EX570376

EST Overview
NameEX570376
Unique NameEX570376
TypeEST
OrganismPisum sativum (pea)
Sequence length369
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of EX570376 vs. TrEMBL
Match: B9S802_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1383260 PE=4 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 9.287e-31
Identity = 65/95 (68.42%), Postives = 78/95 (82.11%), Query Frame = 2
Query:    2 QAQKYLKSMSTNDLCFFYHSGTKARRIVGVVTVVKEWYTDEEDDGAVDVKAVGEMRRAVDLKEMKD---LKDFVLLKQPRLSVVPVPDLIWDCIC 277
            QAQK LK+M+  DLCFFYHSG KARR+VGVV VVKEWY++++D+  VDVKAVGEMRR VDLKEMK+   L DF L +QPRLSVVPVP  +W+ +C
Sbjct:   38 QAQKNLKAMNIKDLCFFYHSGAKARRVVGVVAVVKEWYSNDDDEVVVDVKAVGEMRRPVDLKEMKNDDGLSDFALFRQPRLSVVPVPKEVWERVC 132          
BLAST of EX570376 vs. TrEMBL
Match: D7L2N4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_319455 PE=4 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.692e-29
Identity = 66/97 (68.04%), Postives = 77/97 (79.38%), Query Frame = 2
Query:    2 QAQKYLKSMSTNDLCFFYHSGTKARRIVGVVTVVKEWYT-DEEDDGAVDVKAVGEMRRAVDLKEMKD----LKDFVLLKQPRLSVVPVPDLIWDCIC 277
            QAQK LKSM+  DLCFFYHSGTKAR +VGVV V +EWYT D+E +GAVDVKA+GEMR+ VDLKEMK     +K FVL +QPRLSVVPV + +W  IC
Sbjct:   38 QAQKNLKSMTLGDLCFFYHSGTKARCVVGVVEVSREWYTDDDEGEGAVDVKAIGEMRKCVDLKEMKGDKGIIKSFVLFRQPRLSVVPVEEDVWKKIC 134          
BLAST of EX570376 vs. TrEMBL
Match: Q9ZVK5_ARATH (At2g14660 OS=Arabidopsis thaliana GN=At2g14660 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 5.634e-28
Identity = 65/101 (64.36%), Postives = 77/101 (76.24%), Query Frame = 2
Query:    2 QAQKYLKSMSTNDLCFFYHSGTKARRIVGVVTVVKEWYTDE----EDDGAVDVKAVGEMRRAVDLKEMKD-----LKDFVLLKQPRLSVVPVPDLIWDCIC 277
            QAQK LKSM+  DLCFFYHSGTK+R +VGVV V +EWYTD+    E +GAVDVKA+GEMR+ VDLKEMK       K FVL +QPRLSVVPV + +W+ IC
Sbjct:   38 QAQKNLKSMTLGDLCFFYHSGTKSRCVVGVVEVSREWYTDDAEGVEGEGAVDVKAIGEMRKCVDLKEMKGDKGIITKGFVLFRQPRLSVVPVEEDVWNMIC 138          
BLAST of EX570376 vs. TrEMBL
Match: B9HN19_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_649704 PE=4 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 5.634e-28
Identity = 64/95 (67.37%), Postives = 75/95 (78.95%), Query Frame = 2
Query:    2 QAQKYLKSMSTNDLCFFYHSGTKARRIVGVVTVVKEWYTDEEDDGAVDVKAVGEMRRAVDLKEMK---DLKDFVLLKQPRLSVVPVPDLIWDCIC 277
            QAQK LK+M  NDLCFFYHSG+ ARR+VGVVTVV+EWY DE  +G VDVKAVGEMRR +DLKE+K    LK F L +QPRLSVVPV   +W+ +C
Sbjct:   38 QAQKNLKAMKLNDLCFFYHSGSNARRVVGVVTVVREWY-DEGGEGVVDVKAVGEMRRPLDLKELKGDEGLKGFQLFRQPRLSVVPVSKEVWERVC 131          
BLAST of EX570376 vs. TrEMBL
Match: Q8LCV6_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.796e-27
Identity = 64/101 (63.37%), Postives = 76/101 (75.25%), Query Frame = 2
Query:    2 QAQKYLKSMSTNDLCFFYHSGTKARRIVGVVTVVKEWYTDE----EDDGAVDVKAVGEMRRAVDLKEMK-----DLKDFVLLKQPRLSVVPVPDLIWDCIC 277
            QAQK LKSM+  DLCFFYHSGTKAR +VG+V V +EWYT +    E +GAVDVKA+GEMR+ VDLKEMK       K FVL +QPRLSVVPV + +W+ IC
Sbjct:   38 QAQKNLKSMTLGDLCFFYHSGTKARSVVGLVEVSREWYTGDDEGVEGEGAVDVKAIGEMRKCVDLKEMKGDKGISTKGFVLFRQPRLSVVPVEEDVWNKIC 138          
BLAST of EX570376 vs. TrEMBL
Match: A5BL95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034945 PE=4 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.136e-27
Identity = 66/99 (66.67%), Postives = 75/99 (75.76%), Query Frame = 2
