AM162190

EST Overview
NameAM162190
Unique NameAM162190
TypeEST
OrganismPisum sativum (pea)
Sequence length369
Libraries
Library NameType
LIBEST_019360 Pisum sativum leaf vegetativecdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of AM162190 vs. TrEMBL
Match: B9I954_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_664200 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.611e-14
Identity = 46/88 (52.27%), Postives = 55/88 (62.50%), Query Frame = 1
Query:  124 NLFDCKAS------SPQCMRXXXXXXXXXXXXQNHAVKTNSHYRKIGRDVMVMATGDAQAEVDSTELPEFVKSIQETWDKVDDKYAVS 369
            +L D KAS      SPQC+             QN   K  ++ RKI R+VM MATG+A AEV STELPE VK++QE WDKV+DKYAVS
Sbjct:   16 SLIDAKASRQSAAASPQCVSLPTLPPPPVQP-QNRPWKATAYCRKIARNVMTMATGEAPAEVASTELPEIVKTVQEAWDKVEDKYAVS 102          
BLAST of AM162190 vs. TrEMBL
Match: C6SZ85_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.022e-14
Identity = 41/76 (53.95%), Postives = 51/76 (67.11%), Query Frame = 1
Query:  142 ASSPQCMRXXXXXXXXXXXXQNHAVKTNSHYRKIGRDVMVMATGDAQAEVDSTELPEFVKSIQETWDKVDDKYAVS 369
            A+SPQC+             QN + KT ++ RK+ R VM MATG+A AE   TE+PE VK++QETWDKVDDKYAVS
Sbjct:   27 AASPQCVSLPPPPLHS----QNRSWKTTAYCRKVARKVMAMATGEAPAEATPTEVPEIVKTLQETWDKVDDKYAVS 98          
BLAST of AM162190 vs. TrEMBL
Match: A9PFP7_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.865e-14
Identity = 46/88 (52.27%), Postives = 55/88 (62.50%), Query Frame = 1
Query:  124 NLFDCKAS------SPQCMRXXXXXXXXXXXXQNHAVKTNSHYRKIGRDVMVMATGDAQAEVDSTELPEFVKSIQETWDKVDDKYAVS 369
            +L D KAS      SPQC+             QN   K  ++ RKI R+VM MATG+A AEV STELPE VK++QE WDKV+DKYAVS
Sbjct:   16 SLIDAKASRQSAAASPQCVSLPTLPPPPVQP-QNGPWKATAYCRKIARNVMTMATGEAPAEVASTELPEIVKTVQEAWDKVEDKYAVS 102          
BLAST of AM162190 vs. TrEMBL
Match: B9GRR8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816652 PE=4 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.361e-12
Identity = 42/88 (47.73%), Postives = 53/88 (60.23%), Query Frame = 1
Query:  124 NLFDCKAS------SPQCMRXXXXXXXXXXXXQNHAVKTNSHYRKIGRDVMVMATGDAQAEVDSTELPEFVKSIQETWDKVDDKYAVS 369
            +L D KAS      SPQC+             +N   K  ++ RKI R+VM MATG+A   V ST+LPE VK++QE WDKV+DKYAVS
Sbjct:   16 SLIDAKASRLSAVASPQCVSLPTLPPPPVQP-RNRPWKAAAYCRKIARNVMTMATGEAPVAVASTDLPEIVKTVQEAWDKVEDKYAVS 102          
BLAST of AM162190 vs. TrEMBL
Match: A9PJN6_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.361e-12
Identity = 42/88 (47.73%), Postives = 53/88 (60.23%), Query Frame = 1
Query:  124 NLFDCKAS------SPQCMRXXXXXXXXXXXXQNHAVKTNSHYRKIGRDVMVMATGDAQAEVDSTELPEFVKSIQETWDKVDDKYAVS 369
            +L D KAS      SPQC+             +N   K  ++ RKI R+VM MATG+A   V ST+LPE VK++QE WDKV+DKYAVS
Sbjct:   16 SLIDAKASRLSAVASPQCVSLPTLPPPPVQP-RNRPWKAAAYCRKIARNVMTMATGEAPVAVASTDLPEIVKTVQEAWDKVEDKYAVS 102          
BLAST of AM162190 vs. TrEMBL
Match: D7U838_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_48.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027447001 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.771e-11
Identity = 32/56 (57.14%), Postives = 44/56 (78.57%), Query Frame = 1
Query:  202 QNHAVKTNSHYRKIGRDVMVMATGDAQAEVDSTELPEFVKSIQETWDKVDDKYAVS 369
            Q+   K  ++ RKI R+V+ MATG+A AEV +TE+PE +K++QE WDKV+DKYAVS
Sbjct:   46 QHRPGKGTTYCRKIARNVIAMATGEAPAEVGTTEVPEIIKTVQEAWDKVEDKYAVS 101          
BLAST of AM162190 vs. TrEMBL
Match: A5C9J2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028013 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.139e-11
Identity = 31/51 (60.78%), Postives = 42/51 (82.35%), Query Frame = 1
Query:  217 KTNSHYRKIGRDVMVMATGDAQAEVDSTELPEFVKSIQETWDKVDDKYAVS 369
            K  ++ RKI R+V+ MATG+A AEV +TE+PE +K++QE WDKV+DKYAVS
Sbjct:   51 KGTTYCRKIARNVIAMATGEAPAEVGTTEVPEIIKTVQEAWDKVEDKYAVS 101          
BLAST of AM162190 vs. TrEMBL
Match: D7LF91_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483848 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.312e-7
Identity = 34/81 (41.98%), Postives = 47/81 (58.02%), Query Frame = 1
Query:  142 ASSPQCMRXXXXXXXXXXXXQNHAVKTNSHYRKIGRDVMVMAT---GDAQA---EVDSTELPEFVKSIQETWDKVDDKYAV 366
            ASSP C+              + A K  ++ RKI R+V+  AT   G+A A   E ++TELPE VK+ QE W+KV+DKYA+
Sbjct:   27 ASSPSCISLPTLPPPPIQS-HSRAAKATAYCRKIVRNVVTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVEDKYAI 106          
BLAST of AM162190 vs. SwissProt
Match: TMP14_ARATH (Thylakoid membrane phosphoprotein 14 kDa, chloroplastic OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2)

