EX570978

EST Overview
NameEX570978
Unique NameEX570978
TypeEST
OrganismPisum sativum (pea)
Sequence length459
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of EX570978 vs. TrEMBL
Match: A5BZY2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007401 PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.225e-15
Identity = 38/44 (86.36%), Postives = 43/44 (97.73%), Query Frame = 1
Query:   73 MVDENGEPLTPTSAWRAAEMLAKMAMVKKSLNKVSDLHGFENAR 204
            +VDENGEPLTPTSAWRAAE LAK+AM++KS+NKVSDLHGFENAR
Sbjct:  713 LVDENGEPLTPTSAWRAAEKLAKVAMMRKSMNKVSDLHGFENAR 756          
BLAST of EX570978 vs. TrEMBL
Match: B9R6Q1_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_1583660 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.505e-14
Identity = 37/44 (84.09%), Postives = 43/44 (97.73%), Query Frame = 1
Query:   73 MVDENGEPLTPTSAWRAAEMLAKMAMVKKSLNKVSDLHGFENAR 204
            ++DENGEPLTP+SAWRAAE LAK+A++KKSLNKVSDLHGFENAR
Sbjct:  723 VIDENGEPLTPSSAWRAAEKLAKVAIMKKSLNKVSDLHGFENAR 766          
BLAST of EX570978 vs. TrEMBL
Match: B9GN58_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_410406 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.020e-13
Identity = 37/43 (86.05%), Postives = 41/43 (95.35%), Query Frame = 1
Query:   76 VDENGEPLTPTSAWRAAEMLAKMAMVKKSLNKVSDLHGFENAR 204
            +DENGEPLTPTSAWRAAE LAK+A +KKSLN+VSDLHGFENAR
Sbjct:  662 MDENGEPLTPTSAWRAAEKLAKVATMKKSLNRVSDLHGFENAR 704          
BLAST of EX570978 vs. TrEMBL
Match: D7SSI6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_205.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003713001 PE=4 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.611e-13
Identity = 35/43 (81.40%), Postives = 41/43 (95.35%), Query Frame = 1
Query:   76 VDENGEPLTPTSAWRAAEMLAKMAMVKKSLNKVSDLHGFENAR 204
            +DE GEPLTPTSAWRAAE LAK+A+++KSLN+VSDLHGFENAR
Sbjct:  613 LDEKGEPLTPTSAWRAAERLAKVAIMRKSLNRVSDLHGFENAR 655          
BLAST of EX570978 vs. TrEMBL
Match: Q7XTB9_ORYSJ (OSJNBa0068L06.4 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0068L06.4 PE=4 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.127e-11
Identity = 32/39 (82.05%), Postives = 38/39 (97.44%), Query Frame = 1
Query:   88 GEPLTPTSAWRAAEMLAKMAMVKKSLNKVSDLHGFENAR 204
            GEPLTPTSAWRAAE LAK+A+++KS+N+VSDLHGFENAR
Sbjct:  685 GEPLTPTSAWRAAEQLAKVAIMRKSMNRVSDLHGFENAR 723          
BLAST of EX570978 vs. TrEMBL
Match: Q6MWF9_ORYSJ (B1160F02.17 protein OS=Oryza sativa subsp. japonica GN=B1160F02.17 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.127e-11
Identity = 32/39 (82.05%), Postives = 38/39 (97.44%), Query Frame = 1
Query:   88 GEPLTPTSAWRAAEMLAKMAMVKKSLNKVSDLHGFENAR 204
            GEPLTPTSAWRAAE LAK+A+++KS+N+VSDLHGFENAR
Sbjct:  604 GEPLTPTSAWRAAEQLAKVAIMRKSMNRVSDLHGFENAR 642          
BLAST of EX570978 vs. TrEMBL
Match: Q25AL0_ORYSA (H0102C09.6 protein OS=Oryza sativa GN=H0102C09.6 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.127e-11
Identity = 32/39 (82.05%), Postives = 38/39 (97.44%), Query Frame = 1
Query:   88 GEPLTPTSAWRAAEMLAKMAMVKKSLNKVSDLHGFENAR 204
            GEPLTPTSAWRAAE LAK+A+++KS+N+VSDLHGFENAR
Sbjct:  650 GEPLTPTSAWRAAEQLAKVAIMRKSMNRVSDLHGFENAR 688          
BLAST of EX570978 vs. TrEMBL
Match: Q0JFI0_ORYSJ (Os04g0101800 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os04g0101800 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.127e-11
Identity = 32/39 (82.05%), Postives = 38/39 (97.44%), Query Frame = 1
Query:   88 GEPLTPTSAWRAAEMLAKMAMVKKSLNKVSDLHGFENAR 204
            GEPLTPTSAWRAAE LAK+A+++KS+N+VSDLHGFENAR
Sbjct:  564 GEPLTPTSAWRAAEQLAKVAIMRKSMNRVSDLHGFENAR 602          
BLAST of EX570978 vs. TrEMBL
Match: C5YB80_SORBI (Putative uncharacterized protein Sb06g000280 OS=Sorghum bicolor GN=Sb06g000280 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.127e-11
Identity = 32/39 (82.05%), Postives = 38/39 (97.44%), Query Frame = 1
Query:   88 GEPLTPTSAWRAAEMLAKMAMVKKSLNKVSDLHGFENAR 204
            GEPLTPTSAWRAAE LAK+A+++KS+N+VSDLHGFENAR
Sbjct:  681 GEPLTPTSAWRAAEQLAKVAIMRKSMNRVSDLHGFENAR 719          
BLAST of EX570978 vs. TrEMBL
Match: B9FD01_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_13494 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.127e-11
Identity = 32/39 (82.05%), Postives = 38/39 (97.44%), Query Frame = 1
Query:   88 GEPLTPTSAWRAAEMLAKMAMVKKSLNKVSDLHGFENAR 204
            GEPLTPTSAWRAAE LAK+A+++KS+N+VSDLHGFENAR
Sbjct:  618 GEPLTPTSAWRAAEQLAKVAIMRKSMNRVSDLHGFENAR 656          
BLAST of EX570978 vs. TAIR peptide
Match: AT4G37890.2 (| Symbols: EDA40 | Zinc finger (C3HC4-type RING finger) family protein | chr4:17812812-17815031 REVERSE LENGTH=711)

