AM161738

EST Overview


Name	AM161738
Unique Name	AM161738
Type	EST
Organism	Pisum sativum (pea)
Sequence length	409

Libraries


Library Name	Type
LIBEST_019360 Pisum sativum leaf vegetative	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of AM161738 vs. TrEMBL
Match: C6TK04_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.647e-27
Identity = 62/89 (69.66%), Postives = 67/89 (75.28%), Query Frame = -1

Query:    2 MASLLTTSIFTYSPVXXXXXXXXXXXXXXXRGCCVKAMKSEKSLEELYNVKVERKVSPEKLAQLEVSRWSVWKTGKSQLPWDWQVDQLV 268
            MASLLTTS  TYSP+                 CC+KAM  EKSLEELYNVKVERKVSPEKLA+L VS+WSVWKTGKS+LPWDWQVDQLV
Sbjct:    1 MASLLTTSAITYSPLNNGSKDFRKSGNSSKGRCCIKAMGIEKSLEELYNVKVERKVSPEKLAELGVSKWSVWKTGKSKLPWDWQVDQLV 89

[Close]

BLAST of AM161738 vs. TrEMBL
Match: B0BLJ6_LOTJA (CM0545.540.nc protein OS=Lotus japonicus GN=CM0545.540.nc PE=4 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.151e-27
Identity = 60/89 (67.42%), Postives = 66/89 (74.16%), Query Frame = -1

Query:    2 MASLLTTSIFTYSPVXXXXXXXXXXXXXXXRGCCVKAMKSEKSLEELYNVKVERKVSPEKLAQLEVSRWSVWKTGKSQLPWDWQVDQLV 268
            MASL+T S FTYSPV                GCC+KAMK EKSLEELYNVKVERKVSPE+LAQL +S+WS WKTGK +L WDWQVDQLV
Sbjct:    1 MASLITASAFTYSPVNGSRGFRKSGNSSRGGGCCIKAMKLEKSLEELYNVKVERKVSPERLAQLGISKWSAWKTGKCKLAWDWQVDQLV 89

[Close]

BLAST of AM161738 vs. TrEMBL
Match: C6T2P5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.297e-26
Identity = 59/89 (66.29%), Postives = 65/89 (73.03%), Query Frame = -1

Query:    2 MASLLTTSIFTYSPVXXXXXXXXXXXXXXXRGCCVKAMKSEKSLEELYNVKVERKVSPEKLAQLEVSRWSVWKTGKSQLPWDWQVDQLV 268
            MAS LTT   TYSPV                 CC+KAM+ EKSLEELYNVKVERKV PE+LA+L VS+WSVWKTGKS+LPWDWQVDQLV
Sbjct:    1 MASSLTTLAITYSPVNNGSRGFRKSVNASKGRCCIKAMRIEKSLEELYNVKVERKVPPERLAELGVSKWSVWKTGKSRLPWDWQVDQLV 89

[Close]

BLAST of AM161738 vs. TrEMBL
Match: B9SH45_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1116370 PE=4 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.156e-19
Identity = 44/55 (80.00%), Postives = 51/55 (92.73%), Query Frame = -1

Query:    2 VKAMKSEKSLEELYNVKVERKVSPEKLAQLEVSRWSVWKTGKSQLPWDWQVDQLV 166
            +KAM+ EKSLEELYNV+VERKV+PE+LA L VSRWS+WKTGK +LPWDWQVDQLV
Sbjct:   37 IKAMRVEKSLEELYNVRVERKVTPERLADLGVSRWSMWKTGKCKLPWDWQVDQLV 91

[Close]

BLAST of AM161738 vs. TrEMBL
Match: Q9SKY2_ARATH (Putative uncharacterized protein At2g32180 OS=Arabidopsis thaliana GN=At2g32180 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.635e-17
Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = -1

