CD859500
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CD859500 vs. TrEMBL
Match: B9GUU1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_709990 PE=4 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 1.004e-8 Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 3 Query: 18 DGP--MRVKMRLPKAQLEKLMEESNDKAEVAEKIMSLYMETSXXXXXDAVEHDGVV--------LSQNRKPRGKRVSFSPMEIEESHVAAAS 263 DGP +RVK+RLPKAQ++KL+EES D+AEVAEKI+ LYM+ S + +H+ V ++++ K KRVSF P E E +A AS Sbjct: 126 DGPNTVRVKVRLPKAQVQKLVEESKDEAEVAEKIIDLYMDNSGEANGEH-DHNRHVQWQPELGSITESFKTTKKRVSFVPEE-GEIRLAVAS 215
BLAST of CD859500 vs. TrEMBL
Match: B9HW76_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_805134 PE=4 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 4.985e-8 Identity = 42/88 (47.73%), Postives = 51/88 (57.95%), Query Frame = 3 Query: 21 GPMRVKMRLPKAQLEKLMEESNDKAEVAEKIMSLYM-ETSXXXXXDAVEH-----DGVVLSQN-RKPRGKRVSFSPMEIEESHVAAAS 263 G MRVKMRLPKA++EKLM+ES D+ E A KI+ L M T+ H G V SQ K R KRVSF P+ E+ +A AS Sbjct: 127 GAMRVKMRLPKAEVEKLMQESKDETEAAAKIVDLCMANTAESALLQQQVHWKSAGHGRVSSQGIIKAREKRVSFLPVNEGETQIAVAS 214
BLAST of CD859500 vs. TrEMBL
Match: B9HJA1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_803598 PE=4 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.450e-7 Identity = 40/88 (45.45%), Postives = 46/88 (52.27%), Query Frame = 3 Query: 21 GPMRVKMRLPKAQLEKLMEESNDKAEVAEKIMSLYMET-------SXXXXXDAVEHDGVVLSQNRKPRGKRVSFSPMEIEESHVAAAS 263 G MRVKMRLPK Q+EKLM+ES D+AE A KI+ L M S + H V K R KRVSF P E +A AS Sbjct: 127 GAMRVKMRLPKEQVEKLMQESKDEAEAAAKILDLCMANTAGESGLSQQVHWKSGGHGRVGNQGIIKAREKRVSFLPFSEGEMQIAVAS 214
BLAST of CD859500 vs. TrEMBL
Match: Q8LGT5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 5.512e-7 Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 3 Query: 21 GPMRVKMRLPKAQLEKLMEESNDKAEVAEKIMSLYMETSXXXXXDAVEHDGVV---LSQNRKPRGKRVSFSPMEIEESHVAAAS 263 G +R+KMRLPKA++E+LM +AE AEKIM L M + +A DG V + ++ K R KRVSF P+ S +A AS Sbjct: 129 GGVRLKMRLPKAEVERLMRGCETEAEAAEKIMGLCM-ANNGGGVEARNGDGEVKGRVGESTKAREKRVSFMPINEGGSPIAVAS 211
BLAST of CD859500 vs. TAIR peptide
Match: AT5G37840.1 (| Symbols: | BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:15062192-15063327 REVERSE LENGTH=214) HSP 1 Score: 54.299 bits (129), Expect = 1.832e-8 Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 21 GPMRVKMRLPKAQLEKLMEESNDKAEVAEKIMSLYMETSXXXXXDAVEHDGV-------VLSQNRKPRGKRVSFS 224 G RV++RLP++Q+ KLMEES+D +EVA KI+S YME+S ++DG+ ++ + K R K VSF+ Sbjct: 130 GHTRVRLRLPRSQITKLMEESHDASEVAAKIISAYMESSGGIQGGR-DNDGLRQRLGIAEINNHYKAREKHVSFA 203 The following BLAST results are available for this feature:
BLAST of CD859500 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 4
BLAST of CD859500 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CD859500 ID=CD859500; Name=CD859500; organism=Pisum sativum; type=EST; length=289bpback to top |