Query:    2 QAQKYLKSMSTNDLCFFYHSGTKARRIVGVVTVVKEWYTDEEDD----GAVDVKAVGEMRRAVDLKEMK---DLKDFVLLKQPRLSVVPVPDLIWDCIC 277
            QAQK LK+M   DLCFFYHSG KARR+VGVV+VV+EWY  EE D    GAVDV+ VGEMRRAVDL EMK    LK F L +QPRLSVVPVP+ +W  +C
Sbjct:   38 QAQKNLKAMHLGDLCFFYHSGAKARRVVGVVSVVREWY--EEGDGGAGGAVDVRCVGEMRRAVDLGEMKKESGLKGFGLFRQPRLSVVPVPEEVWKRVC 134          
BLAST of EX570376 vs. TrEMBL
Match: D5AEC1_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.911e-21
Identity = 53/99 (53.54%), Postives = 69/99 (69.70%), Query Frame = 2
Query:    2 QAQKYLKSMSTNDLCFFYHSGTKARRIVGVVTVVKEWYTDEEDD----GAVDVKAVGEMRRAVDLKEMK---DLKDFVLLKQPRLSVVPVPDLIWDCIC 277
            QAQ  +K+M+  DLCFFYHSG K ++IVG+V V+KE Y D  D     G VDV+AV  + + V L ++K   +LKDFV++KQPRLSVVPV D IW  +C
Sbjct:   35 QAQNNMKAMNVGDLCFFYHSGKKDKQIVGIVKVIKESYADPSDPSGKYGVVDVEAVSPLEKPVTLAQIKQDEELKDFVMIKQPRLSVVPVTDKIWTRLC 133          
BLAST of EX570376 vs. TrEMBL
Match: Q9FRF6_ORYSJ (Putative uncharacterized protein Os03g47260 OS=Oryza sativa subsp. japonica GN=Os03g47260 PE=4 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.065e-18
Identity = 54/108 (50.00%), Postives = 67/108 (62.04%), Query Frame = 2
Query:    2 QAQKYLKSMSTNDLCFFYHSGTKA--RRIVGVVTVVKEWYTDEED---DGAVDVKAVGEMRRAVDLKEMKD-----------LKDFVLLKQPRLSVVPVPDLIWDCIC 277
            QA   L++M   D C FYHSG  A  RR+VGVV V +EWY  E +    GAVDV+AVGE RR V L E+K            +++F LL+QPRLSV+PVP  +WD IC
Sbjct:   90 QAVNGLRAMRVGDRCLFYHSGAGAASRRVVGVVEVAREWYEGEGEAASGGAVDVRAVGEFRRPVALGEIKKAAGGGGGEVEGMREFALLRQPRLSVMPVPAKVWDWIC 197          
BLAST of EX570376 vs. TrEMBL
Match: Q10F97_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=Os03g0676100 PE=4 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.065e-18
Identity = 54/108 (50.00%), Postives = 67/108 (62.04%), Query Frame = 2
Query:    2 QAQKYLKSMSTNDLCFFYHSGTKA--RRIVGVVTVVKEWYTDEED---DGAVDVKAVGEMRRAVDLKEMKD-----------LKDFVLLKQPRLSVVPVPDLIWDCIC 277
            QA   L++M   D C FYHSG  A  RR+VGVV V +EWY  E +    GAVDV+AVGE RR V L E+K            +++F LL+QPRLSV+PVP  +WD IC
Sbjct:   52 QAVNGLRAMRVGDRCLFYHSGAGAASRRVVGVVEVAREWYEGEGEAASGGAVDVRAVGEFRRPVALGEIKKAAGGGGGEVEGMREFALLRQPRLSVMPVPAKVWDWIC 159          
BLAST of EX570376 vs. TrEMBL
Match: A2XKL1_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12991 PE=4 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.065e-18
Identity = 54/108 (50.00%), Postives = 67/108 (62.04%), Query Frame = 2
Query:    2 QAQKYLKSMSTNDLCFFYHSGTKA--RRIVGVVTVVKEWYTDEED---DGAVDVKAVGEMRRAVDLKEMKD-----------LKDFVLLKQPRLSVVPVPDLIWDCIC 277
            QA   L++M   D C FYHSG  A  RR+VGVV V +EWY  E +    GAVDV+AVGE RR V L E+K            +++F LL+QPRLSV+PVP  +WD IC
Sbjct:   52 QAVNGLRAMRVGDRCLFYHSGAGAASRRVVGVVEVAREWYEGEGEAASGGAVDVRAVGEFRRPVALGEIKKAAGGGGGEVEGMREFALLRQPRLSVMPVPAKVWDWIC 159          
BLAST of EX570376 vs. SwissProt
Match: THYN1_MOUSE (Thymocyte nuclear protein 1 OS=Mus musculus GN=Thyn1 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.329e-7
Identity = 41/120 (34.17%), Postives = 57/120 (47.50%), Query Frame = 2
Query:    2 QAQKYLKSMSTNDLCFFYHSGTKARRIVGVVTVVKEWYTD---------------EEDD---GAVDVKAVGEMRRAVDLKEMK-----------DLKDFVLLKQPRLSVVPVPDLIWDCI 274
            QA+ +L++M   D  FFYHS  K   IVG++ +VKE Y D               +EDD     VDV+ V  M+R + L+E+K            LK   L  + RLSV P+    +D I
