FG534087

EST Overview


Name	FG534087
Unique Name	FG534087
Type	EST
Organism	Pisum sativum (pea)
Sequence length	559

Libraries


Library Name	Type
LIBEST_023216 MeriT Pisum sativum Shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

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BLAST of FG534087 vs. TrEMBL
Match: Q2HS43_MEDTR (Zinc finger, RING-type; Thioredoxin-related OS=Medicago truncatula GN=MtrDRAFT_AC157503g6v2 PE=4 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.329e-48
Identity = 100/146 (68.49%), Postives = 105/146 (71.92%), Query Frame = 2

Query:    2 MHCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETRLSGQTDEEAVGLTIWRLPXXXXXXXXXXXXXXXXEIQLPVVYTEMDGGNNSNEDSRSISLAVGSXXXXXXXXXXXXXXXXLSFFGSV 439
            +HCAVCKE FELGSEARKMPC HLYHSDCILPWLSMRNSCPVCRHELPSD  QN SE+R+SGQ DEEAVGLTIWRLP                EIQLP+VYTEMD GNNSNEDSR ISL VGS                LSFFG+V
Sbjct:  187 IHCAVCKEQFELGSEARKMPCNHLYHSDCILPWLSMRNSCPVCRHELPSD--QNASESRISGQIDEEAVGLTIWRLPGGGFAVGRFAGGRRAGEIQLPIVYTEMD-GNNSNEDSRRISLTVGSNRVRERRGIRRIFRNFLSFFGNV 329

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BLAST of FG534087 vs. TrEMBL
Match: D7TLR2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_19.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016510001 PE=4 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.773e-36
Identity = 73/117 (62.39%), Postives = 82/117 (70.09%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETRLSGQTDEEAVGLTIWRLPXXXXXXXXXXXXXXXXEIQLPVVYTEMDGGNNSNEDSRSIS 355
            HCAVCKE FELG+EAR+MPCKH+YHSDCILPWLS+RNSCPVCRHELPS++  +P       QT EE VGLTIWRLP                E +LPVVYTEMDGG N+    R IS
Sbjct:  160 HCAVCKEPFELGAEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPSEERNSPESNE---QTPEETVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTEMDGGFNNGGAPRRIS 273

[Close]

BLAST of FG534087 vs. TrEMBL
Match: A5BM57_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016758 PE=4 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.773e-36
Identity = 73/117 (62.39%), Postives = 82/117 (70.09%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETRLSGQTDEEAVGLTIWRLPXXXXXXXXXXXXXXXXEIQLPVVYTEMDGGNNSNEDSRSIS 355
            HCAVCKE FELG+EAR+MPCKH+YHSDCILPWLS+RNSCPVCRHELPS++  +P       QT EE VGLTIWRLP                E +LPVVYTEMDGG N+    R IS
Sbjct:  179 HCAVCKEPFELGAEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPSEERNSPESNE---QTPEETVGLTIWRLPGGGFAVGRFSGGRRGGERELPVVYTEMDGGFNNGGAPRRIS 292

[Close]

BLAST of FG534087 vs. TrEMBL
Match: A5BC54_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022309 PE=4 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.914e-34
Identity = 73/126 (57.94%), Postives = 85/126 (67.46%), Query Frame = 2

Query:    2 MHCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSD------QSQNPSETRLSGQTDEEAVGLTIWRLPXXXXXXXXXXXXXXXXEIQLPVVYTEMDGGNNSNEDSRSISLA 361
            +HCAVCKEAF+LGSEAR+MPCKH+YHSDCILPWLS+RNSCPVCRHELP+D         + +E       +EE VGLTIWRLP                E +LPVVYTEMDGG N++   R IS A
Sbjct:  296 LHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPTDVPGTRNSPVSGTEALSPAPNEEETVGLTIWRLPGGGFAVGRFSGGRRAGERELPVVYTEMDGGFNNSGAPRRISWA 421

[Close]

BLAST of FG534087 vs. TrEMBL
Match: D7SKC2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024920001 PE=4 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.241e-33
Identity = 71/120 (59.17%), Postives = 82/120 (68.33%), Query Frame = 2

