9 OS=Arabidopsis thaliana GN=At2g3... [more]
Q7F441_ORYSJ1.786e-1349.37P0696G06.13 protein OS=Oryza sativa subsp. japonic... [more]
Q5JLV2_ORYSJ1.786e-1349.37Os01g0894700 protein OS=Oryza sativa subsp. japoni... [more]
B9EVB7_ORYSJ1.786e-1349.37Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of FG534072 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G30695.28.501e-2259.74| Symbols: | FUNCTIONS IN: molecular_function unk... [more]
AT2G30695.18.501e-2259.74| Symbols: | FUNCTIONS IN: molecular_function unk... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008881Trigger factor, ribosome-binding, bacterialGENE3D3.30.70.1050no descriptioncoord: 9..76
score: 0.0
IPR008881Trigger factor, ribosome-binding, bacterialPFAMPF05697Trigger_Ncoord: 9..75
score: 2.5

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG534072 ID=FG534072; Name=FG534072; organism=Pisum sativum; type=EST; length=500bp
TAATCATGATAACAATAGTAATAATAGTTAGCATAATGACAATGAATGTT
CCAAAAGATTTTTCTTTCTAATCTAACTATATTTTATTTATCCTTATATT
GAAAGATTTTTGACAAATTTCATATGTTTGTTTGTCAATTCAATTGCTGC
TCAAAAATTGAGGACAAGCAGGAAAAACGCCAGATATACCAAAAGACATT
TTATTAGAGGTGTTAGGACCTTCCAATGTGTTTAAGCAAGTTATCAAGGA
AATCATCAACTCAACTGTAGCTGAGTATGTGGAGAAGGAGAGTTTAAAAG
TCAACAGCGACATGAGAGTTGAGCAAAGCTTTGAAGATCTTGAAACTACA
TTTGAGGTAGGAGAGAAGTTTAGCTTTGATGTTGTACTTCATCTTCTAAA
GTAGAATTGACATGCATTGATATGCTAAAATCGTATCGGATAGAATGATG
TTGCTCAATCAGCAAGTACCAAGGAATCTCTTAAATATATATGATTCTAG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0015031protein transport
Vocabulary: INTERPRO
TermDefinition
IPR008881Trigger_fac_ribosome-bd_bac