FG534172

EST Overview


Name	FG534172
Unique Name	FG534172
Type	EST
Organism	Pisum sativum (pea)
Sequence length	669

Libraries


Library Name	Type
LIBEST_023216 MeriT Pisum sativum Shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of FG534172 vs. TrEMBL
Match: B7FH58_MEDTR (Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.734e-18
Identity = 76/201 (37.81%), Postives = 85/201 (42.29%), Query Frame = 1

Query:    1 RSGKSVELWXXXXXXXXXXXXXXXXXV-------EIKEGEKNSTEPVGESSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKSEGGAXXXXXXXXXXXSGSVTSVPLNNNDGGEKVILSTEKV----------ATPKEIIVPPVLEQXXXXXXXXXXXXXXXXXXLAHAPP----PYGLSYNTSYPVSTTSAYYVGA 540
            RSGKSVELW                         EIKE +KNSTE +GESSH                                NKSEGGA           SGS +  P   N+GG K I+STE +          A PKEII+PPVL Q                    H PP    PYGLSYNTSYPVS+TS+YYVGA
Sbjct:   78 RSGKSVELWPEKPPEKKDKKSSKSKGETENIINKEIKEDQKNSTEHIGESSHEGCIDDAGDDGEEDSDHKEGNNGDKNN-----NKSEGGAKKKKKKKKKNKSGSASLTP---NNGGGKEIISTETIDSPQVLEKVNAIPKEIIMPPVLPQQHAYNPYPPHMYYP------HPPPAVAPPYGLSYNTSYPVSSTSSYYVGA 264

[Close]

BLAST of FG534172 vs. TrEMBL
Match: C6TL38_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.342e-17
Identity = 60/138 (43.48%), Postives = 79/138 (57.25%), Query Frame = 1

Query:  286 SGSVTSVPLNNNDGGEKV-----ILSTEKVATPKEIIVPPVLEQXXXXXXXXXXXXXXXXXXLAHAPPP-YGLSYNTSYPVSTTSAYYVGAPIMPMHA---NYSRLXXXXXXXSDPINNYGYHNDHEEYE-SGYCSIM 669
            SGS  S P N   GGE++     ++ +     PK++I PP+                     + ++PPP YGLSYNT+YPVS++++YYVGAPIMPMHA   +YSRL       SDPI +YG   D +EYE  GYCSIM
Sbjct:  173 SGSA-SAPPNKGGGGEEISKVDALVPSSNFLAPKDLISPPIQHAYPYPPH------------VYYSPPPAYGLSYNTAYPVSSSASYYVGAPIMPMHAYTTSYSRL-PPPPPPSDPIKHYG--EDEDEYEGGGYCSIM 294

The following BLAST results are available for this feature:

BLAST of FG534172 vs. TrEMBL

BLAST of FG534172 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2


Match Name	E-value	Identity	Description
B7FH58_MEDTR	6.734e-18	37.81	Putative uncharacterized protein (Fragment) OS=Med...	[more]
C6TL38_SOYBN	3.342e-17	43.48	Putative uncharacterized protein OS=Glycine max PE...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 10..26 score: NAcoord: 46..77 score: NAcoord: 85..95 score: NAcoord: 135..152 score: NAcoord: 193..199 score
None	No IPR available	SEG	seg	seg	coord: 7..22 score: NAcoord: 25..50 score
None	No IPR available	SEG	seg	seg	coord: 5..38 score
None	No IPR available	SEG	seg	seg	coord: 52..83 score
None	No IPR available	SEG	seg	seg	coord: 3..43 score
None	No IPR available	SEG	seg	seg	coord: 39..70 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG534172 ID=FG534172; Name=FG534172; organism=Pisum sativum; type=EST; length=669bp
CGATCAGGAAAATCAGTGGAACTTTGGCCACAAAAACCACCTGAGAAGAA
AGATAAAAAACCTTCAACAAAATCAAAGGTAGAGATCAAGGAAGGTGAAA
AGAATAGTACTGAACCAGTTGGAGAAAGTAGTCATGAAGATTGTATAGAT
GATGTAGGTGATGATGGTGATGGTGGTGAAGAAGATTCAAATCATAATGA
TGATGATGGTTGTGGTGGTGGTGGTGGTGATAATAAAAGTGAAGGGGGTG
CTAAAAAGAAGAAGAAAAAGAAAAAGAAGAATAAAAGTGGTTCTGTAACT
TCTGTTCCTCTTAATAATAATGATGGAGGAGAAAAAGTGATTCTTAGTAC
AGAAAAAGTTGCTACTCCCAAGGAAATTATTGTCCCTCCAGTACTTGAAC
AACATCATGGCTATAATAACCCATATCCACCACATATGTACTATTCACAC
CCTCCTCTTGCTCATGCACCACCACCTTATGGGTTAAGCTATAACACATC
CTATCCTGTTTCAACTACTTCTGCTTATTATGTTGGGGCACCTATCATGC
CTATGCATGCTAATTACTCTAGACTTCCTCCACCTCCTCCTCCACCGTCT
GATCCAATCAATAATTATGGTTATCATAATGATCATGAGGAATATGAAAG
TGGATATTGCTCCATTATG

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