EX569861

EST Overview
NameEX569861
Unique NameEX569861
TypeEST
OrganismPisum sativum (pea)
Sequence length479
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of EX569861 vs. TrEMBL
Match: B9GK15_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1070562 PE=4 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.468e-28
Identity = 65/119 (54.62%), Postives = 78/119 (65.55%), Query Frame = 3
Query:    3 RHLRMILKASRAGKEEPLEITWKHLAATDRVPPVSLIKERFCTKLEKDDYVVALKCITNNTPKDMQPFSKLSWLNLLKENSQRFHKDTLVRLMXXXXXXXXXXXXXXXXLVCLIQSCKE 359
            RHLRM+L ASRAGK E LEITWKHLA  DR+PP  L+KERFC  LEK+D+  AL CIT N+  + Q F K +WLNL +EN+QRF KDTL+RLM                L  L+ SC +
Sbjct:  510 RHLRMVLDASRAGKGEVLEITWKHLAQEDRIPPPPLVKERFCMMLEKEDFDSALACITTNSAGESQAFCKSAWLNLFEENAQRFRKDTLMRLMHEVRVLAAQSNSPNPVLQNLLISCSD 628          
BLAST of EX569861 vs. TrEMBL
Match: B9T6B9_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0237710 PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.984e-25
Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 3
Query:    3 RHLRMILKASRAGKEEPLEITWKHLAATDRVPPVSLIKERFCTKLEKDDYVVALKCITNNTPKDMQPFSKLSWLNLLKENSQRFHKDTLVRL 278
            RHLRMIL ASRAGK EPLE+TWKHLA  DR+PP +LIKERF   LEKDD   AL CIT N   +   F K++WLNL KEN+++  +DTL++L
Sbjct:  713 RHLRMILDASRAGKVEPLEMTWKHLARADRIPPPNLIKERFRIMLEKDDCKSALACITTNPMGESPAFHKVAWLNLFKENAEQIRRDTLIQL 804          
BLAST of EX569861 vs. TrEMBL
Match: A5BDB3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035448 PE=4 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.865e-24
Identity = 69/137 (50.36%), Postives = 82/137 (59.85%), Query Frame = 3
Query:    3 RHLRMILKASRAGKEEPLEITWKHLAATDRVPPVSLIKERFCTKLEKDDYVVALKCITNNTPKDMQ-PFSKLSWLNLLKENSQRFHKDTLVRLMXXXXXXXXXXXXXXXXLVCLIQSCKELCFDTHHNVAYMDSASN 410
            RHLR+IL ASRAGKEE LE TWK LA   RVPP  LIKERFC KLEK D   A+  IT +  K++Q PFSK +WLNL  EN+ RF  ++LV LM                L  L+ SCKE    TH  V+ + S S+
Sbjct:  882 RHLRIILDASRAGKEELLETTWKXLAGEGRVPP-PLIKERFCMKLEKGDCAAAVSSITGHXMKELQEPFSKRAWLNLFTENAGRFQTESLVELMHEASVLIARADMPNPVLQNLLASCKEF-LRTHMTVSSVSSXSS 1016          
BLAST of EX569861 vs. TrEMBL
Match: D7TKR1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021752001 PE=4 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.137e-23
Identity = 67/134 (50.00%), Postives = 79/134 (58.96%), Query Frame = 3
Query:    3 RHLRMILKASRAGKEEPLEITWKHLAATDRVPPVSLIKERFCTKLEKDDYVVALKCITNNTPKDMQ-PFSKLSWLNLLKENSQRFHKDTLVRLMXXXXXXXXXXXXXXXXLVCLIQSCKELCFDTHHNVAYMDS 401
            RHLR+IL ASRAGKEE LE TWK LA   RVPP  LIKERFC KLEK D   A+  IT +   ++Q PFSK +WLNL  EN+ RF  ++LV LM                L  L+ SCKE    TH  V+ + S
Sbjct:  420 RHLRIILDASRAGKEELLETTWKSLAGEGRVPP-PLIKERFCMKLEKGDCAAAVSSITGHHMNELQEPFSKRAWLNLFTENAGRFQTESLVELMHEASVRIARADMPNPVLQNLLASCKEF-LRTHMTVSSVSS 551          
BLAST of EX569861 vs. TrEMBL
Match: Q5QM38_ORYSJ (Pentatricopeptide (PPR) repeat-containing protein-like OS=Oryza sativa subsp. japonica GN=OJ1117_G01.3 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.398e-16
Identity = 44/119 (36.97%), Postives = 60/119 (50.42%), Query Frame = 3
Query:    3 RHLRMILKASRAGKEEPLEITWKHLAATDRVPPVSLIKERFCTKLEKDDYVVALKCITNNTPKDMQPFSKLSWLNLLKENSQRFHKDTLVRLMXXXXXXXXXXXXXXXXLVCLIQSCKE 359
            RHLRM+L A R GKE+ LE  W ++    RVPP  +I ERFC KL + D V A+ CI       ++  S +SW NLL  N  R  +D +++L+                   +I SC E
Sbjct:  848 RHLRMVLDAYRNGKEQLLEDVWDYMCQYGRVPPAPMIMERFCLKLRQGDTVAAMSCINTFQESKIRNVSSMSWFNLLNRNGDRLKEDIIIKLLHELNNLVSSSGHSDSLYQNIISSCTE 966          