HSP 1 Score: 58.9214 bits (141), Expect = 9.171e-9
Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = 1
Query:  127 LFDCKASSPQCMRXXXXXXXXXXXXQNH--AVKTNSHYRKIGRDVMVMAT---GDAQA---EVDSTELPEFVKSIQETWDKVDDKYAV 366
            L    ASSP C+             Q+H  A K  ++ RKI R+V+  AT   G+A A   E ++TELPE VK+ QE W+KVDDKYA+
Sbjct:   22 LASASASSPSCISLPTLPI------QSHTRAAKATAYCRKIVRNVVTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAI 103          
BLAST of AM162190 vs. TAIR peptide
Match: AT2G46820.2 (| Symbols: PTAC8, TMP14, PSAP, PSI-P | photosystem I P subunit | chr2:19243729-19244870 FORWARD LENGTH=174)

HSP 1 Score: 58.9214 bits (141), Expect = 8.099e-10
Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = 1
Query:  127 LFDCKASSPQCMRXXXXXXXXXXXXQNH--AVKTNSHYRKIGRDVMVMAT---GDAQA---EVDSTELPEFVKSIQETWDKVDDKYAV 366
            L    ASSP C+             Q+H  A K  ++ RKI R+V+  AT   G+A A   E ++TELPE VK+ QE W+KVDDKYA+
Sbjct:   22 LASASASSPSCISLPTLPI------QSHTRAAKATAYCRKIVRNVVTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAI 103          
BLAST of AM162190 vs. TAIR peptide
Match: AT2G46820.1 (| Symbols: PTAC8, TMP14, PSAP, PSI-P | photosystem I P subunit | chr2:19243729-19244870 FORWARD LENGTH=174)

HSP 1 Score: 58.9214 bits (141), Expect = 8.099e-10
Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = 1
Query:  127 LFDCKASSPQCMRXXXXXXXXXXXXQNH--AVKTNSHYRKIGRDVMVMAT---GDAQA---EVDSTELPEFVKSIQETWDKVDDKYAV 366
            L    ASSP C+             Q+H  A K  ++ RKI R+V+  AT   G+A A   E ++TELPE VK+ QE W+KVDDKYA+
Sbjct:   22 LASASASSPSCISLPTLPI------QSHTRAAKATAYCRKIVRNVVTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAI 103          
The following BLAST results are available for this feature:
BLAST of AM162190 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 8
Match NameE-valueIdentityDescription
B9I954_POPTR4.611e-1452.27Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C6SZ85_SOYBN6.022e-1453.95Putative uncharacterized protein OS=Glycine max PE... [more]
A9PFP7_POPTR7.865e-1452.27Putative uncharacterized protein OS=Populus tricho... [more]
B9GRR8_POPTR7.361e-1247.73Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PJN6_9ROSI7.361e-1247.73Putative uncharacterized protein OS=Populus tricho... [more]
D7U838_VITVI4.771e-1157.14Whole genome shotgun sequence of line PN40024, sca... [more]
A5C9J2_VITVI8.139e-1160.78Putative uncharacterized protein OS=Vitis vinifera... [more]
D7LF91_ARALY9.312e-741.98Putative uncharacterized protein OS=Arabidopsis ly... [more]
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BLAST of AM162190 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
TMP14_ARATH9.171e-943.18Thylakoid membrane phosphoprotein 14 kDa, chloropl... [more]
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BLAST of AM162190 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G46820.28.099e-1043.18| Symbols: PTAC8, TMP14, PSAP, PSI-P | photosystem... [more]
AT2G46820.18.099e-1043.18| Symbols: PTAC8, TMP14, PSAP, PSI-P | photosystem... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 6..18
score: NAcoord: 33..44
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>AM162190 ID=AM162190; Name=AM162190; organism=Pisum sativum; type=EST; length=369bp
CAATAACTTAGTGGACTCAATTTTTCATAGGAAAATAAAAATTATACACC
TTCAAAAAGTGTTCATTAATTAATAACAATGGCCTTAATCTCATCTTCTT
CTCTCACTATAACCTCTTCCTCTAACCTTTTTGATTGCAAAGCTTCTTCT
CCACAATGTATGAGACTAACCACTCTTCCATCATCACTCCCTTTGTTGTC
TCAGAATCATGCAGTGAAGACAAATTCTCATTATCGAAAGATTGGTCGTG
ATGTTATGGTTATGGCCACTGGAGATGCACAAGCAGAAGTTGATTCAACT
GAACTACCTGAGTTTGTTAAGTCCATTCAAGAAACTTGGGACAAAGTGGA
TGATAAATATGCAGTGAGT
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