Query:    2 VKAMKSEKSLEELYNVKVERKVSPEKLAQLEVSRWSVWKTGKSQLPWDWQVDQLV 166
            V  M++EK LEELYNVKVERKVS ++L +L VSRWSVWKTGK +LPWDWQVDQLV
Sbjct:   31 VTCMQTEKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQLV 85

[Close]

BLAST of AM161738 vs. TrEMBL
Match: Q8LCZ1_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.635e-17
Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = -1

Query:    2 VKAMKSEKSLEELYNVKVERKVSPEKLAQLEVSRWSVWKTGKSQLPWDWQVDQLV 166
            V  M++EK LEELYNVKVERKVS ++L +L VSRWSVWKTGK +LPWDWQVDQLV
Sbjct:   31 VTCMQTEKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQLV 85

[Close]

BLAST of AM161738 vs. TrEMBL
Match: O48852_ARATH (At2g32650 OS=Arabidopsis thaliana GN=At2g32650 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.635e-17
Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = -1

Query:    2 VKAMKSEKSLEELYNVKVERKVSPEKLAQLEVSRWSVWKTGKSQLPWDWQVDQLV 166
            V  M++EK LEELYNVKVERKVS ++L +L VSRWSVWKTGK +LPWDWQVDQLV
Sbjct:   31 VTCMQTEKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQLV 85

[Close]

BLAST of AM161738 vs. TrEMBL
Match: D7LF10_ARALY (PTAC18 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_482190 PE=4 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.635e-17
Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = -1

Query:    2 VKAMKSEKSLEELYNVKVERKVSPEKLAQLEVSRWSVWKTGKSQLPWDWQVDQLV 166
            V  M++EK LEELYNVKVERKVS ++L +L VSRWSVWKTGK +LPWDWQVDQLV
Sbjct:   31 VTCMQTEKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQLV 85

[Close]

BLAST of AM161738 vs. TrEMBL
Match: D7TEC4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030485001 PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.001e-16
Identity = 39/52 (75.00%), Postives = 47/52 (90.38%), Query Frame = -1

Query:    2 MKSEKSLEELYNVKVERKVSPEKLAQLEVSRWSVWKTGKSQLPWDWQVDQLV 157
            M+ EK LEELYNV+VER+VSP++L +L VSRWS+WKTGKS+LPWDW VDQLV
Sbjct:   37 MRIEKPLEELYNVRVERQVSPKRLEELGVSRWSIWKTGKSRLPWDWHVDQLV 88

[Close]

BLAST of AM161738 vs. TrEMBL
Match: B9IAI8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_664772 PE=4 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.913e-16
Identity = 39/55 (70.91%), Postives = 47/55 (85.45%), Query Frame = -1

Query:    2 VKAMKSEKSLEELYNVKVERKVSPEKLAQLEVSRWSVWKTGKSQLPWDWQVDQLV 166
            +KAM  EK LEELYN++VERKVS ++LA+L VS+WS WKT K +LPWDWQVDQLV
Sbjct:   32 IKAMHIEKPLEELYNIRVERKVSRDRLAELGVSKWSAWKTDKCKLPWDWQVDQLV 86

[Close]

BLAST of AM161738 vs. TAIR peptide
Match: AT2G32650.2 (| Symbols: | RmlC-like cupins superfamily protein | chr2:13851547-13851966 FORWARD LENGTH=139)

HSP 1 Score: 91.6633 bits (226), Expect = 1.473e-19
Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = -1

Query:    2 VKAMKSEKSLEELYNVKVERKVSPEKLAQLEVSRWSVWKTGKSQLPWDWQVDQLV 166
            V  M++EK LEELYNVKVERKVS ++L +L VSRWSVWKTGK +LPWDWQVDQLV
Sbjct:   31 VTCMQTEKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQLV 85

[Close]

BLAST of AM161738 vs. TAIR peptide
Match: AT2G32180.1 (| Symbols: PTAC18 | plastid transcriptionally active 18 | chr2:13672362-13672781 REVERSE LENGTH=139)

