GH720838
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GH720838 vs. TrEMBL
Match: Q2HS28_MEDTR (Transcription factor IIA, helical OS=Medicago truncatula GN=MtrDRAFT_AC157503g33v2 PE=4 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 1.413e-45 Identity = 91/116 (78.45%), Postives = 97/116 (83.62%), Query Frame = 3 Query: 36 TPNYNIPTGPSDYSSSGNETGGNADVKGGRPSPFMQPPSPWMN--QRPPLDVNVSYVEGREEADRGASNQPMTQDFFTVPGGKRKRNDMPPPYDVGGYIPQQXXXXXXXXXXFEIE 377 TPNYNIPTGPSDYSS GN+ GGNADVKGGR + FM PPSPWMN QRPPLDVNV+YVEGR+EADRGASNQPMTQDFFT+ GGKRKRND+PPPYD GGYIPQQ FEIE Sbjct: 117 TPNYNIPTGPSDYSS-GNDAGGNADVKGGRQA-FMPPPSPWMNMNQRPPLDVNVAYVEGRDEADRGASNQPMTQDFFTMTGGKRKRNDLPPPYDAGGYIPQQDGAGDAVSGDFEIE 230
BLAST of GH720838 vs. TrEMBL
Match: B9S3E9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0733160 PE=4 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 5.026e-43 Identity = 95/174 (54.60%), Postives = 113/174 (64.94%), Query Frame = 3 Query: 45 YNIPTGP-SDYSSSGNETGGNADVKGGRPSPFMQPPSPWMNQRPPLDVNVSYVEGREEADRGASNQPMTQDFFTVPGGKRKRNDMPPPYDVGGYIPQQXXXXXXXXXXFEIEVCGGSISFSSQHTNSKGKMPADLERLTS------RIPQLDGPIPYE-DDVLSTPNIYYNGGV 542 YNIPTGP S+Y + +++GG+ + K GRPSP+MQPPSPW+NQRPPLDVN++YVEGREEADRG SNQP+TQDFFT GKRKR D Y+ GG+IPQQ G F + AD+E L+S +IPQLDGPIP DDVLSTPNIY GV Sbjct: 120 YNIPTGPTSEYPTPVSDSGGSTEAKAGRPSPYMQPPSPWINQRPPLDVNIAYVEGREEADRGTSNQPLTQDFFTGASGKRKREDFAAQYNNGGFIPQQDG--------------AGDTPFEVLQVERDTVISADIEILSSVTRRGLKIPQLDGPIPDPYDDVLSTPNIYNYQGV 279
BLAST of GH720838 vs. TrEMBL
Match: D7SKA9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024907001 PE=4 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.788e-40 Identity = 93/172 (54.07%), Postives = 109/172 (63.37%), Query Frame = 3 Query: 45 YNIPTGPSDYSSSGNETGGNADVKGGRPSPFMQPPSPWMNQRPPL--DVNVSYVEGREEADRGASNQPMTQDFFTVPGGKRKRNDMPPPYDVGGYIPQQXXXXXXXXXXFEIEVCGGSISFSSQH--TNSKGKMPADLERLTSRIPQLDGPI--PYEDDVLSTPNIYYNGGV 542 YNIPTGP++Y ++ + GG D+K GRP +M PPSPWM QRPPL DVNV+YVEGR+E DRG S QP+TQDFF + GKRKR D P Y GYIPQQ FE+EV GS S T + ++ + RIPQLDGPI PYE DVLSTPNIY GV Sbjct: 121 YNIPTGPTEYPAA-QDGGGATDMKSGRPPSYMPPPSPWMQQRPPLSVDVNVAYVEGRDEGDRGNSQQPLTQDFFMMSSGKRKREDFPSQYHTSGYIPQQDGAGDPAPEVFEVEVSQGSNSIKGHDILTKANREIFPQVAGSYVRIPQLDGPIPDPYE-DVLSTPNIYNYQGV 290
BLAST of GH720838 vs. TrEMBL
