EX570106

EST Overview
NameEX570106
Unique NameEX570106
TypeEST
OrganismPisum sativum (pea)
Sequence length455
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of EX570106 vs. TrEMBL
Match: B9SYL5_RICCO (GTP cyclohydrolase I, putative OS=Ricinus communis GN=RCOM_1416900 PE=4 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.834e-17
Identity = 44/57 (77.19%), Postives = 52/57 (91.23%), Query Frame = 3
Query:    3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGIPSS 173
            S ++GG+V+VVVEA+HTCMISRGIEKFGS+TATIAVLGRFSTD  +RA FLQ IP+S
Sbjct:  407 SSILGGNVMVVVEANHTCMISRGIEKFGSNTATIAVLGRFSTDPSSRAMFLQSIPNS 463          
BLAST of EX570106 vs. TrEMBL
Match: B9IBE3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_573397 PE=4 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.834e-17
Identity = 45/56 (80.36%), Postives = 50/56 (89.29%), Query Frame = 3
Query:    3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGIPS 170
            S L+GGDV+VVVEA+HTCMISRGIEKFGSSTATIAVLGRFSTD   RA FL+ IP+
Sbjct:  404 SSLLGGDVMVVVEANHTCMISRGIEKFGSSTATIAVLGRFSTDPAARAMFLKNIPN 459          
BLAST of EX570106 vs. TrEMBL
Match: B9GQM6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_553210 PE=4 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.834e-17
Identity = 45/56 (80.36%), Postives = 49/56 (87.50%), Query Frame = 3
Query:    3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGIPS 170
            S L+GGDV+VVVEA+HTCMISRGIEKFGSSTATIAVLG FSTD   RA FLQ IP+
Sbjct:  402 SSLLGGDVVVVVEANHTCMISRGIEKFGSSTATIAVLGLFSTDPAARAKFLQNIPN 457          
BLAST of EX570106 vs. TrEMBL
Match: Q9SFV7_ARATH (At3g07270 OS=Arabidopsis thaliana GN=At3g07270 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.781e-16
Identity = 44/54 (81.48%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGI 164
            SPL+GGDVIVV EA HTCMISRGIEKFGSSTATIAVLGRFS+D   RA FL  I
Sbjct:  399 SPLVGGDVIVVAEAGHTCMISRGIEKFGSSTATIAVLGRFSSDNSARAMFLDKI 452          
BLAST of EX570106 vs. TrEMBL
Match: Q8S3C2_ARATH (GTP cyclohydrolase I OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.781e-16
Identity = 44/54 (81.48%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGI 164
            SPL+GGDVIVV EA HTCMISRGIEKFGSSTATIAVLGRFS+D   RA FL  I
Sbjct:  399 SPLVGGDVIVVAEAGHTCMISRGIEKFGSSTATIAVLGRFSSDNSARAMFLDKI 452          
BLAST of EX570106 vs. TrEMBL
Match: Q3EBB1_ARATH (Putative uncharacterized protein At3g07270.2 OS=Arabidopsis thaliana GN=At3g07270 PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.781e-16
Identity = 44/54 (81.48%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGI 164
            SPL+GGDVIVV EA HTCMISRGIEKFGSSTATIAVLGRFS+D   RA FL  I
Sbjct:  399 SPLVGGDVIVVAEAGHTCMISRGIEKFGSSTATIAVLGRFSSDNSARAMFLDKI 452          
BLAST of EX570106 vs. TrEMBL
Match: D7L6I6_ARALY (GTP cyclohydrolase I OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478046 PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.781e-16
Identity = 44/54 (81.48%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGI 164
            SPL+GGDVIVV EA HTCMISRGIEKFGSSTATIAVLGRFS+D   RA FL  I
Sbjct:  399 SPLVGGDVIVVAEAGHTCMISRGIEKFGSSTATIAVLGRFSSDNSARAMFLDKI 452          
BLAST of EX570106 vs. TrEMBL
Match: Q8VYU3_SOLLC (GTP cyclohydrolase I OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.437e-15
Identity = 42/57 (73.68%), Postives = 47/57 (82.46%), Query Frame = 3
Query:    3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGIPSS 173
            S  +G D+IVVVEA+HTCMISRGIEKFGS+TAT AVLGRFSTD   RA FLQ +P S
Sbjct:  395 SSFLGEDIIVVVEANHTCMISRGIEKFGSNTATFAVLGRFSTDPVARAKFLQSLPDS 451          
BLAST of EX570106 vs. TrEMBL
Match: A5BKQ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035826 PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.710e-14
Identity = 39/58 (67.24%), Postives = 49/58 (84.48%), Query Frame = 3
Query:    3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGIPSST 176
            S L+GGDVIVVVEASH+CM+SRGIEK GS+TAT+A+LGRFSTD   +  FLQ I +++
Sbjct:  376 SSLLGGDVIVVVEASHSCMVSRGIEKLGSNTATMALLGRFSTDAAAKNMFLQSIQNTS 433          
BLAST of EX570106 vs. TrEMBL
Match: D7TN70_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_26.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019962001 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.885e-14
Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = 3
Query:    3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGIPSS 173
            S L+GGDVIVVVEASH+CM+SRGIEK GS+TAT+A+LGRFSTD   +  FLQ I ++
Sbjct:  136 SSLLGGDVIVVVEASHSCMVSRGIEKLGSNTATMALLGRFSTDDTAKTMFLQRIQNT 192          
BLAST of EX570106 vs. SwissProt
Match: GCH1_DICDI (GTP cyclohydrolase 1 OS=Dictyostelium discoideum GN=gchA PE=1 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 3.679e-7
Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 3
Query:   24 VIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGIPSS 173
            V VV+EASH CM+ RG++K G+ST T +V G F  D +TRA F   I S+
Sbjct:  182 VAVVIEASHMCMVMRGVQKPGASTVTSSVCGIFEKDSRTRAEFFSLIKSN 231          
BLAST of EX570106 vs. TAIR peptide
Match: AT3G07270.2 (| Symbols: | GTP cyclohydrolase I | chr3:2314005-2317059 FORWARD LENGTH=466)

