EX570106
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX570106 vs. TrEMBL
Match: B9SYL5_RICCO (GTP cyclohydrolase I, putative OS=Ricinus communis GN=RCOM_1416900 PE=4 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.834e-17 Identity = 44/57 (77.19%), Postives = 52/57 (91.23%), Query Frame = 3 Query: 3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGIPSS 173 S ++GG+V+VVVEA+HTCMISRGIEKFGS+TATIAVLGRFSTD +RA FLQ IP+S Sbjct: 407 SSILGGNVMVVVEANHTCMISRGIEKFGSNTATIAVLGRFSTDPSSRAMFLQSIPNS 463
BLAST of EX570106 vs. TrEMBL
Match: B9IBE3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_573397 PE=4 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.834e-17 Identity = 45/56 (80.36%), Postives = 50/56 (89.29%), Query Frame = 3 Query: 3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGIPS 170 S L+GGDV+VVVEA+HTCMISRGIEKFGSSTATIAVLGRFSTD RA FL+ IP+ Sbjct: 404 SSLLGGDVMVVVEANHTCMISRGIEKFGSSTATIAVLGRFSTDPAARAMFLKNIPN 459
BLAST of EX570106 vs. TrEMBL
Match: B9GQM6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_553210 PE=4 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.834e-17 Identity = 45/56 (80.36%), Postives = 49/56 (87.50%), Query Frame = 3 Query: 3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGIPS 170 S L+GGDV+VVVEA+HTCMISRGIEKFGSSTATIAVLG FSTD RA FLQ IP+ Sbjct: 402 SSLLGGDVVVVVEANHTCMISRGIEKFGSSTATIAVLGLFSTDPAARAKFLQNIPN 457
BLAST of EX570106 vs. TrEMBL
Match: Q9SFV7_ARATH (At3g07270 OS=Arabidopsis thaliana GN=At3g07270 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.781e-16 Identity = 44/54 (81.48%), Postives = 46/54 (85.19%), Query Frame = 3 Query: 3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGI 164 SPL+GGDVIVV EA HTCMISRGIEKFGSSTATIAVLGRFS+D RA FL I Sbjct: 399 SPLVGGDVIVVAEAGHTCMISRGIEKFGSSTATIAVLGRFSSDNSARAMFLDKI 452
BLAST of EX570106 vs. TrEMBL
Match: Q8S3C2_ARATH (GTP cyclohydrolase I OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.781e-16 Identity = 44/54 (81.48%), Postives = 46/54 (85.19%), Query Frame = 3 Query: 3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGI 164 SPL+GGDVIVV EA HTCMISRGIEKFGSSTATIAVLGRFS+D RA FL I Sbjct: 399 SPLVGGDVIVVAEAGHTCMISRGIEKFGSSTATIAVLGRFSSDNSARAMFLDKI 452
BLAST of EX570106 vs. TrEMBL
Match: Q3EBB1_ARATH (Putative uncharacterized protein At3g07270.2 OS=Arabidopsis thaliana GN=At3g07270 PE=4 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.781e-16 Identity = 44/54 (81.48%), Postives = 46/54 (85.19%), Query Frame = 3 Query: 3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGI 164 SPL+GGDVIVV EA HTCMISRGIEKFGSSTATIAVLGRFS+D RA FL I Sbjct: 399 SPLVGGDVIVVAEAGHTCMISRGIEKFGSSTATIAVLGRFSSDNSARAMFLDKI 452
BLAST of EX570106 vs. TrEMBL
Match: D7L6I6_ARALY (GTP cyclohydrolase I OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478046 PE=4 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.781e-16 Identity = 44/54 (81.48%), Postives = 46/54 (85.19%), Query Frame = 3 Query: 3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGI 164 SPL+GGDVIVV EA HTCMISRGIEKFGSSTATIAVLGRFS+D RA FL I Sbjct: 399 SPLVGGDVIVVAEAGHTCMISRGIEKFGSSTATIAVLGRFSSDNSARAMFLDKI 452
