EX569165

EST Overview


Name	EX569165
Unique Name	EX569165
Type	EST
Organism	Pisum sativum (pea)
Sequence length	458

Libraries


Library Name	Type
LIBEST_021973 Pisum sativum shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v2	Pisum sativum unigene v2	EST
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Pisum sativum unigene v2	2011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins	2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides	2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins	2011-04-21
InterProScan analysis for Pisum sativum unigene v2	2011-04-27
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of EX569165 vs. Lotus protein
Match: chr2.CM1032.110.r2.m (+ phase: 0 )

HSP 1 Score: 53.9138 bits (128), Expect = 2.699e-8
Identity = 27/49 (55.10%), Postives = 30/49 (61.22%), Query Frame = 2

Query:  164 EHEDGKDLVSLGSLKWRGSGGWXXXXXXXXXXXXNFKPRVSPRAIHQPR 310
            E E+GK+LVSLG LKW GSG                KPR+SPRAIHQPR
Sbjct:   89 EEEEGKELVSLGMLKWPGSGARAEVPRYAEKKPKFVKPRMSPRAIHQPR 137

[Close]

BLAST of EX569165 vs. Soybean peptides
Match: Glyma02g42860.2|PACid:16249959 ()

HSP 1 Score: 52.7582 bits (125), Expect = 1.478e-7
Identity = 26/50 (52.00%), Postives = 31/50 (62.00%), Query Frame = 2

Query:  164 EHEDGKDLVSLGSLKWRG-SGGWXXXXXXXXXXXXNFKPRVSPRAIHQPR 310
            E ++GK++VSLG LKWR   GGW              KP+VSPRAIHQPR
Sbjct:   75 ERKEGKEVVSLGVLKWRSCGGGWAQAPRYVEKAPKFVKPKVSPRAIHQPR 124

[Close]

BLAST of EX569165 vs. Soybean peptides
Match: Glyma02g42860.1|PACid:16249958 ()

HSP 1 Score: 52.7582 bits (125), Expect = 1.478e-7
Identity = 26/50 (52.00%), Postives = 31/50 (62.00%), Query Frame = 2

Query:  164 EHEDGKDLVSLGSLKWRG-SGGWXXXXXXXXXXXXNFKPRVSPRAIHQPR 310
            E ++GK++VSLG LKWR   GGW              KP+VSPRAIHQPR
Sbjct:   76 ERKEGKEVVSLGVLKWRSCGGGWAQAPRYVEKAPKFVKPKVSPRAIHQPR 125

[Close]

BLAST of EX569165 vs. Soybean peptides
Match: Glyma14g05980.2|PACid:16294521 ()

HSP 1 Score: 51.9878 bits (123), Expect = 2.521e-7
Identity = 26/50 (52.00%), Postives = 31/50 (62.00%), Query Frame = 2

Query:  164 EHEDGKDLVSLGSLKWRG-SGGWXXXXXXXXXXXXNFKPRVSPRAIHQPR 310
            E ++GK++VSLG LKWR   GGW              KP+VSPRAIHQPR
Sbjct:   76 EGKEGKEVVSLGVLKWRSCGGGWAEAPRYVEKAPKFVKPKVSPRAIHQPR 125

[Close]

BLAST of EX569165 vs. Soybean peptides
Match: Glyma14g05980.1|PACid:16294520 ()

HSP 1 Score: 51.9878 bits (123), Expect = 2.521e-7
Identity = 26/50 (52.00%), Postives = 31/50 (62.00%), Query Frame = 2

Query:  164 EHEDGKDLVSLGSLKWRG-SGGWXXXXXXXXXXXXNFKPRVSPRAIHQPR 310
            E ++GK++VSLG LKWR   GGW              KP+VSPRAIHQPR
Sbjct:   76 EGKEGKEVVSLGVLKWRSCGGGWAEAPRYVEKAPKFVKPKVSPRAIHQPR 125

[Close]

BLAST of EX569165 vs. Medicago proteins
Match: IMGA|Medtr5g083690.1 (Polyadenylate-binding protein-interacting protein 2 (AHRD V1 *-*- Q94AR4) chr05_pseudomolecule_IMGAG_V3.5 35093973-35095013 F EGN_Mt100125 20100825)

HSP 1 Score: 65.855 bits (159), Expect = 9.871e-12
Identity = 30/52 (57.69%), Postives = 34/52 (65.38%), Query Frame = 2

Query:  155 VRVEHEDGKDLVSLGSLKWRGSGGWXXXXXXXXXXXXNFKPRVSPRAIHQPR 310
            +  +HEDGK+L+ LGSLKWRGS GW              KPRVSPRAIHQPR
Sbjct:   83 IEPQHEDGKELMKLGSLKWRGSDGWAEVPRYAEKAPKIVKPRVSPRAIHQPR 134

The following BLAST results are available for this feature:

BLAST of EX569165 vs. Lotus protein
BLAST of EX569165 vs. Soybean peptides
BLAST of EX569165 vs. Medicago proteins

BLAST of EX569165 vs. Lotus protein
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins)
Total hits: 1


Match Name	E-value	Identity	Description
chr2.CM1032.110.r2.m	2.699e-8	55.10	+ phase: 0	[more]

BLAST of EX569165 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides)
Total hits: 4


Match Name	E-value	Identity
Glyma02g42860.2\|PACid:16249959	1.478e-7	52.00	[more]
Glyma02g42860.1\|PACid:16249958	1.478e-7	52.00	[more]
Glyma14g05980.2\|PACid:16294521	2.521e-7	52.00	[more]
Glyma14g05980.1\|PACid:16294520	2.521e-7	52.00	[more]

BLAST of EX569165 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 1


Match Name	E-value	Identity	Description
IMGA\|Medtr5g083690.1	9.871e-12	57.69	Polyadenylate-binding protein-interacting protein ...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 32..43 score
None	No IPR available	SEG	seg	seg	coord: 11..23 score
None	No IPR available	SEG	seg	seg	coord: 9..24 score: NAcoord: 47..66 score

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 32..43 score
None	No IPR available	SEG	seg	seg	coord: 11..23 score
None	No IPR available	SEG	seg	seg	coord: 9..24 score: NAcoord: 47..66 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v2
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EX569165 ID=EX569165; Name=EX569165; organism=Pisum sativum; type=EST; length=458bp
AACGACGCATTTTCGGATTTTGATATGGATGAAGACGATCTTTTCCATGT
CCATCAAATTGAACACCGTAAGCTATTTTTATTTAATTTCTACTTATTTT
TTTTATTTAAATAAAGTTTAAACGTTTATTGATTAACGGATCTGGTGTTT
TTTGGTTCGTGTAGAACACGAAGATGGGAAAGATTTGGTCTCGTTGGGAT
CGTTGAAATGGAGAGGATCTGGTGGGTGGGCTGAAGCTCCGAAATATGCG
GAGAAGGCTCCGAAGAATTTTAAGCCCAGAGTGAGCCCACGGGCTATTCA
TCAGCCTAGGTAGATTGGTGGCAAGTGGTGTTGTAAATAAAAAAAGAGTC
GCTTGAGGCGTAGTATGAAAATAACTAGATGTATGATTTCAGAGTTTTCT
TGTAATTTCCCATTTTCGTTTTGCTTGTTGACTAATCAGTTGTTTAGTTT
CAGTGTAT

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