GH720939
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GH720939 vs. TrEMBL
Match: D7TM64_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_19.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016236001 PE=4 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.495e-43 Identity = 98/204 (48.04%), Postives = 124/204 (60.78%), Query Frame = 3 Query: 27 SNHLDT--ALRGQRDGQNLDALGNQVGSEFNSATVDLLDPRIIQCLQQXXXXXXXXXXXXXXPFQMRNFSDASHGDIEGLRKAYLETLITQQKQLCELPLLSKSGLLNHGLFGSQPYGLGMPHSGKQMANSSLPSFGSGNPLFENERISHMNXXXXXXXXXXXXXWHADIGNNMEARFASSLLDEFKNNKAKPFELSDITDHAV 632 +NH D+ AL G DGQ+L GN V S+ +S ++P + +Q P +RNF SHGD+ GL+KAYLETL+ QQKQ ELPLL KSG LN G +G+ YGLGM + G MANS+LPS GSGNP+F+N++IS WH D +NME RFAS+LL+EFKNNK + FELSDI DH + Sbjct: 499 NNHNDSGPALSGSGDGQSLSRSGNWVSSDLHS----YMEPHGVHYMQGTSDYATRTAASQGDPSSVRNFIGTSHGDLLGLQKAYLETLLAQQKQQYELPLLGKSGGLNQGYYGNSSYGLGMAYPGNPMANSALPSVGSGNPMFQNDQISCFTSMMRSSMGGPITSWHTDT-SNMEGRFASTLLEEFKNNKTRSFELSDIVDHVI 697
BLAST of GH720939 vs. TrEMBL
Match: B9SY71_RICCO (Pumilio, putative OS=Ricinus communis GN=RCOM_0481440 PE=4 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 7.185e-38 Identity = 92/203 (45.32%), Postives = 121/203 (59.61%), Query Frame = 3 Query: 30 NHLD--TALRGQRDGQNLDALGNQVGSEFNSATVDLLDPRIIQCLQQXXXXXXXXXXXXXXPFQMRNFSDASHGDIEGLRKAYLETLITQQKQLCELPLLSKSGLLNHGLFGSQPYGLGMPHSGKQMANSSLPSFGSGNPLFENERISHMNXXXXXXXXXXXXXWHADIGNNMEARFASSLLDEFKNNKAKPFELSDITDHAV 632 NHLD +AL G G +L+ G+Q G EF+S ++D R Q L++ Q+RNF SHGD++ ++KAYLE L+ QQ Q E PLL KSG +N G + YGLGMP+ G MANS LPS GSG+ F+NE+++H WH D+G+N+E R+ SSLLDEFKNNK + FELSDI +H V Sbjct: 502 NHLDAGSALGGNGVGHSLNRAGDQAGPEFHS---QVMDSRYAQYLRRTSDYETRTNG------QLRNFFGISHGDLDEVQKAYLEALLAQQNQQYE-PLLVKSGSMNQGYHRNSSYGLGMPYLGTSMANSVLPSVGSGS--FQNEQVAHFTSTVRNSMGGSIGSWHPDVGSNIERRYVSSLLDEFKNNKTRSFELSDIVEHVV 692
BLAST of GH720939 vs. TrEMBL
Match: B9HLI1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_803156 PE=4 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.233e-30 Identity = 85/201 (42.29%), Postives = 107/201 (53.23%), Query Frame = 3 Query: 30 NHLDTALRGQRDGQNLDALGNQVGSEFNSATVDLLDPRIIQCLQQXXXXXXXXXXXXXXPFQMRNFSDASHGDIEGLRKAYLETLITQQKQLCELPLLSKSGLLNHGLFGSQPYGLGMPHSGKQMANSSLPSFGSGNPLFENERISHMNXXXXXXXXXXXXXWHADIGNNMEARFASSLLDEFKNNKAKPFELSDITDHAV 632 NH DT G +G N LGNQVGS+ S LDPR Q LQ+ P +R++ S GD++ ++KAYLETL+ QQKQ ELP+L+KSG LN G + Y L MP+ S LPS GSG F++ R SH+ +DIG N E + +SS +DEFKNNK FELSDI H V Sbjct: 485 NHFDTGGVGIENGFN--RLGNQVGSDLRSP---FLDPRYTQSLQRMLDYATHAVASSSEP-PVRDYFGTSEGDLDRIQKAYLETLLVQQKQQYELPILTKSGGLNQGYHRNSSYNLSMPYPENSAVKSMLPSVGSGG--FQSGRASHLASVMRSSTGGSTGSRQSDIGCNAERKQSSSFIDEFKNNKTGSFELSDIVGHVV 677
BLAST of GH720939 vs. TrEMBL