Match: B9GJ87_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_706098 PE=4 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.159e-33 Identity = 86/180 (47.78%), Postives = 106/180 (58.89%), Query Frame = 3 Query: 45 YNIPTGPS-DYSSSGNETGGNADVKGGRPSPFMQPPSPWMNQRPPLDVN------------VSYVEGREEADRGASNQPMTQDFFTVPGGKRKRNDMPPPYDVGGYIPQQXXXXXXXXXXFEIEVCGGSISFSSQHTNSKGKMPADLERLTSRIPQLDGPIPYE-DDVLSTPNIYYNGGV 542 YNI TG S DY + ++ GG+ DVK GRPS FMQ PSP M+QRPPLDVN V+YVEGR+E DRG S+Q +TQDFF + GKRKR D P Y+ GG+IPQQ ++E T ++ A + R +IPQ+DGPIP DD+LSTPNIY GV Sbjct: 135 YNISTGSSSDYPTPVSDAGGSTDVKAGRPSHFMQSPSPLMHQRPPLDVNVGKVLTNKCCAFVAYVEGRDEVDRGGSHQTLTQDFF-MSSGKRKRGDFAPKYNNGGFIPQQDGAVDSASEVSQVE--------CDTITTKNREILARVSRSYVKIPQVDGPIPDPYDDMLSTPNIYNYQGV 305
BLAST of GH720838 vs. TrEMBL
Match: Q93VP4_ARATH (At1g07470/F22G5_13 OS=Arabidopsis thaliana GN=At1g07470 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.043e-33 Identity = 84/166 (50.60%), Postives = 100/166 (60.24%), Query Frame = 3 Query: 45 YNIPTGPSDYSSSGNETGGNADVKGGRPSPFMQPPSPWMNQRPPLDVNVSYVEGREEADRGASNQPMTQDFFTVPGGKRKRNDMPPPYDVGGYIPQQXXXXXXXXXXFEIEVCGGSISFSSQHTNSKGKMPADLERLTSRIPQLDGPIPYE-DDVLSTPNIY-YNG 536 YNIPTG SDY + G E G N DVK RPSP+M PPSPW N P LDVNV+YV+GR+E +RG SNQ TQD F GKRKR+D Y GG IPQQ E I++ K+P DL +S+IPQ+DGP+P D++LSTPNIY Y G Sbjct: 118 YNIPTGSSDYPTPGTENGVNIDVKA-RPSPYMPPPSPWTN--PRLDVNVAYVDGRDEPERGNSNQQFTQDLFVPSSGKRKRDDSSAHYQNGGSIPQQDGASDAIPEA-NFECAALRITYVGDR-----KIPRDLIGSSSKIPQVDGPMPDPYDEMLSTPNIYSYQG 274
BLAST of GH720838 vs. TrEMBL
Match: D7KH29_ARALY (Transcription factor IIA large subunit OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470774 PE=4 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.372e-32 Identity = 84/168 (50.00%), Postives = 102/168 (60.71%), Query Frame = 3 Query: 45 YNIPTGPSDYSSSGNETGGNADVKGGRPSPFMQPPSPWMNQRPPLDVNVSYVEGREEADRGASNQPMTQDFFTVPGGKRKRNDMPPPYDVGGYIPQQXXXXXXXXXXFEIEVCGGSISFSSQHTNSKG--KMPADLERLTSRIPQLDGPIPYE-DDVLSTPNIY-YNG 536 YNIPTG SDY++ G E G N DVKG RPSP+M PPSPW N P LDVNV+YV+GR+E +RG SNQ TQD F GKRKR+D Y GG IPQQ + + + S G K+P D +S+IPQ+DGP+P D++LSTPNIY Y G Sbjct: 118 YNIPTGSSDYTTPGTENGVNLDVKG-RPSPYMPPPSPWAN--PRLDVNVAYVDGRDEPERGNSNQQFTQDLFVPSSGKRKRDDSSGHYQNGGSIPQQDGASD--------TIPKANFECYALRITSVGDRKVPRDFFCSSSKIPQVDGPMPDPYDEMLSTPNIYSYQG 274
BLAST of GH720838 vs. TrEMBL
Match: O49349_ARATH (AT1G07480 protein OS=Arabidopsis thaliana GN=TFIIA-L PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.214e-32 Identity = 84/167 (50.30%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 45 YNIPTGPSDYSSSGNETGGNADVKGGRPSPFMQPPSPWMNQRPPLDVNVSYVEGREEADRGASNQPMTQDFFTVPGGKRKRNDMPPPYDVGGYIPQQ-XXXXXXXXXXFEIEVCGGSISFSSQHTNSKGKMPADLERLTSRIPQLDGPIPYE-DDVLSTPNIY-YNG 536 YNIPTG SDY + G E G N DVK RPSP+M PPSPW N P LDVNV+YV+GR+E +RG SNQ TQD F GKRKR+D Y GG IPQQ FE + +F + K+P D +S+IPQ+DGP+P D++LSTPNIY Y G Sbjct: 118 YNIPTGSSDYPTPGTENGVNIDVKA-RPSPYMPPPSPWTN--PRLDVNVAYVDGRDEPERGNSNQQFTQDLFVPSSGKRKRDDSSGHYQNGGSIPQQDGAGDAIPEANFECD------AFRITSIGDR-KVPRDFFSSSSKIPQVDGPMPDPYDEMLSTPNIYSYQG 274