BLAST of EX570106 vs. TrEMBL
Match: Q8VYU3_SOLLC (GTP cyclohydrolase I OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.437e-15 Identity = 42/57 (73.68%), Postives = 47/57 (82.46%), Query Frame = 3 Query: 3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGIPSS 173 S +G D+IVVVEA+HTCMISRGIEKFGS+TAT AVLGRFSTD RA FLQ +P S Sbjct: 395 SSFLGEDIIVVVEANHTCMISRGIEKFGSNTATFAVLGRFSTDPVARAKFLQSLPDS 451
BLAST of EX570106 vs. TrEMBL
Match: A5BKQ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035826 PE=4 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.710e-14 Identity = 39/58 (67.24%), Postives = 49/58 (84.48%), Query Frame = 3 Query: 3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGIPSST 176 S L+GGDVIVVVEASH+CM+SRGIEK GS+TAT+A+LGRFSTD + FLQ I +++ Sbjct: 376 SSLLGGDVIVVVEASHSCMVSRGIEKLGSNTATMALLGRFSTDAAAKNMFLQSIQNTS 433
BLAST of EX570106 vs. TrEMBL
Match: D7TN70_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_26.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019962001 PE=4 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.885e-14 Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = 3 Query: 3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGIPSS 173 S L+GGDVIVVVEASH+CM+SRGIEK GS+TAT+A+LGRFSTD + FLQ I ++ Sbjct: 136 SSLLGGDVIVVVEASHSCMVSRGIEKLGSNTATMALLGRFSTDDTAKTMFLQRIQNT 192
BLAST of EX570106 vs. SwissProt
Match: GCH1_DICDI (GTP cyclohydrolase 1 OS=Dictyostelium discoideum GN=gchA PE=1 SV=2) HSP 1 Score: 53.9138 bits (128), Expect = 3.679e-7 Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 3 Query: 24 VIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGIPSS 173 V VV+EASH CM+ RG++K G+ST T +V G F D +TRA F I S+ Sbjct: 182 VAVVIEASHMCMVMRGVQKPGASTVTSSVCGIFEKDSRTRAEFFSLIKSN 231
BLAST of EX570106 vs. TAIR peptide
Match: AT3G07270.2 (| Symbols: | GTP cyclohydrolase I | chr3:2314005-2317059 FORWARD LENGTH=466) HSP 1 Score: 87.8113 bits (216), Expect = 2.765e-18 Identity = 44/54 (81.48%), Postives = 46/54 (85.19%), Query Frame = 3 Query: 3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGI 164 SPL+GGDVIVV EA HTCMISRGIEKFGSSTATIAVLGRFS+D RA FL I Sbjct: 399 SPLVGGDVIVVAEAGHTCMISRGIEKFGSSTATIAVLGRFSSDNSARAMFLDKI 452
BLAST of EX570106 vs. TAIR peptide
Match: AT3G07270.1 (| Symbols: | GTP cyclohydrolase I | chr3:2315451-2317059 FORWARD LENGTH=466) HSP 1 Score: 87.8113 bits (216), Expect = 2.765e-18 Identity = 44/54 (81.48%), Postives = 46/54 (85.19%), Query Frame = 3 Query: 3 SPLIGGDVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFSTDLKTRASFLQGI 164 SPL+GGDVIVV EA HTCMISRGIEKFGSSTATIAVLGRFS+D RA FL I Sbjct: 399 SPLVGGDVIVVAEAGHTCMISRGIEKFGSSTATIAVLGRFSSDNSARAMFLDKI 452 The following BLAST results are available for this feature:
BLAST of EX570106 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of EX570106 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 1
BLAST of EX570106 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX570106 ID=EX570106; Name=EX570106; organism=Pisum sativum; type=EST; length=455bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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