EX568742

EST Overview
NameEX568742
Unique NameEX568742
TypeEST
OrganismPisum sativum (pea)
Sequence length452
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
[Close]
BLAST of EX568742 vs. TrEMBL
Match: B7FN60_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.052e-22
Identity = 59/88 (67.05%), Postives = 61/88 (69.32%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALRXXXXXXXXXXXXXXXXXXXXXXXXXXSGKGNVQ 282
            ++HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALR                          SGKGNVQ
Sbjct:   59 KQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVASKAQKSGKGNVQ 146
[Close]
BLAST of EX568742 vs. TrEMBL
Match: Q1SN35_MEDTR (Ribosomal protein L24E OS=Medicago truncatula GN=MtrDRAFT_AC139525g5v2 PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.691e-21
Identity = 52/55 (94.55%), Postives = 55/55 (100.00%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            ++HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKR+EKPEVRDAAREAALR
Sbjct:   59 KQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALR 113
[Close]
BLAST of EX568742 vs. TrEMBL
Match: C6SZ00_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.141e-20
Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            ++HKKDIAQEAVKKRRRA KKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR
Sbjct:   59 KQHKKDIAQEAVKKRRRAAKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
[Close]
BLAST of EX568742 vs. TrEMBL
Match: Q2XPV7_SOLTU (Ribosomal protein L24-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.491e-20
Identity = 51/55 (92.73%), Postives = 55/55 (100.00%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            ++HKKDIAQEAV+KRRRATKKPYSRSIVGATLEVIQKKRAE+PEVRDAAREAALR
Sbjct:   59 KQHKKDIAQEAVRKRRRATKKPYSRSIVGATLEVIQKKRAERPEVRDAAREAALR 113
[Close]
BLAST of EX568742 vs. TrEMBL
Match: D7LUD5_ARALY (Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_485677 PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.543e-20
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            ++HKKD AQEAVK+RRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR
Sbjct:   55 KQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 109
[Close]
BLAST of EX568742 vs. TrEMBL
Match: D7LJ56_ARALY (RPL24A OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_482640 PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.543e-20
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            ++HKKD AQEAVK+RRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR
Sbjct:   59 KQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
[Close]
BLAST of EX568742 vs. TrEMBL
Match: C6SVV1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.543e-20
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            ++HKKDIAQEAV+KRRRA KKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR
Sbjct:   59 KQHKKDIAQEAVRKRRRAAKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
[Close]
BLAST of EX568742 vs. TrEMBL
Match: B7FGN9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.543e-20
Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            ++HKKDIAQEAVKKRRRATKKPYSRSIVG TLEVIQKKR EKPEVRDAAREAALR
Sbjct:   59 KQHKKDIAQEAVKKRRRATKKPYSRSIVGTTLEVIQKKRTEKPEVRDAAREAALR 113
[Close]
BLAST of EX568742 vs. TrEMBL
Match: C6TFG4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.321e-20
Identity = 56/87 (64.37%), Postives = 58/87 (66.67%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALRXXXXXXXXXXXXXXXXXXXXXXXXXXSGKGNV 279
            ++HKKDIAQEAVKKRRRA KKPYSRSIVGATLEVIQKKRAEKPEVRDA REAALR                           GKGNV
Sbjct:   59 KRHKKDIAQEAVKKRRRAAKKPYSRSIVGATLEVIQKKRAEKPEVRDANREAALREIKERNKKTKDEKKAKKAEFAKSQKSQGKGNV 145
[Close]
BLAST of EX568742 vs. TrEMBL
Match: C6SXT2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.321e-20
Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            ++HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKR EKPEVRDAAREA LR
Sbjct:   59 KQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAQLR 113
[Close]
BLAST of EX568742 vs. SwissProt