Match: B9HUI2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_567643 PE=4 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.668e-29 Identity = 84/201 (41.79%), Postives = 107/201 (53.23%), Query Frame = 3 Query: 30 NHLDTALRGQRDGQNLDALGNQVGSEFNSATVDLLDPRIIQCLQQXXXXXXXXXXXXXXPFQMRNFSDASHGDIEGLRKAYLETLITQQKQLCELPLLSKSGLLNHGLFGSQPYGLGMPHSGKQMANSSLPSFGSGNPLFENERISHMNXXXXXXXXXXXXXWHADIGNNMEARFASSLLDEFKNNKAKPFELSDITDHAV 632 NHLD G G + LGNQ GS LDP Q LQ+ P +RN+ AS GD++ ++KAYLETL+ QQKQ ELPLL+KSG LN G + YGL MP+ +A SSLPS GSG+ F++ER +H+ W +DIG+ E R +SS ++ FKNNK FE SDI V Sbjct: 490 NHLDKG--GHGIGHGFNRLGNQAGS---------LDPCYPQYLQRISDYATCPVATSSDP-SVRNYFGASDGDLDRIQKAYLETLLVQQKQQYELPLLTKSGGLNQGYHRNSSYGLSMPYPENSVAKSSLPSVGSGS--FQSERAAHLAPMMRNSIGGSIGSWQSDIGSIAERRPSSSSIEGFKNNKTGSFEPSDIAGQVV 676
BLAST of GH720939 vs. TrEMBL
Match: D7TLR0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_19.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016507001 PE=4 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.110e-25 Identity = 70/190 (36.84%), Postives = 99/190 (52.11%), Query Frame = 3 Query: 69 QNLDALGNQVGSEFNSATVDLLDPRIIQCLQQXXXXXXXXXXXXXXPFQMRNFSDASHGDIEGLRKAYLETLITQQKQLCELPLLSKSGLLNHGLFGSQPYGLGMPHSGKQMANSSLPS--FGSGNPLFENERISHMNXXXXXXXXXXXXXWHADIGNNMEARFASSLLDEFKNNKAKPFELSDITDHAV 632 QNL + G N+ V ++DP +Q L+ P R + +S+ D+ GL+KAYL L+T QK +P L KS +NHG +G+ +GLGM + G +A LP+ GSG+P+ NER WH++ G N++ F SSLLDEFK+NK K FELS+I+ H V Sbjct: 360 QNLRVGNHTTG---NALQVPVVDPLYLQYLRSAEYAATQGVALND-PTMDREYMGSSYMDLLGLQKAYLGALLTSQKSQYGVPYLGKSSSMNHGYYGNPQFGLGMSYPGSPLAGPLLPNSPVGSGSPVRHNERNMRFPSGMRNLAGGVMGAWHSEAGGNLDDNFVSSLLDEFKSNKTKCFELSEISGHVV 545
BLAST of GH720939 vs. TrEMBL
Match: B9SDY1_RICCO (Pumilio, putative OS=Ricinus communis GN=RCOM_1480050 PE=4 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.528e-23 Identity = 69/190 (36.32%), Postives = 98/190 (51.58%), Query Frame = 3 Query: 69 QNLDALGNQVGSEFNSATVDLLDPRIIQCLQQXXXXXXXXXXXXXXPFQMRNFSDASHGDIEGLRKAYLETLITQQKQLCELPLLSKSGLLNHGLFGSQPYGLGMPHSGKQMANSSLPS--FGSGNPLFENERISHMNXXXXXXXXXXXXXWHADIGNNMEARFASSLLDEFKNNKAKPFELSDITDHAV 632 QNL +GNQ S N+ + L+DP +Q ++ P R + S+ D+ L+KAY+ L++ QK +P L KSG +NH +G+ +GLGM +SG + LP+ GSG+P+ NER WH++ G N+ F SSLLDEFK+NK K FELS+I H V Sbjct: 485 QNLSRVGNQNTS--NAFQMPLMDPLYLQYMRSNEYAAAQLAALND-PTMDREYIGNSYMDL--LQKAYIGALLSPQKSQYGVPYLGKSGSMNHNYYGNPAFGLGMSYSGSPIGGPLLPNSPIGSGSPVRHNERNMRFTAGMRNFSGGVMGSWHSETGGNLGEDFPSSLLDEFKSNKTKCFELSEIAGHVV 669
BLAST of GH720939 vs. TrEMBL
