FG539012
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EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG539012 vs. TrEMBL
Match: D7SL92_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025317001 PE=4 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.610e-14 Identity = 44/115 (38.26%), Postives = 54/115 (46.96%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
G+LDI+NF+VTHIHCPPPAW+N S +S D +R+PSWL T S IY GS + G+H+LDFYP SSPCH
Sbjct: 397 GVLDIHNFQVTHIHCPPPAWLNGSNSSADVSYVRKPSWLPTYS----------------------------------------------IYAVGSSSDNGIHLLDFYPDSSSPCH 465
BLAST of FG539012 vs. TrEMBL
Match: B9GM92_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_178704 PE=4 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.341e-13 Identity = 44/115 (38.26%), Postives = 55/115 (47.83%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
GILDI NF+VTH+HCPPPAW+N S+ D + LR+PSWL+T S IY+ GS + G+H+LDFYP SSPCH
Sbjct: 305 GILDIYNFQVTHVHCPPPAWLNGSFT--DLLSLRKPSWLATHS----------------------------------------------IYVVGSSTDNGIHLLDFYPDPSSPCH 371
BLAST of FG539012 vs. TrEMBL
Match: B9RI85_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1577200 PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.752e-13 Identity = 44/115 (38.26%), Postives = 52/115 (45.22%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
G+LDI N +VTH+HCPPPAW+NDS S D + LR+PSWL T S IY GS G+H+LDFYP SSPCH
Sbjct: 342 GVLDIYNCQVTHVHCPPPAWLNDSNISADLLYLRKPSWLPTYS----------------------------------------------IYAVGSSSANGIHLLDFYPDPSSPCH 410
BLAST of FG539012 vs. TrEMBL
Match: Q9LXU7_ARATH (Putative uncharacterized protein T24H18_100 OS=Arabidopsis thaliana GN=T24H18_100 PE=4 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.813e-10 Identity = 40/115 (34.78%), Postives = 53/115 (46.09%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
G+LDI +VTH+HCPPPAW++ S +S D + LR+PSWL T S IY+ GS +G+H+LDF+PS SPCH
Sbjct: 306 GVLDIYKSEVTHVHCPPPAWLDGSNSSAD-LILRKPSWLPTSS----------------------------------------------IYVVGSMSEKGIHVLDFHPSSRSPCH 373
BLAST of FG539012 vs. TrEMBL
Match: Q5PP27_ARATH (At5g12920 OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.813e-10 Identity = 40/115 (34.78%), Postives = 53/115 (46.09%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
G+LDI +VTH+HCPPPAW++ S +S D + LR+PSWL T S IY+ GS +G+H+LDF+PS SPCH
Sbjct: 271 GVLDIYKSEVTHVHCPPPAWLDGSNSSAD-LILRKPSWLPTSS----------------------------------------------IYVVGSMSEKGIHVLDFHPSSRSPCH 338
BLAST of FG539012 vs. TrEMBL
Match: C0P9C8_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 8.420e-8 Identity = 36/115 (31.30%), Postives = 48/115 (41.74%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
G+L++NN VTH+HCPPPAW+ + L Q LR+P+WL T S IY GS G+++LDF+P SS CH
Sbjct: 344 GVLNVNNLNVTHLHCPPPAWLEGTDLVL-QKQLRKPTWLLTSS----------------------------------------------IYAVGSSSYDGIYLLDFHPDTSSACH 411
BLAST of FG539012 vs. TAIR peptide
Match: AT5G12920.3 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:4077917-4082585 REVERSE LENGTH=554) HSP 1 Score: 68.9366 bits (167), Expect = 7.018e-13 Identity = 40/115 (34.78%), Postives = 53/115 (46.09%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