Query:    2 MHCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETRLSGQTDEEAVGLTIWRLPXXXXXXXXXXXXXXXXEIQLPVVYTEMDGGNNSNEDSRSISLA 361
            +HCAVCKEAF+LGSEAR+MPCKH+YHSDCILPWLS+RNSCPVCRHELP+D         + G  +   VGLTIWRLP                E +LPVVYTEMDGG N++   R IS A
Sbjct:  302 LHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPTD---------VPGTRNSPTVGLTIWRLPGGGFAVGRFSGGRRAGERELPVVYTEMDGGFNNSGAPRRISWA 412

[Close]

BLAST of FG534087 vs. TrEMBL
Match: A5B8X0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000345 PE=4 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.241e-33
Identity = 70/116 (60.34%), Postives = 81/116 (69.83%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETRLS--GQTDEEAVGLTIWRLPXXXXXXXXXXXXXXXXEIQLPVVYTEMDGGNNSNEDSR 346
            HCAVCKE FEL SEAR++PCKH+YHSDCILPWLS+RNSCPVCRHELP+D  +  S   L   G T+E+ VGLTIWRLP                E +LPVV+TEMDGG N +  SR
Sbjct:  185 HCAVCKEPFELDSEARELPCKHIYHSDCILPWLSLRNSCPVCRHELPTDSHEGGSSGHLQSXGLTEEDNVGLTIWRLPGGGFAVGRFTGGRQAAERELPVVFTEMDGGFNPSGASR 300

[Close]

BLAST of FG534087 vs. TrEMBL
Match: B9T010_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0040730 PE=4 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.159e-33
Identity = 71/117 (60.68%), Postives = 79/117 (67.52%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETRLSGQTDEEAVGLTIWRLPXXXXXXXXXXXXXXXXEIQLPVVYTEMDGGNNSNEDSRSIS 355
            HCAVCKEAFEL SEAR+MPCKH+YH++CILPWLS+RNSCPVCRHELP+D   N         ++E AVGLTIWRLP                  QLPVVYTEMDGG NS    R IS
Sbjct:  186 HCAVCKEAFELDSEAREMPCKHIYHNECILPWLSIRNSCPVCRHELPADGDVNEENHNNDNNSNEAAVGLTIWRLPGGGYAVGRFSD-------QLPVVYTEMDGGFNSGGLPRRIS 295

[Close]

BLAST of FG534087 vs. TrEMBL
Match: Q94HJ7_ORYSA (Putative RING-H2 finger protein OS=Oryza sativa PE=4 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.050e-32
Identity = 69/118 (58.47%), Postives = 81/118 (68.64%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQ-NPSETRLSGQTDEEAVGLTIWRLPXXXXXXXXXXXXXXXXEIQLPVVYTEMDGGNNSNEDSRSIS 355
            HCAVCKE FELG EAR+MPC H+YH DCILPWL++RNSCPVCRHE+P+D ++  PS    +  T+EE VGLTIWRLP                E +LPVVYTEMDGG N+    R IS
Sbjct:  195 HCAVCKEPFELGDEAREMPCSHIYHQDCILPWLALRNSCPVCRHEMPTDAARPRPS----NAGTEEETVGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYTEMDGGFNNGGAPRRIS 308

[Close]

BLAST of FG534087 vs. TrEMBL
Match: Q65XW6_ORYSJ (Os05g0110000 protein OS=Oryza sativa subsp. japonica GN=P0016H04.2 PE=4 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.050e-32
Identity = 69/118 (58.47%), Postives = 81/118 (68.64%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQ-NPSETRLSGQTDEEAVGLTIWRLPXXXXXXXXXXXXXXXXEIQLPVVYTEMDGGNNSNEDSRSIS 355
            HCAVCKE FELG EAR+MPC H+YH DCILPWL++RNSCPVCRHE+P+D ++  PS    +  T+EE VGLTIWRLP                E +LPVVYTEMDGG N+    R IS
Sbjct:  142 HCAVCKEPFELGDEAREMPCSHIYHQDCILPWLALRNSCPVCRHEMPTDAARPRPS----NAGTEEETVGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYTEMDGGFNNGGAPRRIS 255

