GH720603

EST Overview
NameGH720603
Unique NameGH720603
TypeEST
OrganismPisum sativum (pea)
Sequence length513
Libraries
Library NameType
LIBEST_024272 BACIcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Pisum sativum unigene v22011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins2011-04-21
InterProScan analysis for Pisum sativum unigene v22011-04-27
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
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BLAST of GH720603 vs. Medicago proteins
Match: IMGA|Medtr2g036290.1 (Narbonin (AHRD V1 ***- Q08884_VICNA); contains Interpro domain(s) IPR001223 Glycoside hydrolase, family 18, catalytic domain chr02_pseudomolecule_IMGAG_V3.5 13124467-13125748 E EGN_Mt100125 20100825)

HSP 1 Score: 60.8474 bits (146), Expect = 4.092e-10
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:   13 LLPGVSTNTTSPLPMTTDIFVKGCTMLLKTASLPGVFVWDANTSS 147
            LLPGVST+  S   MT D+F+KGC  LL++ SLPG+FVW+AN S+
Sbjct:  242 LLPGVSTDPDSNTNMTRDVFIKGCKSLLESESLPGIFVWNANDSA 286
[Close]
BLAST of GH720603 vs. Medicago proteins
Match: IMGA|Medtr2g036260.1 (Narbonin (AHRD V1 ***- Q08884_VICNA); contains Interpro domain(s) IPR001223 Glycoside hydrolase, family 18, catalytic domain chr02_pseudomolecule_IMGAG_V3.5 13111939-13113270 E EGN_Mt100125 20100825)

HSP 1 Score: 60.8474 bits (146), Expect = 4.092e-10
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:   13 LLPGVSTNTTSPLPMTTDIFVKGCTMLLKTASLPGVFVWDANTSS 147
            LLPGVST+  S   MT D+F+KGC  LL++ SLPG+FVW+AN S+
Sbjct:  242 LLPGVSTDPDSNTNMTRDVFIKGCKSLLESESLPGIFVWNANDSA 286
[Close]
BLAST of GH720603 vs. Medicago proteins
Match: IMGA|Medtr2g036240.1 (Narbonin (AHRD V1 ***- Q08884_VICNA); contains Interpro domain(s) IPR001223 Glycoside hydrolase, family 18, catalytic domain chr02_pseudomolecule_IMGAG_V3.5 13099414-13100681 E EGN_Mt100125 20100825)

HSP 1 Score: 60.8474 bits (146), Expect = 4.092e-10
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:   13 LLPGVSTNTTSPLPMTTDIFVKGCTMLLKTASLPGVFVWDANTSS 147
            LLPGVST+  S   MT D+F+KGC  LL++ SLPG+FVW+AN S+
Sbjct:  242 LLPGVSTDPDSNTNMTRDVFIKGCKSLLESESLPGIFVWNANDSA 286
[Close]
BLAST of GH720603 vs. Medicago proteins
Match: IMGA|AC229724_1028.1 (Narbonin (AHRD V1 ***- Q08884_VICNA); contains Interpro domain(s) IPR001223 Glycoside hydrolase, family 18, catalytic domain AC229724.12 93039-91788 F EGN_Mt100125 20100825)

HSP 1 Score: 60.8474 bits (146), Expect = 4.092e-10
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 1 
Query:   13 LLPGVSTNTTSPLPMTTDIFVKGCTMLLKTASLPGVFVWDANTSS 147
            LLPGVST+  S   MT D+F+KGC  LL++ SLPG+FVW+AN S+
Sbjct:  242 LLPGVSTDPDSNTNMTRDVFIKGCKSLLESESLPGIFVWNANDSA 286
The following BLAST results are available for this feature:
BLAST of GH720603 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 4
Match NameE-valueIdentityDescription
IMGA|Medtr2g036290.14.092e-1060.00Narbonin (AHRD V1 ***- Q08884_VICNA); contains Int... [more]
IMGA|Medtr2g036260.14.092e-1060.00Narbonin (AHRD V1 ***- Q08884_VICNA); contains Int... [more]
IMGA|Medtr2g036240.14.092e-1060.00Narbonin (AHRD V1 ***- Q08884_VICNA); contains Int... [more]
IMGA|AC229724_1028.14.092e-1060.00Narbonin (AHRD V1 ***- Q08884_VICNA); contains Int... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 44..49
score

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 44..49
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GH720603 ID=GH720603; Name=GH720603; organism=Pisum sativum; type=EST; length=513bp
CCGGGCAGGTAACTCTTGCCAGGAGTCAGCACCAATACAACTAGTCCTCT
TCCAATGACAACTGATATCTTTGTTAAGGGATGCACAATGCTCCTTAAAA
CTGCATCACTTCCGGGAGTTTTTGTGTGGGATGCTAATACCTCTTCTCCC
GCATATTCACTTGAGGGAGAGCTTCAAGACCTCCTCACTAAACAGTGATT
GCTTACTGGTAATTTTGCAGGTCATACATACTATAAATAATAGCAAGGCC
TTATGAGTCATGCTATGTATAGTATGTCACATATCCTAAATAAGACCTAT
CATTCACCAGGGTGCTCTTTTTACTGCTTATATGTTTGTTTCTTACACTT
TTCTCCCTGTTTTCTTTAAGTGTTATGTTATGTTGTAAGATATGAATTGC
TTCTTTTGTATGTATCCTGAACTATCTGTAATATCTTGGTATCAAGTTAA
TAATAAGAAGCAAATATTATTGTTTTCTATTTCTCTAAAAAAAAACCTCG
GCCGCGACCACGC
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