CD859500

EST Overview
NameCD859500
Unique NameCD859500
TypeEST
OrganismPisum sativum (pea)
Sequence length289
Libraries
Library NameType
LIBEST_014000 F15cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of CD859500 vs. TrEMBL
Match: B9GUU1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_709990 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.004e-8
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 3
Query:   18 DGP--MRVKMRLPKAQLEKLMEESNDKAEVAEKIMSLYMETSXXXXXDAVEHDGVV--------LSQNRKPRGKRVSFSPMEIEESHVAAAS 263
            DGP  +RVK+RLPKAQ++KL+EES D+AEVAEKI+ LYM+ S     +  +H+  V        ++++ K   KRVSF P E  E  +A AS
Sbjct:  126 DGPNTVRVKVRLPKAQVQKLVEESKDEAEVAEKIIDLYMDNSGEANGEH-DHNRHVQWQPELGSITESFKTTKKRVSFVPEE-GEIRLAVAS 215          
BLAST of CD859500 vs. TrEMBL
Match: B9HW76_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_805134 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.985e-8
Identity = 42/88 (47.73%), Postives = 51/88 (57.95%), Query Frame = 3
Query:   21 GPMRVKMRLPKAQLEKLMEESNDKAEVAEKIMSLYM-ETSXXXXXDAVEH-----DGVVLSQN-RKPRGKRVSFSPMEIEESHVAAAS 263
            G MRVKMRLPKA++EKLM+ES D+ E A KI+ L M  T+         H      G V SQ   K R KRVSF P+   E+ +A AS
Sbjct:  127 GAMRVKMRLPKAEVEKLMQESKDETEAAAKIVDLCMANTAESALLQQQVHWKSAGHGRVSSQGIIKAREKRVSFLPVNEGETQIAVAS 214          
BLAST of CD859500 vs. TrEMBL
Match: B9HJA1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_803598 PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.450e-7
Identity = 40/88 (45.45%), Postives = 46/88 (52.27%), Query Frame = 3
Query:   21 GPMRVKMRLPKAQLEKLMEESNDKAEVAEKIMSLYMET-------SXXXXXDAVEHDGVVLSQNRKPRGKRVSFSPMEIEESHVAAAS 263
            G MRVKMRLPK Q+EKLM+ES D+AE A KI+ L M         S      +  H  V      K R KRVSF P    E  +A AS
Sbjct:  127 GAMRVKMRLPKEQVEKLMQESKDEAEAAAKILDLCMANTAGESGLSQQVHWKSGGHGRVGNQGIIKAREKRVSFLPFSEGEMQIAVAS 214          
BLAST of CD859500 vs. TrEMBL
Match: Q8LGT5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.512e-7
Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 3
Query:   21 GPMRVKMRLPKAQLEKLMEESNDKAEVAEKIMSLYMETSXXXXXDAVEHDGVV---LSQNRKPRGKRVSFSPMEIEESHVAAAS 263
            G +R+KMRLPKA++E+LM     +AE AEKIM L M  +     +A   DG V   + ++ K R KRVSF P+    S +A AS
Sbjct:  129 GGVRLKMRLPKAEVERLMRGCETEAEAAEKIMGLCM-ANNGGGVEARNGDGEVKGRVGESTKAREKRVSFMPINEGGSPIAVAS 211          
BLAST of CD859500 vs. TAIR peptide
Match: AT5G37840.1 (| Symbols: | BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:15062192-15063327 REVERSE LENGTH=214)

HSP 1 Score: 54.299 bits (129), Expect = 1.832e-8
Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 3
Query:   21 GPMRVKMRLPKAQLEKLMEESNDKAEVAEKIMSLYMETSXXXXXDAVEHDGV-------VLSQNRKPRGKRVSFS 224
            G  RV++RLP++Q+ KLMEES+D +EVA KI+S YME+S        ++DG+        ++ + K R K VSF+
Sbjct:  130 GHTRVRLRLPRSQITKLMEESHDASEVAAKIISAYMESSGGIQGGR-DNDGLRQRLGIAEINNHYKAREKHVSFA 203          
The following BLAST results are available for this feature:
BLAST of CD859500 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
B9GUU1_POPTR1.004e-846.74Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HW76_POPTR4.985e-847.73Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HJA1_POPTR1.450e-745.45Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q8LGT5_SOYBN5.512e-744.05Putative uncharacterized protein OS=Glycine max PE... [more]
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BLAST of CD859500 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G37840.11.832e-842.67| Symbols: | BEST Arabidopsis thaliana protein ma... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 46..50
score
NoneNo IPR availableSEGsegsegcoord: 3..16
score: NAcoord: 23..38
score
NoneNo IPR availableSEGsegsegcoord: 44..49
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CD859500 ID=CD859500; Name=CD859500; organism=Pisum sativum; type=EST; length=289bp
CACCGGGTTTGGGCTTAGATGGGCCCATGAGGGTCAAGATGAGGCTTCCT
AAAGCCCAGTTGGAGAAGTTGATGGAAGAGAGTAATGATAAGGCTGAGGT
GGCGGAGAAGATTATGAGTTTGTATATGGAAACGAGTGGTGGTGGTGGTG
GTGATGCGGTGGAGCATGACGGTGTCGTTTTGAGTCAAAATCGTAAGCCA
CGTGGGAAACGAGTGAGTTTTAGCCCAATGGAAATTGAAGAAAGTCACGT
AGCAGCAGCTTCTCAATAGCAAGTATTTTTTTTAATTAG
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