G+LDI +VTH+HCPPPAW++ S +S D + LR+PSWL T S IY+ GS +G+H+LDF+PS SPCH
Sbjct: 418 GVLDIYKSEVTHVHCPPPAWLDGSNSSAD-LILRKPSWLPTSS----------------------------------------------IYVVGSMSEKGIHVLDFHPSSRSPCH 485
BLAST of FG539012 vs. TAIR peptide
Match: AT5G12920.2 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:4077917-4082585 REVERSE LENGTH=572) HSP 1 Score: 68.9366 bits (167), Expect = 7.018e-13 Identity = 40/115 (34.78%), Postives = 53/115 (46.09%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
G+LDI +VTH+HCPPPAW++ S +S D + LR+PSWL T S IY+ GS +G+H+LDF+PS SPCH
Sbjct: 436 GVLDIYKSEVTHVHCPPPAWLDGSNSSAD-LILRKPSWLPTSS----------------------------------------------IYVVGSMSEKGIHVLDFHPSSRSPCH 503
BLAST of FG539012 vs. TAIR peptide
Match: AT5G12920.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:4077917-4082585 REVERSE LENGTH=537) HSP 1 Score: 68.9366 bits (167), Expect = 7.018e-13 Identity = 40/115 (34.78%), Postives = 53/115 (46.09%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
G+LDI +VTH+HCPPPAW++ S +S D + LR+PSWL T S IY+ GS +G+H+LDF+PS SPCH
Sbjct: 401 GVLDIYKSEVTHVHCPPPAWLDGSNSSAD-LILRKPSWLPTSS----------------------------------------------IYVVGSMSEKGIHVLDFHPSSRSPCH 468
BLAST of FG539012 vs. TAIR peptide
Match: AT5G12920.3 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:4077917-4082585 REVERSE LENGTH=554) HSP 1 Score: 68.9366 bits (167), Expect = 7.018e-13 Identity = 40/115 (34.78%), Postives = 53/115 (46.09%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
G+LDI +VTH+HCPPPAW++ S +S D + LR+PSWL T S IY+ GS +G+H+LDF+PS SPCH
Sbjct: 418 GVLDIYKSEVTHVHCPPPAWLDGSNSSAD-LILRKPSWLPTSS----------------------------------------------IYVVGSMSEKGIHVLDFHPSSRSPCH 485
BLAST of FG539012 vs. TAIR peptide
Match: AT5G12920.2 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:4077917-4082585 REVERSE LENGTH=572) HSP 1 Score: 68.9366 bits (167), Expect = 7.018e-13 Identity = 40/115 (34.78%), Postives = 53/115 (46.09%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
G+LDI +VTH+HCPPPAW++ S +S D + LR+PSWL T S IY+ GS +G+H+LDF+PS SPCH
Sbjct: 436 GVLDIYKSEVTHVHCPPPAWLDGSNSSAD-LILRKPSWLPTSS----------------------------------------------IYVVGSMSEKGIHVLDFHPSSRSPCH 503
BLAST of FG539012 vs. TAIR peptide
Match: AT5G12920.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:4077917-4082585 REVERSE LENGTH=537) HSP 1 Score: 68.9366 bits (167), Expect = 7.018e-13 Identity = 40/115 (34.78%), Postives = 53/115 (46.09%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
G+LDI +VTH+HCPPPAW++ S +S D + LR+PSWL T S IY+ GS +G+H+LDF+PS SPCH
Sbjct: 401 GVLDIYKSEVTHVHCPPPAWLDGSNSSAD-LILRKPSWLPTSS----------------------------------------------IYVVGSMSEKGIHVLDFHPSSRSPCH 468
BLAST of FG539012 vs. TrEMBL
Match: D7SL92_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025317001 PE=4 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.764e-14 Identity = 44/115 (38.26%), Postives = 54/115 (46.96%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
G+LDI+NF+VTHIHCPPPAW+N S +S D +R+PSWL T S IY GS + G+H+LDFYP SSPCH
Sbjct: 397 GVLDIHNFQVTHIHCPPPAWLNGSNSSADVSYVRKPSWLPTYS----------------------------------------------IYAVGSSSDNGIHLLDFYPDSSSPCH 465
BLAST of FG539012 vs. TrEMBL