Match: RL242_ARATH (60S ribosomal protein L24-2 OS=Arabidopsis thaliana GN=RPL24B PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 1.545e-21
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            ++HKKD AQEAVK+RRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR
Sbjct:   59 KQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
[Close]
BLAST of EX568742 vs. SwissProt
Match: RL241_ARATH (60S ribosomal protein L24-1 OS=Arabidopsis thaliana GN=RPL24A PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 1.545e-21
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            ++HKKD AQEAVK+RRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR
Sbjct:   59 KQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
[Close]
BLAST of EX568742 vs. SwissProt
Match: RL24_CICAR (60S ribosomal protein L24 OS=Cicer arietinum GN=RPL24 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.018e-21
Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            ++HKKD AQEAVKKRRRATKKPYSRSIVGATLEVIQKKR EKPEVRDAAREAALR
Sbjct:   59 KQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALR 113
[Close]
BLAST of EX568742 vs. SwissProt
Match: RL24_PRUAV (60S ribosomal protein L24 OS=Prunus avium GN=RPL24 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 3.442e-21
Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            ++HKKDIAQEAVKKRRR TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALR
Sbjct:   59 KQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 113
[Close]
BLAST of EX568742 vs. SwissProt
Match: RL24_HORVU (60S ribosomal protein L24 OS=Hordeum vulgare GN=RPL24 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.805e-20
Identity = 49/55 (89.09%), Postives = 51/55 (92.73%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            ++HKKDI  EA KKRRR TKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR
Sbjct:   59 KQHKKDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
[Close]
BLAST of EX568742 vs. SwissProt
Match: RL24B_SCHPO (60S ribosomal protein L24-B OS=Schizosaccharomyces pombe GN=rpl24b PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 6.732e-9
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            R HKK I++E  KKR R T K + R IVGA L+VI++KR ++PEVR AAR AAL+
Sbjct:   57 RMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALK 110
[Close]
BLAST of EX568742 vs. SwissProt
Match: RL24A_SCHPO (60S ribosomal protein L24-A OS=Schizosaccharomyces pombe GN=rpl24a PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 6.732e-9
Identity = 32/55 (58.18%), Postives = 41/55 (74.55%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            R HKK I++E  KKR R T K + R IVGA L+VI++KR ++PEVR AAR AAL+
Sbjct:   57 RMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALK 110
[Close]
BLAST of EX568742 vs. SwissProt
Match: RL24_NEUCR (60S ribosomal protein L24 OS=Neurospora crassa GN=rpl-24 PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.959e-8
Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            R+HKK I++E  KKR R T K   R+IVGA+LEVI+++R+ +PE R AAR AA++
Sbjct:   57 RQHKKGISEEVAKKRSRRTVKA-QRAIVGASLEVIKERRSMRPEARSAARLAAIK 110
[Close]
BLAST of EX568742 vs. SwissProt
Match: RL24_DROME (60S ribosomal protein L24 OS=Drosophila melanogaster GN=RpL24 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.658e-7
Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            RKH+K I +EA KKR R T+K + R+IVGA+L  I  KR  KPEVR A R+ A++
Sbjct:   57 RKHRKGIEEEASKKRTRRTQK-FQRAIVGASLAEILAKRNMKPEVRKAQRDQAIK 110
[Close]
BLAST of EX568742 vs. SwissProt
Match: RL24_DICDI (60S ribosomal protein L24 OS=Dictyostelium discoideum GN=rpl24 PE=3 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 3.694e-7
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            R +K      + KK+ R TKK   R+IVGA+LEVIQ+KRA+KPEV+ AA E A R
Sbjct:   57 RIYKNTTTDVSAKKKARKTKK-VERNIVGASLEVIQQKRAQKPEVKQAAAEQAKR 110
[Close]
BLAST of EX568742 vs. TAIR peptide
Match: AT3G53020.1 (| Symbols: STV1, RPL24B, RPL24 | Ribosomal protein L24e family protein | chr3:19660749-19661912 REVERSE LENGTH=163)