HSP 1 Score: 68.5514 bits (166), Expect = 1.759e-12
Identity = 31/43 (72.09%), Postives = 38/43 (88.37%), Query Frame = 1
Query:   76 VDENGEPLTPTSAWRAAEMLAKMAMVKKSLNKVSDLHGFENAR 204
            V +  EPLTPTSAWRAAE LAK+A+++K +N+VSDLHGFENAR
Sbjct:  668 VVQKSEPLTPTSAWRAAERLAKVAIMRKHMNRVSDLHGFENAR 710          
BLAST of EX570978 vs. TAIR peptide
Match: AT4G37890.1 (| Symbols: EDA40 | Zinc finger (C3HC4-type RING finger) family protein | chr4:17812812-17815031 REVERSE LENGTH=739)

HSP 1 Score: 68.5514 bits (166), Expect = 1.759e-12
Identity = 31/43 (72.09%), Postives = 38/43 (88.37%), Query Frame = 1
Query:   76 VDENGEPLTPTSAWRAAEMLAKMAMVKKSLNKVSDLHGFENAR 204
            V +  EPLTPTSAWRAAE LAK+A+++K +N+VSDLHGFENAR
Sbjct:  696 VVQKSEPLTPTSAWRAAERLAKVAIMRKHMNRVSDLHGFENAR 738          
BLAST of EX570978 vs. TAIR peptide
Match: AT5G49665.1 (| Symbols: | Zinc finger (C3HC4-type RING finger) family protein | chr5:20167119-20169420 REVERSE LENGTH=740)

HSP 1 Score: 67.3958 bits (163), Expect = 3.919e-12
Identity = 33/44 (75.00%), Postives = 37/44 (84.09%), Query Frame = 1
Query:   73 MVDENGEPLTPTSAWRAAEMLAKMAMVKKSLNKVSDLHGFENAR 204
            ++DENGEPLTP SAWRAAE LAK+AM+KK     SDLHGFENAR
Sbjct:  701 LMDENGEPLTPASAWRAAEKLAKLAMMKK-----SDLHGFENAR 739          
BLAST of EX570978 vs. TAIR peptide
Match: AT2G22680.1 (| Symbols: | Zinc finger (C3HC4-type RING finger) family protein | chr2:9645433-9647484 FORWARD LENGTH=683)