[Close]

BLAST of FG534087 vs. TrEMBL
Match: B9FKA4_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_16849 PE=4 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.050e-32
Identity = 69/118 (58.47%), Postives = 81/118 (68.64%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQ-NPSETRLSGQTDEEAVGLTIWRLPXXXXXXXXXXXXXXXXEIQLPVVYTEMDGGNNSNEDSRSIS 355
            HCAVCKE FELG EAR+MPC H+YH DCILPWL++RNSCPVCRHE+P+D ++  PS    +  T+EE VGLTIWRLP                E +LPVVYTEMDGG N+    R IS
Sbjct:   52 HCAVCKEPFELGDEAREMPCSHIYHQDCILPWLALRNSCPVCRHEMPTDAARPRPS----NAGTEEETVGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYTEMDGGFNNGGAPRRIS 165

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BLAST of FG534087 vs. SwissProt
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.548e-18
Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 2

Query:    8 CAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSD 151
            CAVC + FE G+EA++MPCKHLYH DC+LPWL + NSCPVCRHELP+D
Sbjct:  224 CAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTD 271

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BLAST of FG534087 vs. SwissProt
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.398e-16
Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 2

Query:    8 CAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSD 151
            CAVC + FE GS+ ++MPCKH++H DC+LPWL + NSCPVCR ELP+D
Sbjct:  216 CAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTD 263

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BLAST of FG534087 vs. SwissProt
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.380e-14
Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 2

Query:    2 MHCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETR 178
            M CAVCK+   +G   +K+PC H YH DCI+PWL  RNSCPVCR +L +D ++   E +
Sbjct:  255 MVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEEERK 313

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BLAST of FG534087 vs. SwissProt
Match: RN181_XENTR (E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.108e-14
Identity = 30/53 (56.60%), Postives = 38/53 (71.70%), Query Frame = 2

Query:    2 MHCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQ 160
            + C VC   FE G   R++PC+HL+HS CILPWL   NSCP+CRHELP+D  +
Sbjct:   77 LKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHELPTDSPE 129

[Close]

BLAST of FG534087 vs. SwissProt
Match: RN181_XENLA (E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.924e-14
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 2

Query:    2 MHCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSD 151
            + C VC   FE G   R++PC+HL+HS CILPWL   NSCP+CRHELP+D
Sbjct:   77 LKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNSCPLCRHELPTD 126

[Close]

BLAST of FG534087 vs. SwissProt
Match: AIP2_ARATH (E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.043e-14
Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = 2

Query:    8 CAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETRLSGQTDEEAVG 211
            C +CKE   +G + +++PCKH +H  C+ PWL   NSCP+CRHELP+D  +  +      + +EE  G
Sbjct:  230 CCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDQKYENWKEREKEAEEERKG 297

[Close]

BLAST of FG534087 vs. SwissProt
Match: RN181_BOVIN (E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.015e-13
Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 2

Query:    2 MHCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSD 151
            + C VC   FE    A +MPC HL+HS+CILPWLS  NSCP+CRHELP+D
Sbjct:   74 LKCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTD 123

[Close]

BLAST of FG534087 vs. SwissProt
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.437e-13
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 2

Query:    2 MHCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSD 151
            + C VC   FE      +MPC HL+HS+CILPWLS  NSCP+CRHELP+D
Sbjct:   86 LKCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTD 135

[Close]

BLAST of FG534087 vs. SwissProt
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.862e-13
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 2

Query:    2 MHCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSD 151
            + C VC   FE      +MPC HL+HS+CILPWLS  NSCP+CRHELP+D
Sbjct:   86 LKCPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTD 135

[Close]

BLAST of FG534087 vs. SwissProt
Match: RN181_HUMAN (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.306e-12
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 2

