FG528796

EST Overview
NameFG528796
Unique NameFG528796
TypeEST
OrganismPisum sativum (pea)
Sequence length491
Libraries
Library NameType
LIBEST_023214 MeriC Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG528796 vs. TrEMBL
Match: C6T2J1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.622e-22
Identity = 51/78 (65.38%), Postives = 64/78 (82.05%), Query Frame = 3
Query:  141 FLRKVVEQGNFQRHVVGLVKMLAKKRKLGIVAEVLEEFERIYDELCGTQVVLISSKREIGKDQMFGIAKTVQKQSGAI 374
            F    VEQGNF RHVV L+KML KK K+G+V EVL+EFERIYD LCGTQ+VL+SSK ++ +DQ+FGIAK+V + SGA+
Sbjct:  124 FQSPAVEQGNFHRHVVALLKMLLKKNKVGVVKEVLQEFERIYDRLCGTQMVLVSSKTKMREDQLFGIAKSVHQLSGAV 201          
BLAST of FG528796 vs. TrEMBL
Match: B9I915_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572432 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.547e-14
Identity = 40/77 (51.95%), Postives = 60/77 (77.92%), Query Frame = 3
Query:  144 LRKVVEQGNFQRHVVGLVKMLAKKRKLGIVAEVLEEFERIYDELCGTQVVLISSKREIGKDQMFGIAKTVQKQSGAI 374
            +++V ++G F R++VGLVKML  + K+ IV++VL EFE I DEL GT+VVL+ S +++ +DQ+F IAKTVQ  +GA+
Sbjct:  182 VKEVAKRGKFNRYLVGLVKMLIDRNKVMIVSDVLMEFESICDELSGTRVVLVPSPKKMEEDQLFWIAKTVQNLTGAM 258          
BLAST of FG528796 vs. TrEMBL
Match: B9SBC4_RICCO (ATP synthase OS=Ricinus communis GN=RCOM_0715620 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.690e-13
Identity = 39/77 (50.65%), Postives = 60/77 (77.92%), Query Frame = 3
Query:  144 LRKVVEQGNFQRHVVGLVKMLAKKRKLGIVAEVLEEFERIYDELCGTQVVLISSKREIGKDQMFGIAKTVQKQSGAI 374
            L++V ++G F   +V L+ ML ++ K+ IV EVL EF+RI+DEL GT+VVL+SSK+++ +D +F IA++VQK SGA+
Sbjct:  134 LKEVGKKGKFNSILVRLLTMLIERNKIMIVNEVLVEFQRIFDELSGTKVVLVSSKKKMEEDALFRIAQSVQKFSGAV 210          
BLAST of FG528796 vs. TrEMBL
Match: D5A7U9_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.480e-8
Identity = 27/76 (35.53%), Postives = 47/76 (61.84%), Query Frame = 3
Query:  144 LRKVVEQGNFQRHVVGLVKMLAKKRKLGIVAEVLEEFERIYDELCGTQVVLISSKREIGKDQMFGIAKTVQKQSGA 371
            L+ + +   FQ + +  + +L  K+K+GIV  +L+EFE +Y+EL  TQV  +SS  ++   ++  IAK +Q  +GA
Sbjct:  150 LKSIADDAKFQTYTLNFLNLLISKQKIGIVNNILKEFESLYNELTDTQVAFVSSALKLENRELAQIAKKIQSLTGA 225          
BLAST of FG528796 vs. SwissProt
Match: ATPD_SPIOL (ATP synthase delta chain, chloroplastic OS=Spinacia oleracea GN=ATPD PE=1 SV=2)

HSP 1 Score: 53.5286 bits (127), Expect = 5.982e-7
Identity = 23/76 (30.26%), Postives = 45/76 (59.21%), Query Frame = 3
Query:  144 LRKVVEQGNFQRHVVGLVKMLAKKRKLGIVAEVLEEFERIYDELCGTQVVLISSKREIGKDQMFGIAKTVQKQSGA 371
            L +++     Q H    + +L    ++ +V E+L EFE +++++ GT+V +++S  ++  D +  IAK VQK +GA
Sbjct:  129 LDEIITTSGLQPHTANFINILIDSERINLVKEILNEFEDVFNKITGTEVAVVTSVVKLENDHLAQIAKGVQKITGA 204          
BLAST of FG528796 vs. SwissProt
Match: ATPD_CHLRE (ATP synthase delta chain, chloroplastic OS=Chlamydomonas reinhardtii GN=ATPD PE=1 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 7.813e-7
Identity = 24/76 (31.58%), Postives = 48/76 (63.16%), Query Frame = 3
Query:  144 LRKVVEQGNFQRHVVGLVKMLAKKRKLGIVAEVLEEFERIYDELCGTQVVLISSKREIGKDQMFGIAKTVQKQSGA 371
            L K+ ++  FQ++ +  + +L +K +L +V E+ E FE +Y ++  TQV  + S  ++ ++Q F IAK +Q+ +G+
Sbjct:   94 LAKIAKEAGFQQYTINWLNLLVEKDRLSLVPEICECFEDLYCQMTDTQVATLRSAVKLEQEQQFLIAKKLQELTGS 169          
BLAST of FG528796 vs. TAIR peptide
Match: AT4G00895.1 (| Symbols: | ATPase, F1 complex, OSCP/delta subunit protein | chr4:381823-382398 FORWARD LENGTH=191)

