EX570066
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX570066 vs. TrEMBL
Match: D7KAQ2_ARALY (NRAMP2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_891495 PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.289e-10 Identity = 35/65 (53.85%), Postives = 43/65 (66.15%), Query Frame = 3 Query: 3 VINGYLLVDFFVSEVNGVLFGFVACSCTVLYIAFLVYLISQSGALPSALVD---RLPKGFSVTEN 188 +INGYLL+DFFVSEV+G +FG C T YIAF+VYLIS S PS LPK SV+++ Sbjct: 468 IINGYLLLDFFVSEVDGFMFGVTVCVWTTAYIAFIVYLISHSNFFPSPWSSSSIELPKRVSVSDS 532
BLAST of EX570066 vs. TrEMBL
Match: D7TTB5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_129.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000173001 PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 6.465e-8 Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 3 Query: 3 VINGYLLVDFFVSEVNGVLFGFVACSCTVLYIAFLVYLI 119 +INGYLLVDFF SEVNG+L GF C+ T Y+AF++YL+ Sbjct: 349 IINGYLLVDFFSSEVNGLLIGFFICTFTAAYVAFIIYLV 387
BLAST of EX570066 vs. TrEMBL
Match: B9GNS0_POPTR (Nramp transporter (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_412792 PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 6.465e-8 Identity = 25/41 (60.98%), Postives = 36/41 (87.80%), Query Frame = 3 Query: 3 VINGYLLVDFFVSEVNGVLFGFVACSCTVLYIAFLVYLISQ 125 +INGYLL+DFF+SEV G+LFGF+ S TV Y++F++YL+S+ Sbjct: 441 LINGYLLIDFFISEVKGLLFGFLIGSGTVAYVSFIIYLVSR 481
BLAST of EX570066 vs. TrEMBL
Match: Q2QN30_ORYSJ (Metal transporter Nramp2, putative, expressed OS=Oryza sativa subsp. japonica GN=Os12g0581600 PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 5.473e-7 Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 3 Query: 6 INGYLLVDFFVSEVNGVLFGFVACSCTVLYIAFLVYLISQSGALPSALVDRLPKGFS 176 INGYLL+DFF SE+ G+L G + C + Y +F++YLI + LP+ ++ + K FS Sbjct: 485 INGYLLLDFFSSEIRGLLSGSILCVAVLAYASFVLYLILRGTELPNQIITTIRKSFS 541
BLAST of EX570066 vs. TrEMBL
Match: A2ZM32_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38891 PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 5.473e-7 Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 3 Query: 6 INGYLLVDFFVSEVNGVLFGFVACSCTVLYIAFLVYLISQSGALPSALVDRLPKGFS 176 INGYLL+DFF SE+ G+L G + C + Y +F++YLI + LP+ ++ + K FS Sbjct: 485 INGYLLLDFFSSEIRGLLSGSILCVAVLAYASFVLYLILRGTELPNQIITTIRKSFS 541
BLAST of EX570066 vs. SwissProt
Match: NRAM2_ARATH (Metal transporter Nramp2 OS=Arabidopsis thaliana GN=NRAMP2 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.216e-11 Identity = 36/65 (55.38%), Postives = 42/65 (64.62%), Query Frame = 3 Query: 3 VINGYLLVDFFVSEVNGVLFGFVACSCTVLYIAFLVYLISQSGALPSALVD---RLPKGFSVTEN 188 +INGYLL+DFFVSEV+G LFG C T YIAF+VYLIS S PS LPK SV+ + Sbjct: 466 IINGYLLLDFFVSEVDGFLFGVTVCVWTTAYIAFIVYLISHSNFFPSPWSSSSIELPKRVSVSNS 530
BLAST of EX570066 vs. TAIR peptide
Match: AT1G47240.1 (| Symbols: NRAMP2, ATNRAMP2 | NRAMP metal ion transporter 2 | chr1:17309043-17311308 REVERSE LENGTH=530) HSP 1 Score: 67.3958 bits (163), Expect = 3.867e-12 Identity = 36/65 (55.38%), Postives = 42/65 (64.62%), Query Frame = 3 Query: 3 VINGYLLVDFFVSEVNGVLFGFVACSCTVLYIAFLVYLISQSGALPSALVD---RLPKGFSVTEN 188 +INGYLL+DFFVSEV+G LFG C T YIAF+VYLIS S PS LPK SV+ + Sbjct: 466 IINGYLLLDFFVSEVDGFLFGVTVCVWTTAYIAFIVYLISHSNFFPSPWSSSSIELPKRVSVSNS 530
BLAST of EX570066 vs. TAIR peptide
Match: AT4G18790.1 (| Symbols: NRAMP5, ATNRAMP5 | NRAMP metal ion transporter family protein | chr4:10317785-10319660 REVERSE LENGTH=530) HSP 1 Score: 50.8322 bits (120), Expect = 3.746e-7 Identity = 23/48 (47.92%), Postives = 34/48 (70.83%), Query Frame = 3 Query: 3 VINGYLLVDFFVSEVNGVLFGFVACSCTVLYIAFLVYLISQSGALPSA 146 +INGYLL+DFF++EV G L GF+ V YI+F++YL+S + S+ Sbjct: 468 MINGYLLLDFFMAEVEGFLVGFLVFGGVVGYISFIIYLVSYRSSQSSS 515 The following BLAST results are available for this feature:
BLAST of EX570066 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 5
BLAST of EX570066 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 1
BLAST of EX570066 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX570066 ID=EX570066; Name=EX570066; organism=Pisum sativum; type=EST; length=456bpback to top |