BLAST of GH720838 vs. TrEMBL
Match: Q9LNX1_ARATH (F22G5.14 OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.981e-31 Identity = 83/173 (47.98%), Postives = 100/173 (57.80%), Query Frame = 3 Query: 45 YNIPTGPSDYSSSGNETGGNADVKGGRPSPFMQPPSPWMNQRPPLDVNVSYVEGREEADRGASNQPMTQDFFTVPGGKRKRNDMPPPYDVGGYIPQQXXXXXXXXXXFE-----IEVCGGSISFSSQHTNSKG--KMPADLERLTSRIPQLDGPIPYE-DDVLSTPNIY-YNG 536 YNIPTG SDY + G E G N DVK RPSP+M PPSPW N P LDVNV+YV+GR+E +RG SNQ TQD F GKRKR+D Y GG IPQQ + + + S G K+P D +S+IPQ+DGP+P D++LSTPNIY Y G Sbjct: 118 YNIPTGSSDYPTPGTENGVNIDVKA-RPSPYMPPPSPWTN--PRLDVNVAYVDGRDEPERGNSNQQFTQDLFVPSSGKRKRDDSSGHYQNGGSIPQQDGAGDAIPEYLVDTPDWSTILQANFECDAFRITSIGDRKVPRDFFSSSSKIPQVDGPMPDPYDEMLSTPNIYSYQG 287
BLAST of GH720838 vs. TrEMBL
Match: A5C3D6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039114 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.832e-31 Identity = 65/113 (57.52%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 45 YNIPTGPSDYSSSGNETGGNADVKGGRPSPFMQPPSPWMNQRPPL--DVNVSYVEGREEADRGASNQPMTQDFFTVPGGKRKRNDMPPPYDVGGYIPQQXXXXXXXXXXFEIE 377 YNIPTGP++Y ++ + GG D+K GRP +M PPSPWM QRPPL DVNV+YVEGR+E DRG S QP+TQDFF + GKRKR D P Y GYIPQQ FE+E Sbjct: 121 YNIPTGPTEYPAA-QDGGGATDMKSGRPPSYMPPPSPWMQQRPPLSVDVNVAYVEGRDEGDRGNSQQPLTQDFFMMSSGKRKREDFPSQYHTSGYIPQQDGAGDPAPEVFEVE 232
BLAST of GH720838 vs. TrEMBL
Match: B9HPD1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_876038 PE=4 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.420e-29 Identity = 80/174 (45.98%), Postives = 102/174 (58.62%), Query Frame = 3 Query: 45 YNIPTGPSDYSSSGNETGGNADVKGGRPSPFM-------QPPSPWMNQRPPLDVNVSYVEGREEADRGASNQPMTQDFFTVPGGKRKRNDMPPPYDVGGYIPQQXXXXXXXXXXFEIEVCGGSISFSSQHTNSKGKMPADLERLTSRIPQLDGPIPYE-DDVLSTPNIYYNGGV 542 YNIPTG SDY + ++ GG+ D K GRPSPFM QP N+ V+YVEGR+E DRG S+Q +TQDFF +P GKRKR D P Y+ GG+IPQQ ++E ++ +S T ++ A + R +IPQ+DGPIP DDVLSTPNIY GV Sbjct: 131 YNIPTGSSDYPTPVSDAGGSTDGKAGRPSPFMVSTDLIFQPSLVLTNK---CCAFVAYVEGRDEVDRGTSHQALTQDFF-MPSGKRKREDFAPKYNNGGFIPQQDGAGDSASEVSQVE-----LNVNSYFTTKNKEILARVSRSYLKIPQVDGPIPDPYDDVLSTPNIYNYQGV 295
BLAST of GH720838 vs. TAIR peptide