HSP 1 Score: 51.2174 bits (121), Expect = 3.325e-7
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 3
Query:  153 VVEQGNFQRHVVGLVKMLAKKRKLGIVAEVLEEFERIYDELCGTQVVLIS 302
            VVE+G F +H  GLVKML  + K GI+ +VL EFERI +EL   ++V +S
Sbjct:  142 VVERGKFGKHFKGLVKMLIARGKSGILVDVLMEFERICNELVSKKLVWVS 191          
BLAST of FG528796 vs. TAIR peptide
Match: AT4G09650.1 (| Symbols: ATPD | ATP synthase delta-subunit gene | chr4:6100799-6101503 FORWARD LENGTH=234)

HSP 1 Score: 50.447 bits (119), Expect = 5.672e-7
Identity = 24/73 (32.88%), Postives = 43/73 (58.90%), Query Frame = 3
Query:  153 VVEQGNFQRHVVGLVKMLAKKRKLGIVAEVLEEFERIYDELCGTQVVLISSKREIGKDQMFGIAKTVQKQSGA 371
            +V+  + Q H    + +L    ++ IV E+++EFE +Y++L  TQ+  + S  ++   Q+  IAK VQK +GA
Sbjct:  109 IVKSSSLQSHTSNFLNVLVDANRINIVTEIVKEFELVYNKLTDTQLAEVRSVVKLEAPQLAQIAKQVQKLTGA 181          
The following BLAST results are available for this feature:
BLAST of FG528796 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
C6T2J1_SOYBN4.622e-2265.38Putative uncharacterized protein OS=Glycine max PE... [more]
B9I915_POPTR3.547e-1451.95Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SBC4_RICCO6.690e-1350.65ATP synthase OS=Ricinus communis GN=RCOM_0715620 P... [more]
D5A7U9_PICSI6.480e-835.53Putative uncharacterized protein OS=Picea sitchens... [more]
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BLAST of FG528796 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
ATPD_SPIOL5.982e-730.26ATP synthase delta chain, chloroplastic OS=Spinaci... [more]
ATPD_CHLRE7.813e-731.58ATP synthase delta chain, chloroplastic OS=Chlamyd... [more]
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BLAST of FG528796 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G00895.13.325e-752.00| Symbols: | ATPase, F1 complex, OSCP/delta subun... [more]
AT4G09650.15.672e-732.88| Symbols: ATPD | ATP synthase delta-subunit gene ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 32..45
score
IPR000711ATPase, F1 complex, OSCP/delta subunitGENE3D1.10.520.20no descriptioncoord: 4..48
score: 0.0
IPR000711ATPase, F1 complex, OSCP/delta subunitPANTHERPTHR11910ATP SYNTHASE DELTA CHAINcoord: 3..86
score: 7.5
IPR000711ATPase, F1 complex, OSCP/delta subunitPFAMPF00213OSCPcoord: 3..87
score: 4.8

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG528796 ID=FG528796; Name=FG528796; organism=Pisum sativum; type=EST; length=491bp
CATGTGGTTGGGTTGGTGAAGATGTTGGCTAAGAAGAGGAAATTGGGAAT
AGTTGCGGAAGTGTTGGAAGAGTTCGATAGCGGTATTGATGCTTCCTCAC
CGCCGAAGCATCAATACCGCTATCCGACTGAAGCTTCGATTTCCTGAGGA
AGGTGGTGGAGCAGGGGAATTTTCAGCGGCATGTGGTTGGGTTGGTGAAG
ATGTTGGCTAAGAAGAGGAAATTGGGAATAGTTGCGGAAGTGTTGGAAGA
GTTCGAGAGGATTTACGATGAATTGTGTGGAACTCAAGTTGTGTTGATTT
CATCAAAAAGAGAAATTGGAAAAGATCAAATGTTTGGGATTGCGAAAACA
GTGCAGAAACAAAGTGGAGCAATTAGGGTTAGAGTTAGGAATTTTGTTCA
AAATTAGAACAATTTCTATCAGTAGAAAATGTAATGCAATTTTCTGTATA
AACTAATTTGCGATTAGTAGAAGAGTATTTTTCCTCTTTTT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0015986proton motive force-driven ATP synthesis
Vocabulary: INTERPRO
TermDefinition
IPR000711ATPase_OSCP/dsu