HSP 1 Score: 66.6254 bits (161), Expect = 6.685e-12
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 1
Query:   82 ENGEPLTPTSAWRAAEMLAKMAMVKKSLNKVSDLHGFENAR 204
            E+ E LTPTSAW+AAE LAK+AMV+K +N+VSDLHGFENAR
Sbjct:  642 ESLESLTPTSAWKAAERLAKVAMVRKHMNRVSDLHGFENAR 682          
BLAST of EX570978 vs. TAIR peptide
Match: AT5G65683.1 (| Symbols: | Zinc finger (C3HC4-type RING finger) family protein | chr5:26261472-26263704 FORWARD LENGTH=717)

HSP 1 Score: 64.6994 bits (156), Expect = 2.540e-11
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 1
Query:   70 NMVDENGEPLTPTSAWRAAEMLAKMAMVKKSLNKVSDLHGFENAR 204
            N  ++  E LTPTSAWRAAE LAK+A+++K LN+VSD+HG ENAR
Sbjct:  672 NRTEDKPEQLTPTSAWRAAEKLAKVAIMRKHLNRVSDMHGLENAR 716          
The following BLAST results are available for this feature:
BLAST of EX570978 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A5BZY2_VITVI9.225e-1586.36Putative uncharacterized protein OS=Vitis vinifera... [more]
B9R6Q1_RICCO3.505e-1484.09Protein binding protein, putative OS=Ricinus commu... [more]
B9GN58_POPTR1.020e-1386.05Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7SSI6_VITVI6.611e-1381.40Whole genome shotgun sequence of line PN40024, sca... [more]
Q7XTB9_ORYSJ2.127e-1182.05OSJNBa0068L06.4 protein OS=Oryza sativa subsp. jap... [more]
Q6MWF9_ORYSJ2.127e-1182.05B1160F02.17 protein OS=Oryza sativa subsp. japonic... [more]
Q25AL0_ORYSA2.127e-1182.05H0102C09.6 protein OS=Oryza sativa GN=H0102C09.6 P... [more]
Q0JFI0_ORYSJ2.127e-1182.05Os04g0101800 protein (Fragment) OS=Oryza sativa su... [more]
C5YB80_SORBI2.127e-1182.05Putative uncharacterized protein Sb06g000280 OS=So... [more]
B9FD01_ORYSJ2.127e-1182.05Putative uncharacterized protein OS=Oryza sativa s... [more]
back to top
BLAST of EX570978 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G37890.21.759e-1272.09| Symbols: EDA40 | Zinc finger (C3HC4-type RING fi... [more]
AT4G37890.11.759e-1272.09| Symbols: EDA40 | Zinc finger (C3HC4-type RING fi... [more]
AT5G49665.13.919e-1275.00| Symbols: | Zinc finger (C3HC4-type RING finger)... [more]
AT2G22680.16.685e-1275.61| Symbols: | Zinc finger (C3HC4-type RING finger)... [more]
AT5G65683.12.540e-1164.44| Symbols: | Zinc finger (C3HC4-type RING finger)... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..19
score
NoneNo IPR availableSEGsegsegcoord: 7..24
score: NAcoord: 32..58
score
NoneNo IPR availableSEGsegsegcoord: 48..57
score
NoneNo IPR availableSEGsegsegcoord: 20..30
score: NAcoord: 39..57
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570978 ID=EX570978; Name=EX570978; organism=Pisum sativum; type=EST; length=459bp
GTTCATGTTGAGGCTCAGCAGCAACAAGTGATGCAAAGAAGAAGAGGAGT
TGAAAGAGATATGAATAATAATATGGTGGATGAAAATGGTGAGCCGCTTA
CACCTACATCGGCTTGGAGAGCGGCTGAGATGCTGGCTAAGATGGCTATG
GTCAAGAAGTCTTTGAATAAAGTCAGCGATTTACACGGCTTCGAAAATGC
TAGGTTTTAATTTTATTTTTTTTGGTTTAGCAAATTTATTTTCTTTTTTT
AATTTTGAAAATTATGTAAATTTGAGGGGAAGAAAACAATTGGGAATGGA
AATGGAGACAAAGTGGTAGCAAACGGCGCGGCCCTTTGTGCATAAGAAGA
TGGGAGTGTATGGCCCACTTTAAAATGGGAGAATTTGATTGGTTGTTGAT
CATATCTTTTTGTCTTCTCTTTTATATATATTGTTATCAATTTTAATTAT
TTCCTTTTG
back to top