Query:    2 MHCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSD 151
            + C VC   FE    A +MPC HL+HS CILPWLS  NSCP+CR+ELP+D
Sbjct:   74 LKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCRYELPTD 123

[Close]

BLAST of FG534087 vs. TAIR peptide
Match: AT3G46620.1 (| Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr3:17178837-17180024 REVERSE LENGTH=395)

HSP 1 Score: 127.487 bits (319), Expect = 4.783e-30
Identity = 65/118 (55.08%), Postives = 74/118 (62.71%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETRLSGQTDEEAVGLTIWRLPXXXXXXXXXXXXXXXXEIQLPVVYTEMDGGN-NSNEDSRSIS 355
            +CAVC E FE G E R+MPCKH++H DCI+PWLS+RNSCPVCR ELPSD  Q  +E       +E AVG+TIWRLP                E  LPVV TEMDGG   SNE  R IS
Sbjct:  214 NCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSDPIQRSNE-------EEHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMDGGGLGSNEGPRRIS 324

[Close]

BLAST of FG534087 vs. TAIR peptide
Match: AT5G59550.1 (| Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr5:23998422-23999645 REVERSE LENGTH=407)

HSP 1 Score: 123.25 bits (308), Expect = 9.020e-29
Identity = 62/119 (52.10%), Postives = 76/119 (63.87%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETRLSGQTDEEAVGLTIWRLPXXXXXXXXXXXXXXXXEIQLPVVYTEMDGG--NNSNEDSRSIS 355
            +CAVC E FE  +EAR+MPCKHL+H DCI+PWLS+RNSCPVCR ELPS+ ++     R +   ++ AVG+TIWRLP                E  LPVV TEMDGG   NS +  R IS
Sbjct:  198 NCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNR-----RSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDGPRRIS 311

[Close]

BLAST of FG534087 vs. TAIR peptide
Match: AT2G39720.1 (| Symbols: RHC2A | RING-H2 finger C2A | chr2:16567506-16568711 REVERSE LENGTH=401)

HSP 1 Score: 123.25 bits (308), Expect = 9.020e-29
Identity = 58/117 (49.57%), Postives = 73/117 (62.39%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETRLSGQT------DEEAVGLTIWRLPXXXXXXXXXXXXXXXXEIQLPVVYTEMDGGNNSNE 337
            HCAVCKE F L S AR+MPC H+YH DCILPWL++RNSCPVCRHELP++   + +   L+  T      ++ A GLTIWRLP                +  +PVVYTE+DGG   +E
Sbjct:  200 HCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWRGGDRMMPVVYTEVDGGRLGDE 316

[Close]

BLAST of FG534087 vs. TAIR peptide
Match: AT3G10815.1 (| Symbols: | RING/U-box superfamily protein | chr3:3385009-3385608 REVERSE LENGTH=199)

HSP 1 Score: 92.4337 bits (228), Expect = 1.705e-19
Identity = 35/53 (66.04%), Postives = 46/53 (86.79%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQN 163
            +C VC++ FE+GS+ARKMPCKH+YHS+CILPWL  RN+CPVCR ELP D++ +
Sbjct:  120 YCPVCQDQFEIGSDARKMPCKHIYHSECILPWLVQRNTCPVCRKELPQDRNNS 172

[Close]

BLAST of FG534087 vs. TAIR peptide
Match: AT2G40830.3 (| Symbols: RHC1A | RING-H2 finger C1A | chr2:17043642-17044628 FORWARD LENGTH=328)

HSP 1 Score: 92.0485 bits (227), Expect = 2.227e-19
Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETR 178
            +C VCK+ FELGSEA++MPC H+YHSDCI+PWL   NSCPVCR ELPS    + S+ R
Sbjct:  189 NCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNR 246

[Close]

BLAST of FG534087 vs. TAIR peptide
Match: AT2G40830.1 (| Symbols: RHC1A | RING-H2 finger C1A | chr2:17043642-17044628 FORWARD LENGTH=328)

HSP 1 Score: 92.0485 bits (227), Expect = 2.227e-19
Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETR 178
            +C VCK+ FELGSEA++MPC H+YHSDCI+PWL   NSCPVCR ELPS    + S+ R
Sbjct:  189 NCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNR 246