Match: B9GM92_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_178704 PE=4 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.677e-13 Identity = 44/115 (38.26%), Postives = 55/115 (47.83%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
GILDI NF+VTH+HCPPPAW+N S+ D + LR+PSWL+T S IY+ GS + G+H+LDFYP SSPCH
Sbjct: 305 GILDIYNFQVTHVHCPPPAWLNGSFT--DLLSLRKPSWLATHS----------------------------------------------IYVVGSSTDNGIHLLDFYPDPSSPCH 371
BLAST of FG539012 vs. TrEMBL
Match: B9RI85_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1577200 PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.190e-13 Identity = 44/115 (38.26%), Postives = 52/115 (45.22%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
G+LDI N +VTH+HCPPPAW+NDS S D + LR+PSWL T S IY GS G+H+LDFYP SSPCH
Sbjct: 342 GVLDIYNCQVTHVHCPPPAWLNDSNISADLLYLRKPSWLPTYS----------------------------------------------IYAVGSSSANGIHLLDFYPDPSSPCH 410
BLAST of FG539012 vs. TrEMBL
Match: Q9LXU7_ARATH (Putative uncharacterized protein T24H18_100 OS=Arabidopsis thaliana GN=T24H18_100 PE=4 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.267e-10 Identity = 40/115 (34.78%), Postives = 53/115 (46.09%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
G+LDI +VTH+HCPPPAW++ S +S D + LR+PSWL T S IY+ GS +G+H+LDF+PS SPCH
Sbjct: 306 GVLDIYKSEVTHVHCPPPAWLDGSNSSAD-LILRKPSWLPTSS----------------------------------------------IYVVGSMSEKGIHVLDFHPSSRSPCH 373
BLAST of FG539012 vs. TrEMBL
Match: Q5PP27_ARATH (At5g12920 OS=Arabidopsis thaliana GN=At5g12920 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.267e-10 Identity = 40/115 (34.78%), Postives = 53/115 (46.09%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
G+LDI +VTH+HCPPPAW++ S +S D + LR+PSWL T S IY+ GS +G+H+LDF+PS SPCH
Sbjct: 271 GVLDIYKSEVTHVHCPPPAWLDGSNSSAD-LILRKPSWLPTSS----------------------------------------------IYVVGSMSEKGIHVLDFHPSSRSPCH 338
BLAST of FG539012 vs. Medicago proteins
Match: IMGA|Medtr1g105170.1 (Unknown Protein (AHRD V1); contains Interpro domain(s) IPR017986 WD40 repeat, region chr01_pseudomolecule_IMGAG_V3.5 31037392-31045574 E EGN_Mt100125 20100825) HSP 1 Score: 116.701 bits (291), Expect = 2.851e-27 Identity = 61/115 (53.04%), Postives = 66/115 (57.39%), Query Frame = 2
Query: 2 GILDINNFKVTHIHCPPPAWINDSYASLDQMDLREPSWLSTCSVRXXXXXXXXXXXXXXXXXXI*SCWQVNQFLFISINT*NDCVNLVQIYL*GSPFNRGLHMLDFYPSISSPCH 346
GILDIN F+VTHIHCPPPAW+NDSYASLDQMDLR+PSWLSTCSV YL GSPF+RGLHMLDFYPSI+SP H
Sbjct: 292 GILDINKFEVTHIHCPPPAWLNDSYASLDQMDLRKPSWLSTCSV----------------------------------------------YLAGSPFDRGLHMLDFYPSINSPSH 360 The following BLAST results are available for this feature:
BLAST of FG539012 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 6
BLAST of FG539012 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 3
BLAST of FG539012 vs. TAIR peptide
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs TAIR 10 peptide) Total hits: 3
BLAST of FG539012 vs. TrEMBL
Analysis Date: 2011-04-27 (Homology Analysis: Pisum sativum unigene v2 vs Trembl) Total hits: 5
BLAST of FG539012 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG539012 ID=FG539012; Name=FG539012; organism=Pisum sativum; type=EST; length=346bpback to top |