HSP 1 Score: 101.679 bits (252), Expect = 1.820e-22
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            ++HKKD AQEAVK+RRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR
Sbjct:   59 KQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
[Close]
BLAST of EX568742 vs. TAIR peptide
Match: AT2G36620.1 (| Symbols: RPL24A | ribosomal protein L24 | chr2:15350548-15351819 REVERSE LENGTH=164)

HSP 1 Score: 101.679 bits (252), Expect = 1.820e-22
Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 1 
Query:   19 RKHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 183
            ++HKKD AQEAVK+RRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR
Sbjct:   59 KQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALR 113
The following BLAST results are available for this feature:
BLAST of EX568742 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FN60_MEDTR6.052e-2267.05Putative uncharacterized protein OS=Medicago trunc... [more]
Q1SN35_MEDTR6.691e-2194.55Ribosomal protein L24E OS=Medicago truncatula GN=M... [more]
C6SZ00_SOYBN1.141e-2094.55Putative uncharacterized protein OS=Glycine max PE... [more]
Q2XPV7_SOLTU1.491e-2092.73Ribosomal protein L24-like protein OS=Solanum tube... [more]
D7LUD5_ARALY2.543e-2092.73Putative uncharacterized protein (Fragment) OS=Ara... [more]
D7LJ56_ARALY2.543e-2092.73RPL24A OS=Arabidopsis lyrata subsp. lyrata GN=ARAL... [more]
C6SVV1_SOYBN2.543e-2092.73Putative uncharacterized protein OS=Glycine max PE... [more]
B7FGN9_MEDTR2.543e-2092.73Putative uncharacterized protein OS=Medicago trunc... [more]
C6TFG4_SOYBN3.321e-2064.37Putative uncharacterized protein OS=Glycine max PE... [more]
C6SXT2_SOYBN3.321e-2092.73Putative uncharacterized protein OS=Glycine max PE... [more]
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BLAST of EX568742 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RL242_ARATH1.545e-2192.7360S ribosomal protein L24-2 OS=Arabidopsis thalian... [more]
RL241_ARATH1.545e-2192.7360S ribosomal protein L24-1 OS=Arabidopsis thalian... [more]
RL24_CICAR2.018e-2192.7360S ribosomal protein L24 OS=Cicer arietinum GN=RP... [more]
RL24_PRUAV3.442e-2190.9160S ribosomal protein L24 OS=Prunus avium GN=RPL24... [more]
RL24_HORVU3.805e-2089.0960S ribosomal protein L24 OS=Hordeum vulgare GN=RP... [more]
RL24B_SCHPO6.732e-958.1860S ribosomal protein L24-B OS=Schizosaccharomyces... [more]
RL24A_SCHPO6.732e-958.1860S ribosomal protein L24-A OS=Schizosaccharomyces... [more]
RL24_NEUCR1.959e-854.5560S ribosomal protein L24 OS=Neurospora crassa GN=... [more]
RL24_DROME1.658e-754.5560S ribosomal protein L24 OS=Drosophila melanogast... [more]
RL24_DICDI3.694e-754.5560S ribosomal protein L24 OS=Dictyostelium discoid... [more]
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BLAST of EX568742 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G53020.11.820e-2292.73| Symbols: STV1, RPL24B, RPL24 | Ribosomal protein... [more]
AT2G36620.11.820e-2292.73| Symbols: RPL24A | ribosomal protein L24 | chr2:1... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000988Ribosomal protein L24ePANTHERPTHR1079260S RIBOSOMAL PROTEIN L24coord: 7..111
score: 3.6
NoneNo IPR availablePANTHERPTHR10792:SF160S RIBOSOMAL PROTEIN L24coord: 7..111
score: 3.6
NoneNo IPR availableSEGsegsegcoord: 62..87
score: NAcoord: 95..110
score
NoneNo IPR availableSEGsegsegcoord: 31..49
score: NAcoord: 61..72
score
NoneNo IPR availableSEGsegsegcoord: 9..42
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX568742 ID=EX568742; Name=EX568742; organism=Pisum sativum; type=EST; length=452bp
CTAAGAGGACGGACAGAACGCAAACACAAGAAGGACATTGCCCAAGAAGC
TGTGAAGAAGAGACGCCGTGCTACCAAGAAGCCATACTCTAGGTCCATTG
TAGGTGCCACTTTGGAAGTCATTCAGAAGAAAAGAGCTGAGAAGCCTGAA
GTTCGAGATGCCGCCAGGGAAGCTGCTCTGCGTGAAATCAAAGAGAGGAT
TAAGAAAACAAAGGATGAGAAGAAAGCCAAGAAAGCAGAAGTAGCATCTA
AGGCACAAAAATCTGGCAAAGGCAATGTTCAGAAAGGTGGTTTGCCCAAG
GGTCCTAAATTGGGCGGTGGCGGCGGTAAACGCTGATCAGTTCCAATTTT
GGCTACAAATTAAATACTTTTTGGTTGAATCTTTTGTATCAATATTTTAT
TTGCTTGTTTAGCCTTTGTTGCCTAATTACCAGACTTATTTTGGGGCTTC
AG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR000988Ribosomal_eL24-rel