BLAST of EX569861 vs. TrEMBL
Match: B9EYK3_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_02981 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.398e-16
Identity = 44/119 (36.97%), Postives = 60/119 (50.42%), Query Frame = 3
Query:    3 RHLRMILKASRAGKEEPLEITWKHLAATDRVPPVSLIKERFCTKLEKDDYVVALKCITNNTPKDMQPFSKLSWLNLLKENSQRFHKDTLVRLMXXXXXXXXXXXXXXXXLVCLIQSCKE 359
            RHLRM+L A R GKE+ LE  W ++    RVPP  +I ERFC KL + D V A+ CI       ++  S +SW NLL  N  R  +D +++L+                   +I SC E
Sbjct:  854 RHLRMVLDAYRNGKEQLLEDVWDYMCQYGRVPPAPMIMERFCLKLRQGDTVAAMSCINTFQESKIRNVSSMSWFNLLNRNGDRLKEDIIIKLLHELNNLVSSSGHSDSLYQNIISSCTE 972          
BLAST of EX569861 vs. TrEMBL
Match: D7KFM0_ARALY (EMB2279 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_890614 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.425e-15
Identity = 43/97 (44.33%), Postives = 66/97 (68.04%), Query Frame = 3
Query:    3 RHLRMILKASRAGKEEPLEITWKHLAATDRVPPVSLIKERFCTKLEKDDYVVALKCITNNTPK----DMQPFSKLSWLNLLKENSQRFHKDTLVRLM 281
            RHLRM+L+ASRAGKEE +E TW+H+  ++R+PP  LIKERF  KLEK D++ A+  + +   K    +++ FS  +W  +L +    F +D+++RLM
Sbjct:  783 RHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLEKGDHISAISSLADLDGKIEETELRAFSTSAWSRVLSQ----FEQDSVLRLM 875          
BLAST of EX569861 vs. TrEMBL
Match: B8A7A0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03237 PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.431e-15
Identity = 43/119 (36.13%), Postives = 59/119 (49.58%), Query Frame = 3
Query:    3 RHLRMILKASRAGKEEPLEITWKHLAATDRVPPVSLIKERFCTKLEKDDYVVALKCITNNTPKDMQPFSKLSWLNLLKENSQRFHKDTLVRLMXXXXXXXXXXXXXXXXLVCLIQSCKE 359
            RHL M+L A R GKE+ LE  W ++    RVPP  +I ERFC KL + D V A+ CI       ++  S +SW NLL  N  R  +D +++L+                   +I SC E
Sbjct:  854 RHLHMVLDAYRNGKEQLLEDVWDYMCQYGRVPPAPMIMERFCLKLRQGDTVAAMSCINTFQESKIRNVSSMSWFNLLNRNGDRLKEDIIIKLLHELNNLVSSSGHSDSLYQNIISSCTE 972          
BLAST of EX569861 vs. TrEMBL
Match: C5XG40_SORBI (Putative uncharacterized protein Sb03g030920 OS=Sorghum bicolor GN=Sb03g030920 PE=4 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.621e-13
Identity = 37/92 (40.22%), Postives = 55/92 (59.78%), Query Frame = 3
Query:    3 RHLRMILKASRAGKEEPLEITWKHLAATDRVPPVSLIKERFCTKLEKDDYVVALKCITNNTPKDMQPFSKLSWLNLLKENSQRFHKDTLVRL 278
            RHLRM+L A R GK++ L+  W +L    RVPP  +I ERFC KL + D + A+ C+++     +   S  SWLNLL  N+ R  ++ + +L
Sbjct:  802 RHLRMVLDAYRHGKDQLLDDLWHYLCHHSRVPPTPVIMERFCLKLMQGDTLAAISCVSSFKEGKICNISSTSWLNLLNRNTARLKEEHVTKL 893          
BLAST of EX569861 vs. SwissProt
Match: PPR64_ARATH (Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana GN=EMB2279 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.556e-17
Identity = 50/133 (37.59%), Postives = 77/133 (57.89%), Query Frame = 3
Query:    3 RHLRMILKASRAGKEEPLEITWKHLAATDRVPPVSLIKERFCTKLEKDDYVVALKCITNNTPK----DMQPFSKLSWLNLLKENSQRFHKDTLVRLMXXXXXXXXXXXXXXXXLV-CLIQSCKELCFDTHHNV 386
            RHLRM+L+ASRAGKEE +E TW+H+  ++R+PP  LIKERF  KLEK D++ A+  + +   K    +++ FS  +W  +L     RF +D+++RLM                ++  L+ SCK+      HN+
Sbjct:  878 RHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLEKGDHISAISSLADLNGKIEETELRAFSTSAWSRVL----SRFEQDSVLRLMDDVNRRLGSRSESSDSVLGNLLSSCKDYLKTRTHNL 1006          
BLAST of EX569861 vs. TAIR peptide
Match: AT1G30610.2 (| Symbols: EMB2279 | pentatricopeptide (PPR) repeat-containing protein | chr1:10846676-10850517 FORWARD LENGTH=978)

HSP 1 Score: 88.5817 bits (218), Expect = 1.804e-18