[Close]

BLAST of FG534087 vs. TAIR peptide
Match: AT2G40830.2 (| Symbols: RHC1A | RING-H2 finger C1A | chr2:17043642-17044628 FORWARD LENGTH=328)

HSP 1 Score: 92.0485 bits (227), Expect = 2.227e-19
Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETR 178
            +C VCK+ FELGSEA++MPC H+YHSDCI+PWL   NSCPVCR ELPS    + S+ R
Sbjct:  189 NCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNR 246

[Close]

BLAST of FG534087 vs. TAIR peptide
Match: AT3G56580.3 (| Symbols: | RING/U-box superfamily protein | chr3:20962563-20963525 FORWARD LENGTH=320)

HSP 1 Score: 90.1225 bits (222), Expect = 8.462e-19
Identity = 37/64 (57.81%), Postives = 48/64 (75.00%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETRLSGQTD 196
            HC VCK+ FEL SEA++MPC H+YHSDCI+PWL   NSCPVCR ELPS  S + +++  +  T+
Sbjct:  185 HCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRGSSSSTQSSQNRSTN 248

[Close]

BLAST of FG534087 vs. TAIR peptide
Match: AT3G56580.1 (| Symbols: | RING/U-box superfamily protein | chr3:20962563-20963525 FORWARD LENGTH=320)

HSP 1 Score: 90.1225 bits (222), Expect = 8.462e-19
Identity = 37/64 (57.81%), Postives = 48/64 (75.00%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETRLSGQTD 196
            HC VCK+ FEL SEA++MPC H+YHSDCI+PWL   NSCPVCR ELPS  S + +++  +  T+
Sbjct:  185 HCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRGSSSSTQSSQNRSTN 248

[Close]

BLAST of FG534087 vs. TAIR peptide
Match: AT3G56580.2 (| Symbols: | RING/U-box superfamily protein | chr3:20962563-20963525 FORWARD LENGTH=320)

HSP 1 Score: 90.1225 bits (222), Expect = 8.462e-19
Identity = 37/64 (57.81%), Postives = 48/64 (75.00%), Query Frame = 2

Query:    5 HCAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHELPSDQSQNPSETRLSGQTD 196
            HC VCK+ FEL SEA++MPC H+YHSDCI+PWL   NSCPVCR ELPS  S + +++  +  T+
Sbjct:  185 HCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRGSSSSTQSSQNRSTN 248

The following BLAST results are available for this feature:

BLAST of FG534087 vs. TrEMBL
BLAST of FG534087 vs. SwissProt
BLAST of FG534087 vs. TAIR peptide

BLAST of FG534087 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q2HS43_MEDTR	2.329e-48	68.49	Zinc finger, RING-type; Thioredoxin-related OS=Med...	[more]
D7TLR2_VITVI	7.773e-36	62.39	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BM57_VITVI	7.773e-36	62.39	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5BC54_VITVI	1.914e-34	57.94	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7SKC2_VITVI	1.241e-33	59.17	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5B8X0_VITVI	1.241e-33	60.34	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9T010_RICCO	6.159e-33	60.68	Zinc finger protein, putative OS=Ricinus communis ...	[more]
Q94HJ7_ORYSA	1.050e-32	58.47	Putative RING-H2 finger protein OS=Oryza sativa PE...	[more]
Q65XW6_ORYSJ	1.050e-32	58.47	Os05g0110000 protein OS=Oryza sativa subsp. japoni...	[more]
B9FKA4_ORYSJ	1.050e-32	58.47	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of FG534087 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RING1_GOSHI	3.548e-18	72.92	E3 ubiquitin-protein ligase RING1 OS=Gossypium hir...	[more]
RNG1L_ARATH	7.398e-16	64.58	E3 ubiquitin-protein ligase RING1-like OS=Arabidop...	[more]
CIP8_ARATH	2.380e-14	50.85	E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis th...	[more]
RN181_XENTR	3.108e-14	56.60	E3 ubiquitin-protein ligase RNF181 OS=Xenopus trop...	[more]
RN181_XENLA	6.924e-14	60.00	E3 ubiquitin-protein ligase RNF181 OS=Xenopus laev...	[more]
AIP2_ARATH	9.043e-14	41.18	E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis th...	[more]
RN181_BOVIN	2.015e-13	62.00	E3 ubiquitin-protein ligase RNF181 OS=Bos taurus G...	[more]
RN181_MOUSE	3.437e-13	60.00	E3 ubiquitin-protein ligase RNF181 OS=Mus musculus...	[more]
RN181_RAT	5.862e-13	60.00	E3 ubiquitin-protein ligase RNF181 OS=Rattus norve...	[more]
RN181_HUMAN	1.306e-12	60.00	E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens...	[more]