HSP 1 Score: 91.6633 bits (226), Expect = 1.473e-19
Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = -1

Query:    2 VKAMKSEKSLEELYNVKVERKVSPEKLAQLEVSRWSVWKTGKSQLPWDWQVDQLV 166
            V  M++EK LEELYNVKVERKVS ++L +L VSRWSVWKTGK +LPWDWQVDQLV
Sbjct:   31 VTCMQTEKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQLV 85

[Close]

BLAST of AM161738 vs. TAIR peptide
Match: AT2G32650.1 (| Symbols: | RmlC-like cupins superfamily protein | chr2:13851547-13851966 FORWARD LENGTH=139)

HSP 1 Score: 91.6633 bits (226), Expect = 1.473e-19
Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = -1

Query:    2 VKAMKSEKSLEELYNVKVERKVSPEKLAQLEVSRWSVWKTGKSQLPWDWQVDQLV 166
            V  M++EK LEELYNVKVERKVS ++L +L VSRWSVWKTGK +LPWDWQVDQLV
Sbjct:   31 VTCMQTEKPLEELYNVKVERKVSQKRLEELGVSRWSVWKTGKCKLPWDWQVDQLV 85

The following BLAST results are available for this feature:

BLAST of AM161738 vs. TrEMBL
BLAST of AM161738 vs. TAIR peptide

BLAST of AM161738 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TK04_SOYBN	1.647e-27	69.66	Putative uncharacterized protein OS=Glycine max PE...	[more]
B0BLJ6_LOTJA	2.151e-27	67.42	CM0545.540.nc protein OS=Lotus japonicus GN=CM0545...	[more]
C6T2P5_SOYBN	5.297e-26	66.29	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9SH45_RICCO	2.156e-19	80.00	Putative uncharacterized protein OS=Ricinus commun...	[more]
Q9SKY2_ARATH	2.635e-17	76.36	Putative uncharacterized protein At2g32180 OS=Arab...	[more]
Q8LCZ1_ARATH	2.635e-17	76.36	Putative uncharacterized protein OS=Arabidopsis th...	[more]
O48852_ARATH	2.635e-17	76.36	At2g32650 OS=Arabidopsis thaliana GN=At2g32650 PE=...	[more]
D7LF10_ARALY	2.635e-17	76.36	PTAC18 OS=Arabidopsis lyrata subsp. lyrata GN=ARAL...	[more]
D7TEC4_VITVI	1.001e-16	75.00	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9IAI8_POPTR	2.913e-16	70.91	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of AM161738 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G32650.2	1.473e-19	76.36	\| Symbols: \| RmlC-like cupins superfamily protein...	[more]
AT2G32180.1	1.473e-19	76.36	\| Symbols: PTAC18 \| plastid transcriptionally acti...	[more]
AT2G32650.1	1.473e-19	76.36	\| Symbols: \| RmlC-like cupins superfamily protein...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 26..41 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>AM161738 ID=AM161738; Name=AM161738; organism=Pisum sativum; type=EST; length=409bp
ACACCAGTTGGTCTACCTGCCAATCCCATGGCAACTGGCTTTTTCCGGTC
TTCCATACTGACCATCTTGAAACTTCTAGCTGAGCTAGTTTTTCAGGTGA
AACTTTTCTTTCCACTTTGACATTGTATAATTCTTCCAAGGATTTCTCTG
ACTTCATTGCTTTTACGCAACACCCTCGTATAGAAGAGTTACTTGACTTT
CTATAACTCCTTGAACCATTGTTGACAGGAGAATATGTGAAGATTGATGT
TGTCAACAAGCTTGCCATGGCAGGTATCTTTTTATATTCAAAAGTGCTTC
ACTTTTTAAATATAATAAATCTTTTGAAAACAATAGGTGGAGATTTGTAG
TTGCAATGAGATGAGAGAGTTTTAGCTTCTTTCTACTGGTAAACGATAAA
CCCTTTCTG

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