EX568781

EST Overview
NameEX568781
Unique NameEX568781
TypeEST
OrganismPisum sativum (pea)
Sequence length581
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of EX568781 vs. TrEMBL
Match: C6T8U8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.393e-33
Identity = 78/130 (60.00%), Postives = 94/130 (72.31%), Query Frame = 1
Query:  103 ANGNSKQKEDNGTKHENDXXXXXXXXXXXAKTNVFPMNRIRTIIKAEISDLRVSQEAILAINKAAEKFLGQLAQEAYACCAQDRKKYLSYNHLSNVVSKQRRFDFLSDFVPEKVKAEDALRETISRGDRG 492
            +NG SKQ+++   K   +            K NVFPMNRIRT+IK E  D+RVSQEA+LAIN A EKFL Q +QEAYA C +DRKK LSY+HL++VVSKQRR+DFLSDFVPE+VKAE ALRE  + G  G
Sbjct:  110 SNGTSKQRDEGSKKGVAEGKGEE------GKMNVFPMNRIRTMIKGEDPDMRVSQEALLAINNAVEKFLEQFSQEAYAFCVRDRKKCLSYDHLAHVVSKQRRYDFLSDFVPERVKAEYALRERSAAGTGG 233          
BLAST of EX568781 vs. TrEMBL
Match: C6T271_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.814e-26
Identity = 71/144 (49.31%), Postives = 85/144 (59.03%), Query Frame = 1
Query:  103 ANGNSKQKEDNGTKHENDXXXXXXXXXXXAKTNVFPMNRIRTIIKAEISDLRVSQEAILAINKAA---------------------------EKFLGQLAQEAYACCAQDRKKYLSYNHLSNVVSKQRRFDFLSDFVPEKVKAE 453
            +NG SKQ+++   K               AK NVFPMNRIRT+IK E  ++RVSQEA+ AIN                              EKFL Q  Q+AYA CAQDRKK LSY+HL++VVSKQRR+DFLSDFVPE+VKAE
Sbjct:   61 SNGTSKQRDEGSKK-----GVAAEGNGEEAKMNVFPMNRIRTMIKGEDPEMRVSQEALFAINNTVVGFLFLASSSPLFRCLYPSSFSSFSLQEKFLEQFTQDAYAFCAQDRKKCLSYDHLAHVVSKQRRYDFLSDFVPERVKAE 199          
BLAST of EX568781 vs. TrEMBL
Match: D7SKW8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025169001 PE=4 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.707e-23
Identity = 51/88 (57.95%), Postives = 69/88 (78.41%), Query Frame = 1
Query:  205 FPMNRIRTIIKAEISDLRVSQEAILAINKAAEKFLGQLAQEAYACCAQDRKKYLSYNHLSNVVSKQRRFDFLSDFVPEKVKAEDALRE 468
            FPM+RI  I++++  D+R+SQEA+  INKA+E+FL Q   +AYAC  +DRK Y+SY H+++ VSK +RFDFLSDFVPE+V AE AL E
Sbjct:  333 FPMSRIERIVRSDCDDVRISQEALFLINKASEEFLQQFVNDAYACSVKDRKNYVSYKHIASAVSKCKRFDFLSDFVPERVSAEKALAE 420          
BLAST of EX568781 vs. TrEMBL
Match: B9HQA8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_821636 PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.107e-22
Identity = 59/119 (49.58%), Postives = 74/119 (62.18%), Query Frame = 1
Query:  112 NSKQKEDNGTKHENDXXXXXXXXXXXAKTNVFPMNRIRTIIKAEISDLRVSQEAILAINKAAEKFLGQLAQEAYACCAQDRKKYLSYNHLSNVVSKQRRFDFLSDFVPEKVKAEDALRE 468
            +SK K  N  K +                  FPM RI+ IIK+E S+  +SQ+ +  +NKA EKFL Q + EAY    QDRKK L+Y HLS VVSK+RRFDFLSDFVPEK+ A+DAL +
Sbjct:   85 SSKIKSANNAKRKGKDDDLDGEGEEDGTACRFPMARIKRIIKSEDSESLLSQDVVFLVNKATEKFLEQFSDEAYDYSVQDRKKSLAYKHLSTVVSKRRRFDFLSDFVPEKLNAKDALAD 203          
BLAST of EX568781 vs. TrEMBL
Match: B9T2Z4_RICCO (DNA polymerase epsilon subunit, putative OS=Ricinus communis GN=RCOM_0550250 PE=4 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.953e-19
Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query:  205 FPMNRIRTIIKAEISDLRVSQEAILAINKAAEKFLGQLAQEAYACCAQDRKKYLSYNHLSNVVSKQRRFDFLSDFVPEKVKAEDALR-----ETISRGDR 489
            FPM RI+ IIK E    +++Q+ +  +NKA E FL Q  +EAY C  ++  + L+Y HLS+VVS QRRFDFLSDFVP+++KA++ALR     ET+ R ++
Sbjct:  129 FPMARIKRIIKTEDIGSKLTQDVVFLVNKATEMFLEQFCEEAYECAVREENESLAYKHLSSVVSGQRRFDFLSDFVPKQLKAKEALRRRTLVETVQRQEQ 228          
BLAST of EX568781 vs. TrEMBL
Match: Q9LN09_ARATH (At1g07980 OS=Arabidopsis thaliana GN=At1g07980 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.684e-18
Identity = 43/88 (48.86%), Postives = 66/88 (75.00%), Query Frame = 1