BLAST of FG534087 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT3G46620.1	4.783e-30	55.08	\| Symbols: \| zinc finger (C3HC4-type RING finger)...	[more]
AT5G59550.1	9.020e-29	52.10	\| Symbols: \| zinc finger (C3HC4-type RING finger)...	[more]
AT2G39720.1	9.020e-29	49.57	\| Symbols: RHC2A \| RING-H2 finger C2A \| chr2:16567...	[more]
AT3G10815.1	1.705e-19	66.04	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT2G40830.3	2.227e-19	63.79	\| Symbols: RHC1A \| RING-H2 finger C1A \| chr2:17043...	[more]
AT2G40830.1	2.227e-19	63.79	\| Symbols: RHC1A \| RING-H2 finger C1A \| chr2:17043...	[more]
AT2G40830.2	2.227e-19	63.79	\| Symbols: RHC1A \| RING-H2 finger C1A \| chr2:17043...	[more]
AT3G56580.3	8.462e-19	57.81	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT3G56580.1	8.462e-19	57.81	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT3G56580.2	8.462e-19	57.81	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	no description	coord: 3..43 score: 2.1
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 3..44 score: 12
IPR010543	Domain of unknown function DUF1117	PFAM	PF06547	DUF1117	coord: 68..168 score: 7.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	no description	coord: 2..57 score: 1.9
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 3..43 score: 2
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 1..171 score: 1.7
None	No IPR available	SEG	seg	seg	coord: 78..93 score: NAcoord: 124..139 score: NAcoord: 147..168 score
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 2..70 score: 1.5
None	No IPR available	SEG	seg	seg	coord: 14..32 score: NAcoord: 47..61 score: NAcoord: 66..77 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG534087 ID=FG534087; Name=FG534087; organism=Pisum sativum; type=EST; length=559bp
AATGCACTGTGCGGTTTGCAAGGAAGCATTCGAGCTTGGTTCAGAGGCGC
GTAAGATGCCGTGCAAGCACCTTTACCATTCTGATTGCATTCTCCCATGG
CTGTCTATGCGAAATTCGTGCCCGGTCTGCCGCCACGAGTTACCTTCCGA
TCAAAGCCAAAATCCCTCGGAGACTAGATTATCTGGTCAGACTGACGAAG
AAGCGGTTGGATTGACGATATGGAGATTACCTGGAGGCGGATTCGCCGTC
GGGAGATTCACCGGTGGTCGGAGAGCCGGTGAGATTCAGTTACCGGTTGT
TTACACAGAGATGGACGGCGGTAATAACTCTAACGAAGATTCTAGAAGCA
TCTCTTTGGCAGTGGGAAGCAATAGAGTTAGAGAGAGACGTGGAATTCGC
AGAATTTTTCGAAATTTTCTATCCTTTTTTGGTTCCGTTAATTTAAACCG
TAGCTTTTCTGGTTCTGGTTCATTGTTTAGTAGAAGTTCACGGAGAAGAA
GCAGAACTTGGGTCACGGAATAATTATTTGGAAAGCAATTAAATTAAATT
CTTCATTTC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR010543	DUF1117
IPR013083	Znf_RING/FYVE/PHD
IPR018957	Znf_C3HC4_RING-type

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