Match: B9SDY2_RICCO (Pumilio, putative OS=Ricinus communis GN=RCOM_1480060 PE=4 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.232e-22 Identity = 68/190 (35.79%), Postives = 96/190 (50.53%), Query Frame = 3 Query: 69 QNLDALGNQVGSEFNSATVDLLDPRIIQCLQQXXXXXXXXXXXXXXPFQMRNFSDASHGDIEGLRKAYLETLITQQKQLCELPLLSKSGLLNHGLFGSQPYGLGMPHSGKQMANSSLPS--FGSGNPLFENERISHMNXXXXXXXXXXXXXWHADIGNNMEARFASSLLDEFKNNKAKPFELSDITDHAV 632 QNL +GNQ + N + L+DP +Q ++ P R + S+ D+ L+KAYL L++ QK +P L SG +NH +G+ +GLGM +SG + LPS GSG+P+ +ER WH++ G N+ F SSLLDEFK+NK K FELS+I H V Sbjct: 485 QNLSRVGNQ--NTNNGLQMPLMDPLYLQYMRSNEYAAAQLAALND-PTMDREYLGNSYMDL--LQKAYLGALLSPQKSQYGVPYLGNSGSMNHNYYGNPAFGLGMSYSGSPIGGPLLPSSPIGSGSPVRHSERNMRFTAGMRNLSGGVMGSWHSETGGNLGEDFPSSLLDEFKSNKTKCFELSEIAGHVV 669
BLAST of GH720939 vs. TrEMBL
Match: A5BN72_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024967 PE=4 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.218e-22 Identity = 68/193 (35.23%), Postives = 100/193 (51.81%), Query Frame = 3 Query: 63 DGQNLDALGNQVGSEFNSATVDLLDPRIIQCLQQXXXXXXXXXXXXXXPFQMRNFSDASHGDIEGLRKAYLETLITQQKQLCELPLLSKS-GLLNHGLFGSQPYGLGMPHSGKQMANSSLPS--FGSGNPLFENERISHMNXXXXXXXXXXXXXWHADIGNNMEARFASSLLDEFKNNKAKPFELSDITDHAV 632 + QNL+ +GN + N+ +DP +Q L+ P RN+ S+ D+ GL+KAYL L++ QK +PL SKS G +HG +G+ +G+GM + G +A+ +P+ G G+P+ N+ WH D G NM+ FASSLL+EFK+NK K FELS+I H V Sbjct: 521 ESQNLNRIGNHMAG--NALQAPFVDPMYLQYLRTAEYAAAQVAALND-PSVDRNYLGNSYVDLLGLQKAYLGALLSPQKSQYGVPLGSKSSGSNHHGYYGNPAFGVGMSYPGSPLASPVIPNSPIGPGSPIRHNDLNMRYPSGMRNLAGGVMAPWHLDAGCNMDEGFASSLLEEFKSNKTKCFELSEIAGHVV 710
BLAST of GH720939 vs. TrEMBL
Match: B9HMK2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_563924 PE=4 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.679e-21 Identity = 67/191 (35.08%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 69 QNLDALGNQVGSEFNSATVDLLDPRIIQCLQQXXXXXXXXXXXXXXPFQMRNFSDASHGDI-EGLRKAYLETLITQQKQLCELPLLSKSGLLNHGLFGSQPYGLGMPHSGKQMANSSLPSF--GSGNPLFENERISHMNXXXXXXXXXXXXXWHADIGNNMEARFASSLLDEFKNNKAKPFELSDITDHAV 632 QNL GNQ +A V L+DP +Q L+ G+ + L+K LETL++ Q +P L KSG LNH +G+ +GLGM +SG + LP+ GSG P+ +ER + WH++ G+N++ F SSLLDEFK+NK K FELS+I H V Sbjct: 484 QNLSRFGNQ------TAGVPLVDPLYLQYLRSDEYAAAQLATAQLAALNEPMLDREYVGNAYDLLQKLQLETLLSSQNSQYGVPYLGKSGSLNHNYYGNTGFGLGMSYSGSPLGGPVLPNLLAGSGGPVRHSERNMRFSPGMRNLSGGVMGSWHSEAGSNLDESFPSSLLDEFKSNKTKCFELSEIAGHVV 668
BLAST of GH720939 vs. TrEMBL
Match: B9HTG3_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_227408 PE=4 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.033e-20 Identity = 66/190 (34.74%), Postives = 94/190 (49.47%), Query Frame = 3 Query: 69 QNLDALGNQVGSEFNSATVDLLDPRIIQCLQQXXXXXXXXXXXXXXPFQMRNFSDASHGDIEGLRKAYLETLITQQKQLCELPLLSKSGLLNHGLFGSQPYGLGMPHSGKQMANSSLP--SFGSGNPLFENERISHMNXXXXXXXXXXXXXWHADIGNNMEARFASSLLDEFKNNKAKPFELSDITDHAV 632 QN LGN ++A + L+DP +Q L+ +A + L+K LETL++ QK +P L KSG LNH +G+ +GLGM +SG + LP S GSG PL +ER + WH++ G+N++ F SSLL+EFK+NK + FELS+I H V Sbjct: 442 QNHSRLGN------HTAGLPLVDPLYLQYLRSNEYAAAQLAALNDPMLDREYVGNA----YDLLQKLQLETLMSSQKSQYGVPYLGKSGSLNHNYYGNPGFGLGMSYSGSPLGGPLLPNSSVGSGGPLRHSERNMLFSPAMRNLSGGVMGSWHSEAGSNLDESFPSSLLEEFKSNKTRCFELSEIAGHVV 621