Sbjct:   98 QARNFLRAMKLEDEAFFYHSNCKQPGIVGLMKIVKEAYPDHTQFEKSNPHYDPSSKEDDPKWSMVDVQFVRMMKRFIPLEELKTYHQAHKATGGPLKSMTLFTRQRLSVQPLTQEEFDFI 217          
BLAST of EX570376 vs. TAIR peptide
Match: AT2G14660.1 (| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0310 (InterPro:IPR002740); Has 2761 Blast hits to 2761 proteins in 686 species: Archae - 5; Bacteria - 1143; Metazoa - 73; Fungi - 78; Plants - 42; Viruses - 0; Other Eukaryotes - 1420 (source: NCBI BLink). | chr2:6272506-6272982 FORWARD LENGTH=158)

HSP 1 Score: 127.102 bits (318), Expect = 2.429e-30
Identity = 65/101 (64.36%), Postives = 77/101 (76.24%), Query Frame = 2
Query:    2 QAQKYLKSMSTNDLCFFYHSGTKARRIVGVVTVVKEWYTDE----EDDGAVDVKAVGEMRRAVDLKEMKD-----LKDFVLLKQPRLSVVPVPDLIWDCIC 277
            QAQK LKSM+  DLCFFYHSGTK+R +VGVV V +EWYTD+    E +GAVDVKA+GEMR+ VDLKEMK       K FVL +QPRLSVVPV + +W+ IC
Sbjct:   38 QAQKNLKSMTLGDLCFFYHSGTKSRCVVGVVEVSREWYTDDAEGVEGEGAVDVKAIGEMRKCVDLKEMKGDKGIITKGFVLFRQPRLSVVPVEEDVWNMIC 138          
The following BLAST results are available for this feature:
BLAST of EX570376 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9S802_RICCO9.287e-3168.42Putative uncharacterized protein OS=Ricinus commun... [more]
D7L2N4_ARALY8.692e-2968.04Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9ZVK5_ARATH5.634e-2864.36At2g14660 OS=Arabidopsis thaliana GN=At2g14660 PE=... [more]
B9HN19_POPTR5.634e-2867.37Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q8LCV6_ARATH2.796e-2763.37Putative uncharacterized protein OS=Arabidopsis th... [more]
A5BL95_VITVI8.136e-2766.67Putative uncharacterized protein OS=Vitis vinifera... [more]
D5AEC1_PICSI3.911e-2153.54Putative uncharacterized protein OS=Picea sitchens... [more]
Q9FRF6_ORYSJ1.065e-1850.00Putative uncharacterized protein Os03g47260 OS=Ory... [more]
Q10F97_ORYSJ1.065e-1850.00Expressed protein OS=Oryza sativa subsp. japonica ... [more]
A2XKL1_ORYSI1.065e-1850.00Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of EX570376 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
THYN1_MOUSE1.329e-734.17Thymocyte nuclear protein 1 OS=Mus musculus GN=Thy... [more]
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BLAST of EX570376 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G14660.12.429e-3064.36| Symbols: | unknown protein; CONTAINS InterPro D... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002740Protein of unknown function DUF55PFAMPF01878DUF55coord: 1..93
score: 5.7
IPR015947Pseudouridine synthase/archaeosine transglycosylase-likeSUPERFAMILY88697PUA domain-likecoord: 1..96
score: 1.1
NoneNo IPR availableGENE3D3.10.590.10no descriptioncoord: 3..42
score: 7.5
NoneNo IPR availableSEGsegsegcoord: 93..106
score
NoneNo IPR availableSEGsegsegcoord: 26..39
score: NAcoord: 44..68
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570376 ID=EX570376; Name=EX570376; organism=Pisum sativum; type=EST; length=369bp
ACAAGCTCAGAAATACCTGAAATCAATGTCAACCAACGATCTCTGCTTCT
TCTACCACTCCGGTACGAAGGCTCGTCGTATCGTCGGCGTAGTTACCGTC
GTCAAGGAATGGTACACCGATGAAGAAGACGACGGTGCGGTGGACGTGAA
GGCTGTCGGCGAGATGAGAAGAGCGGTTGATTTGAAAGAGATGAAAGATT
TGAAGGATTTTGTACTGTTGAAGCAGCCTAGGCTTTCTGTTGTTCCAGTT
CCTGACCTAATTTGGGATTGTATATGTGATTTGGGTGGCGGTTATCATGG
TGATGGGAATGATGACGATGAATCAGACCCTAACAATTGAATTTATTAAT
TGTAAATTAATTAAGTAGC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR002740EVE_domain
IPR015947PUA-like_sf