Identity = 50/133 (37.59%), Postives = 77/133 (57.89%), Query Frame = 3
Query:    3 RHLRMILKASRAGKEEPLEITWKHLAATDRVPPVSLIKERFCTKLEKDDYVVALKCITNNTPK----DMQPFSKLSWLNLLKENSQRFHKDTLVRLMXXXXXXXXXXXXXXXXLV-CLIQSCKELCFDTHHNV 386
            RHLRM+L+ASRAGKEE +E TW+H+  ++R+PP  LIKERF  KLEK D++ A+  + +   K    +++ FS  +W  +L     RF +D+++RLM                ++  L+ SCK+      HN+
Sbjct:  850 RHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLEKGDHISAISSLADLNGKIEETELRAFSTSAWSRVL----SRFEQDSVLRLMDDVNRRLGSRSESSDSVLGNLLSSCKDYLKTRTHNL 978          
BLAST of EX569861 vs. TAIR peptide
Match: AT1G30610.1 (| Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) repeat-containing protein | chr1:10846676-10850517 FORWARD LENGTH=1006)

HSP 1 Score: 88.5817 bits (218), Expect = 1.804e-18
Identity = 50/133 (37.59%), Postives = 77/133 (57.89%), Query Frame = 3
Query:    3 RHLRMILKASRAGKEEPLEITWKHLAATDRVPPVSLIKERFCTKLEKDDYVVALKCITNNTPK----DMQPFSKLSWLNLLKENSQRFHKDTLVRLMXXXXXXXXXXXXXXXXLV-CLIQSCKELCFDTHHNV 386
            RHLRM+L+ASRAGKEE +E TW+H+  ++R+PP  LIKERF  KLEK D++ A+  + +   K    +++ FS  +W  +L     RF +D+++RLM                ++  L+ SCK+      HN+
Sbjct:  878 RHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLEKGDHISAISSLADLNGKIEETELRAFSTSAWSRVL----SRFEQDSVLRLMDDVNRRLGSRSESSDSVLGNLLSSCKDYLKTRTHNL 1006          
The following BLAST results are available for this feature:
BLAST of EX569861 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 9
Match NameE-valueIdentityDescription
B9GK15_POPTR1.468e-2854.62Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9T6B9_RICCO1.984e-2561.96Pentatricopeptide repeat-containing protein, putat... [more]
A5BDB3_VITVI2.865e-2450.36Putative uncharacterized protein OS=Vitis vinifera... [more]
D7TKR1_VITVI4.137e-2350.00Whole genome shotgun sequence of line PN40024, sca... [more]
Q5QM38_ORYSJ6.398e-1636.97Pentatricopeptide (PPR) repeat-containing protein-... [more]
B9EYK3_ORYSJ6.398e-1636.97Putative uncharacterized protein OS=Oryza sativa s... [more]
D7KFM0_ARALY1.425e-1544.33EMB2279 OS=Arabidopsis lyrata subsp. lyrata GN=ARA... [more]
B8A7A0_ORYSI2.431e-1536.13Putative uncharacterized protein OS=Oryza sativa s... [more]
C5XG40_SORBI6.621e-1340.22Putative uncharacterized protein Sb03g030920 OS=So... [more]
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BLAST of EX569861 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
PPR64_ARATH1.556e-1737.59Pentatricopeptide repeat-containing protein At1g30... [more]
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BLAST of EX569861 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G30610.21.804e-1837.59| Symbols: EMB2279 | pentatricopeptide (PPR) repea... [more]
AT1G30610.11.804e-1837.59| Symbols: EMB88, EMB2279 | pentatricopeptide (PPR... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 94..109
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX569861 ID=EX569861; Name=EX569861; organism=Pisum sativum; type=EST; length=479bp
AACGGCATCTTCGTATGATACTGAAGGCTTCAAGAGCTGGAAAGGAAGAG
CCATTAGAGATAACATGGAAGCACTTGGCTGCTACAGATAGAGTTCCACC
AGTTTCTCTAATCAAGGAGAGGTTTTGTACAAAGCTCGAGAAGGATGATT
ATGTTGTTGCTCTTAAATGCATCACCAATAACACACCAAAAGACATGCAA
CCATTTTCGAAGTTGTCATGGTTGAATCTATTGAAAGAAAATTCTCAACG
CTTTCATAAGGATACACTTGTTAGACTAATGAATGCAGCTAGCAATGTAA
TTTCCAACAATAGCGTGCCTAATCCAGCGCTTGTGTGCTTAATTCAATCA
TGCAAAGAATTATGTTTTGACACTCATCACAATGTAGCTTACATGGATTC
AGCAAGCAATGTATTTGTATTAGAAAACAAACGGGGAGTAACCAACACTA
GGTGAACATTTGTATCCTAAATTTTGTAA
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