BLAST of GH720939 vs. TAIR peptide
Match: AT3G10360.1 (| Symbols: APUM4, PUM4 | pumilio 4 | chr3:3211276-3215144 REVERSE LENGTH=1003) HSP 1 Score: 62.3882 bits (150), Expect = 2.449e-10 Identity = 61/195 (31.28%), Postives = 80/195 (41.03%), Query Frame = 3 Query: 48 LRGQRDGQNLDALGNQVGSEFNSATVDLLDPRIIQCLQQXXXXXXXXXXXXXXPFQMRNFSDASHGDIEGLRKAYLETLITQQKQLCELPLLSKSGLLNHGLFGSQPYGLGMPHSGKQMANSSLPSFGSGNPLFENERISHMNXXXXXXXXXXXXXWHADIGNNMEARFASSLLDEFKNNKAKPFELSDITDHAV 632 L G D Q+L+ L NQV SE +S ++DP Q L +RN S+GD YL L+ Q +Q L N F S Y LG + G + + PS S N F+N R+S H DIG+ EA SLL+ FKNNK + ELS+I H + Sbjct: 501 LTGDGDRQSLNRLINQVASELHSP---VMDPHYSQYLHTASSTAAPIDHSL-----IRNNFGTSNGDTAN---EYLAMLLAQNRQQ-----LGNLNAANSRFFESPSYDLGNMYLGNHLPS---PSKNSRN--FQNMRMSQSASMMKVPFGGLQGSSHVDIGSTAEA----SLLEGFKNNKTRSLELSEIVGHVI 670
BLAST of GH720939 vs. TAIR peptide
Match: AT2G29200.1 (| Symbols: APUM1, PUM1 | pumilio 1 | chr2:12549483-12553185 REVERSE LENGTH=968) HSP 1 Score: 58.5362 bits (140), Expect = 3.536e-9 Identity = 46/146 (31.51%), Postives = 69/146 (47.26%), Query Frame = 3 Query: 207 PFQMRNF-SDASHGDIEGLRKAYLETLITQQKQLCELPLLSKSGLLN-HGLFGSQPYGLGMPHSGKQMANSSLPS--FGSGNPLFENERISHMNXXXXXXXXXXXXXWHADIGNNMEARFASSLLDEFKNNKAKPFELSDITDHAV 632 P RNF +S+ D+ L++AYL QK +P KSG N H +GS +G M + G +A+ +P+ +P+ +E WH D + + F SS+L+EFK+NK + FELS+I H V Sbjct: 499 PSMDRNFMGGSSYMDMLELQRAYLGA----QKSQYGVPY--KSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRRDEVNMRFPSATRNYSGGLMGSWHMDA--SFDEGFGSSMLEEFKSNKTRGFELSEIAGHVV 636
BLAST of GH720939 vs. TAIR peptide
Match: AT2G29140.1 (| Symbols: APUM3, PUM3 | pumilio 3 | chr2:12531392-12535060 FORWARD LENGTH=964) HSP 1 Score: 56.9954 bits (136), Expect = 1.029e-8 Identity = 44/145 (30.34%), Postives = 69/145 (47.59%), Query Frame = 3 Query: 207 PFQMRNFSDASHGDIEGLRKAYLETLITQQKQLCELPLLSKSGLLN-HGLFGSQPYGLGMPHSGKQMANSSLPS--FGSGNPLFENERISHMNXXXXXXXXXXXXXWHADIGNNMEARFASSLLDEFKNNKAKPFELSDITDHAV 632 P RN+ ++ +E +++AYL + QK LP KSG N H +GS +G M + G +A+ +P+ +P+ E WH D +++ F SS+L+EFK+NK + FELS+I H V Sbjct: 497 PSMDRNYGNSYMNMLE-IQRAYLGS----QKSQYGLPY--KSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRRGEVNMRYPAATRNYTGGVMGSWHMDA--SLDEGFGSSMLEEFKSNKTRGFELSEIAGHVV 632 The following BLAST results are available for this feature:
BLAST of GH720939 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of GH720939 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GH720939 ID=GH720939; Name=GH720939; organism=Pisum sativum; type=EST; length=650bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|