Match: AT1G07470.1 (| Symbols: | Transcription factor IIA, alpha/beta subunit | chr1:2291723-2294350 FORWARD LENGTH=375) HSP 1 Score: 143.665 bits (361), Expect = 6.449e-35 Identity = 84/166 (50.60%), Postives = 100/166 (60.24%), Query Frame = 3 Query: 45 YNIPTGPSDYSSSGNETGGNADVKGGRPSPFMQPPSPWMNQRPPLDVNVSYVEGREEADRGASNQPMTQDFFTVPGGKRKRNDMPPPYDVGGYIPQQXXXXXXXXXXFEIEVCGGSISFSSQHTNSKGKMPADLERLTSRIPQLDGPIPYE-DDVLSTPNIY-YNG 536 YNIPTG SDY + G E G N DVK RPSP+M PPSPW N P LDVNV+YV+GR+E +RG SNQ TQD F GKRKR+D Y GG IPQQ E I++ K+P DL +S+IPQ+DGP+P D++LSTPNIY Y G Sbjct: 118 YNIPTGSSDYPTPGTENGVNIDVKA-RPSPYMPPPSPWTN--PRLDVNVAYVDGRDEPERGNSNQQFTQDLFVPSSGKRKRDDSSAHYQNGGSIPQQDGASDAIPEA-NFECAALRITYVGDR-----KIPRDLIGSSSKIPQVDGPMPDPYDEMLSTPNIYSYQG 274
BLAST of GH720838 vs. TAIR peptide
Match: AT1G07480.2 (| Symbols: | Transcription factor IIA, alpha/beta subunit | chr1:2296706-2299215 REVERSE LENGTH=375) HSP 1 Score: 140.969 bits (354), Expect = 4.180e-34 Identity = 84/167 (50.30%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 45 YNIPTGPSDYSSSGNETGGNADVKGGRPSPFMQPPSPWMNQRPPLDVNVSYVEGREEADRGASNQPMTQDFFTVPGGKRKRNDMPPPYDVGGYIPQQ-XXXXXXXXXXFEIEVCGGSISFSSQHTNSKGKMPADLERLTSRIPQLDGPIPYE-DDVLSTPNIY-YNG 536 YNIPTG SDY + G E G N DVK RPSP+M PPSPW N P LDVNV+YV+GR+E +RG SNQ TQD F GKRKR+D Y GG IPQQ FE + +F + K+P D +S+IPQ+DGP+P D++LSTPNIY Y G Sbjct: 118 YNIPTGSSDYPTPGTENGVNIDVKA-RPSPYMPPPSPWTN--PRLDVNVAYVDGRDEPERGNSNQQFTQDLFVPSSGKRKRDDSSGHYQNGGSIPQQDGAGDAIPEANFECD------AFRITSIGDR-KVPRDFFSSSSKIPQVDGPMPDPYDEMLSTPNIYSYQG 274
BLAST of GH720838 vs. TAIR peptide
Match: AT1G07480.1 (| Symbols: | Transcription factor IIA, alpha/beta subunit | chr1:2296706-2299215 REVERSE LENGTH=375) HSP 1 Score: 140.969 bits (354), Expect = 4.180e-34 Identity = 84/167 (50.30%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 45 YNIPTGPSDYSSSGNETGGNADVKGGRPSPFMQPPSPWMNQRPPLDVNVSYVEGREEADRGASNQPMTQDFFTVPGGKRKRNDMPPPYDVGGYIPQQ-XXXXXXXXXXFEIEVCGGSISFSSQHTNSKGKMPADLERLTSRIPQLDGPIPYE-DDVLSTPNIY-YNG 536 YNIPTG SDY + G E G N DVK RPSP+M PPSPW N P LDVNV+YV+GR+E +RG SNQ TQD F GKRKR+D Y GG IPQQ FE + +F + K+P D +S+IPQ+DGP+P D++LSTPNIY Y G Sbjct: 118 YNIPTGSSDYPTPGTENGVNIDVKA-RPSPYMPPPSPWTN--PRLDVNVAYVDGRDEPERGNSNQQFTQDLFVPSSGKRKRDDSSGHYQNGGSIPQQDGAGDAIPEANFECD------AFRITSIGDR-KVPRDFFSSSSKIPQVDGPMPDPYDEMLSTPNIYSYQG 274 The following BLAST results are available for this feature:
BLAST of GH720838 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of GH720838 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GH720838 ID=GH720838; Name=GH720838; organism=Pisum sativum; type=EST; length=562bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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