HSP 1 Score: 87.8113 bits (216), Expect = 2.765e-18
Identity = 44/54 (81.48%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGI 164
            SPL+GGDVIVV EA HTCMISRGIEKFGSSTATIAVLGRFS+D   RA FL  I
Sbjct:  399 SPLVGGDVIVVAEAGHTCMISRGIEKFGSSTATIAVLGRFSSDNSARAMFLDKI 452          
BLAST of EX570106 vs. TAIR peptide
Match: AT3G07270.1 (| Symbols: | GTP cyclohydrolase I | chr3:2315451-2317059 FORWARD LENGTH=466)

HSP 1 Score: 87.8113 bits (216), Expect = 2.765e-18
Identity = 44/54 (81.48%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGI 164
            SPL+GGDVIVV EA HTCMISRGIEKFGSSTATIAVLGRFS+D   RA FL  I
Sbjct:  399 SPLVGGDVIVVAEAGHTCMISRGIEKFGSSTATIAVLGRFSSDNSARAMFLDKI 452          
The following BLAST results are available for this feature:
BLAST of EX570106 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9SYL5_RICCO5.834e-1777.19GTP cyclohydrolase I, putative OS=Ricinus communis... [more]
B9IBE3_POPTR5.834e-1780.36Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GQM6_POPTR5.834e-1780.36Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q9SFV7_ARATH3.781e-1681.48At3g07270 OS=Arabidopsis thaliana GN=At3g07270 PE=... [more]
Q8S3C2_ARATH3.781e-1681.48GTP cyclohydrolase I OS=Arabidopsis thaliana PE=2 ... [more]
Q3EBB1_ARATH3.781e-1681.48Putative uncharacterized protein At3g07270.2 OS=Ar... [more]
D7L6I6_ARALY3.781e-1681.48GTP cyclohydrolase I OS=Arabidopsis lyrata subsp. ... [more]
Q8VYU3_SOLLC1.437e-1573.68GTP cyclohydrolase I OS=Solanum lycopersicum PE=2 ... [more]
A5BKQ2_VITVI2.710e-1467.24Putative uncharacterized protein OS=Vitis vinifera... [more]
D7TN70_VITVI7.885e-1468.42Whole genome shotgun sequence of line PN40024, sca... [more]
back to top
BLAST of EX570106 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
GCH1_DICDI3.679e-752.00GTP cyclohydrolase 1 OS=Dictyostelium discoideum G... [more]
back to top
BLAST of EX570106 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G07270.22.765e-1881.48| Symbols: | GTP cyclohydrolase I | chr3:2314005-... [more]
AT3G07270.12.765e-1881.48| Symbols: | GTP cyclohydrolase I | chr3:2315451-... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020602GTP cyclohydrolase I/Nitrile oxidoreductasePFAMPF01227GTP_cyclohydroIcoord: 6..37
score: 1.9
NoneNo IPR availableGENE3D3.30.1130.10no descriptioncoord: 7..55
score: 2.1
NoneNo IPR availablePANTHERPTHR11109GTP CYCLOHYDROLASE Icoord: 8..51
score: 4.5
NoneNo IPR availableSUPERFAMILY55620Tetrahydrobiopterin biosynthesis enzymes-likecoord: 7..58
score: 1.7
NoneNo IPR availableSEGsegsegcoord: 48..58
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570106 ID=EX570106; Name=EX570106; organism=Pisum sativum; type=EST; length=455bp
TTTCGCCGCTGATCGGTGGAGATGTGATAGTTGTTGTAGAGGCAAGCCAC
ACATGTATGATTTCTAGGGGTATTGAAAAATTTGGAAGTAGTACTGCCAC
TATTGCTGTTTTAGGACGATTCTCGACCGACCTTAAGACAAGGGCTTCCT
TCTTGCAGGGTATTCCAAGTTCTACATATTTTTAGGAGCAATGATTCTTG
ATTGAATGTGCTTGAAATAATTTAGTACTAGCTCCAATTGTTGTGGATTT
TGAAGTTTTGGAATTTGCTCAAATTTTGTTTCAGTTTTACATAGAATTAT
AGCTAGAAATTATTGAAGAAAAATTGATGGAATTCCTCTGGAATTCATAT
TTTCATACTAGCCAACTTTGGTCATAATTTGTTGTTGTTTAAGTTTACTC
TGATAGTTTTCTTTATGTTGAAGTTAGAATGATTGTTATCAATTTTGATT
ATTTT
back to top
Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR020602GTP_CycHdrlase_I_dom