FG534120

EST Overview
NameFG534120
Unique NameFG534120
TypeEST
OrganismPisum sativum (pea)
Sequence length448
Libraries
Library NameType
LIBEST_023216 MeriT Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
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BLAST of FG534120 vs. Lotus protein
Match: chr3.CM0996.530.r2.a (+ phase: 0 )

HSP 1 Score: 62.3882 bits (150), Expect = 7.233e-11
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 1 
Query:    1 LYDKYIGCMNGTLEEIISLCSSQDHSVAFPML 96
            +YD+Y  CMNGTLEEIISLCSSQDHSVAFPML
Sbjct:  308 VYDRYRDCMNGTLEEIISLCSSQDHSVAFPML 339
[Close]
BLAST of FG534120 vs. Soybean peptides
Match: Glyma15g41820.1|PACid:16300766 ()

HSP 1 Score: 55.8398 bits (133), Expect = 1.655e-8
Identity = 25/32 (78.12%), Postives = 28/32 (87.50%), Query Frame = 1 
Query:    1 LYDKYIGCMNGTLEEIISLCSSQDHSVAFPML 96
            LYD+Y  CMNGTLEEIISLC +QD+SV FPML
Sbjct:   36 LYDRYRDCMNGTLEEIISLCCTQDNSVPFPML 67
[Close]
BLAST of FG534120 vs. Medicago proteins
Match: IMGA|Medtr2g064090.1 (NAC domain protein IPR003441 (AHRD V1 ***- B9HYC2_POPTR); contains Interpro domain(s) IPR003441 No apical meristem (NAM) protein chr02_pseudomolecule_IMGAG_V3.5 20350020-20353883 E EGN_Mt100125 20100825)

HSP 1 Score: 63.1586 bits (152), Expect = 6.219e-11
Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 1 
Query:    1 LYDKYIGCMNGTLEEIISLCSSQDHSVAFPM 93
            LYDKY  CMNGTLEEIISLCSSQDHSVAFPM
Sbjct:  315 LYDKYRDCMNGTLEEIISLCSSQDHSVAFPM 345
The following BLAST results are available for this feature:
BLAST of FG534120 vs. Lotus protein
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins)
Total hits: 1
Match NameE-valueIdentityDescription
chr3.CM0996.530.r2.a7.233e-1187.50+ phase: 0 [more]
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BLAST of FG534120 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides)
Total hits: 1
Match NameE-valueIdentityDescription
Glyma15g41820.1|PACid:163007661.655e-878.13[more]
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BLAST of FG534120 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 1
Match NameE-valueIdentityDescription
IMGA|Medtr2g064090.16.219e-1193.55NAC domain protein IPR003441 (AHRD V1 ***- B9HYC2_... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 11..35
score

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 11..35
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG534120 ID=FG534120; Name=FG534120; organism=Pisum sativum; type=EST; length=448bp
TTGTACGACAAATACATTGGCTGTATGAATGGAACACTAGAAGAAATCAT
TTCTCTATGTTCCTCTCAAGATCATTCTGTGGCTTTTCCAATGCTATAGA
ATGATTACTATACTAACACAAAATGCATGACTCAAACTATATAGTATATC
ATATCACTTAATATTCATTGACAGAGAGAAACTTGTGTTGGCTAAAATAA
TTACCACACAAAATGGGAATTTTTTTGTTTTTGTTTTTTGAAGCCGCATA
GTAGAGGCTACTACACATATGGTGTACTGGATAGACGGTAGAATATGCTA
GCCAAGGAGGCTAGTTGGGATATTTTTATTTTATTTTGTTTTTTTCTTCT
TCTTTTTCATAGGTTTTTCTTAAGTATATTTATTAGAATATTACATAATA
TTGTATGTTGGTGTTCCACTGTTTTGTATGCTATGGAAGCAAATGGAT
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