Query:  205 FPMNRIRTIIKAEISDLRVSQEAILAINKAAEKFLGQLAQEAYACCAQDRKKYLSYNHLSNVVSKQRRFDFLSDFVPEKVKAEDALRE 468
            FPMNRIR I++++ S  ++ Q+A+  +NKA E F+ + ++EAY    +D+KK++ Y HLS+VVS  +R++FL+D VPEK+KAE AL E
Sbjct:  110 FPMNRIRRIMRSDNSAPQIMQDAVFLVNKATEMFIERFSEEAYDSSVKDKKKFIHYKHLSSVVSNDQRYEFLADSVPEKLKAEAALEE 197          
BLAST of EX568781 vs. TrEMBL
Match: Q0WP19_ARATH (Putative uncharacterized protein At1g07980 OS=Arabidopsis thaliana GN=At1g07980 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.684e-18
Identity = 43/88 (48.86%), Postives = 66/88 (75.00%), Query Frame = 1
Query:  205 FPMNRIRTIIKAEISDLRVSQEAILAINKAAEKFLGQLAQEAYACCAQDRKKYLSYNHLSNVVSKQRRFDFLSDFVPEKVKAEDALRE 468
            FPMNRIR I++++ S  ++ Q+A+  +NKA E F+ + ++EAY    +D+KK++ Y HLS+VVS  +R++FL+D VPEK+KAE AL E
Sbjct:  110 FPMNRIRRIMRSDNSAPQIMQDAVFLVNKATEMFIERFSEEAYDSSVKDKKKFIHYKHLSSVVSNDQRYEFLADSVPEKLKAEAALEE 197          
BLAST of EX568781 vs. TrEMBL
Match: Q10AH3_ORYSJ (Histone-like transcription factor and archaeal histone family protein, expressed OS=Oryza sativa subsp. japonica GN=Os03g0852300 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.811e-18
Identity = 47/91 (51.65%), Postives = 64/91 (70.33%), Query Frame = 1
Query:  205 FPMNRIRTIIKAEISDLRVSQEAILAINKAAEKFLGQLAQEAYACCAQDRKKYLSYNHLSNVVSKQRRFDFLSDFVPEKVKAEDALRETIS 477
            FPM R+R I++AE + +R S EA+  INKA E FL + A +AY    +DRKK + Y++LS  V  Q+R+ FLSDFVP+KV AEDAL+  +S
Sbjct:  206 FPMARVRQIMRAEDATIRPSNEAVFLINKATEIFLKRFADDAYRNALKDRKKSIVYDNLSTAVCNQKRYKFLSDFVPQKVTAEDALKAPVS 296          
BLAST of EX568781 vs. TrEMBL
Match: D6MKG3_9ASPA (Transcription factor (Fragment) OS=Lycoris longituba PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.206e-18
Identity = 45/89 (50.56%), Postives = 68/89 (76.40%), Query Frame = 1
Query:  205 FPMNRIRTIIKAE--ISDLRVSQEAILAINKAAEKFLGQLAQEAYACCAQDRKKYLSYNHLSNVVSKQRRFDFLSDFVPEKVKAEDALR 465
            FPM R+  +++ E   +D+R S+EA   INKA+E FL + A++A+A   ++R+  +SYNHLS+VVS  +R++FLSDFVP+KVKAE+AL+
Sbjct:   86 FPMTRVWRLVRGEGGNADIRSSREAAFLINKASEMFLHRFAEDAFATAVKERRNSISYNHLSSVVSNGKRYEFLSDFVPQKVKAENALK 174          
BLAST of EX568781 vs. TrEMBL
Match: D6MK76_9ASPA (Transcription factor (Fragment) OS=Lycoris longituba PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.400e-17
Identity = 45/89 (50.56%), Postives = 68/89 (76.40%), Query Frame = 1
Query:  205 FPMNRIRTIIKAE--ISDLRVSQEAILAINKAAEKFLGQLAQEAYACCAQDRKKYLSYNHLSNVVSKQRRFDFLSDFVPEKVKAEDALR 465
            FPM R+  +++ E   +D+R S+EA   INKA+E FL + A++A+A   ++R+  +SYNHLS+VVS  +R++FLSDFVP+KVKAE+AL+
Sbjct:   78 FPMTRVWRLVRGEGGNTDIRSSREAAFLINKASEMFLHRFAEDAFANAVKERRNSISYNHLSSVVSNGKRYEFLSDFVPQKVKAENALK 166          
BLAST of EX568781 vs. SwissProt
Match: CHRC1_HUMAN (Chromatin accessibility complex protein 1 OS=Homo sapiens GN=CHRAC1 PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.671e-8
Identity = 30/86 (34.88%), Postives = 50/86 (58.14%), Query Frame = 1
Query:  208 PMNRIRTIIKAEISDLRVSQEAILAINKAAEKFLGQLAQEAYACCAQDRKKYLSYNHLSNVVSKQRRFDFLSDFVPEKVKAEDALR 465
            P++RIR I+K+      ++QEA++   KA E F+  LA  +Y   +   KK L+Y+ L+N   +   F FL+D +P+K+ A   L+
Sbjct:   20 PLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRHGSGKEKKVLTYSDLANTAQQSETFQFLADILPKKILASKYLK 105          
BLAST of EX568781 vs. TAIR peptide
Match: AT1G07980.1 (| Symbols: NF-YC10 | nuclear factor Y, subunit C10 | chr1:2473523-2474910 REVERSE LENGTH=206)

HSP 1 Score: 95.1301 bits (235), Expect = 2.793e-20
Identity = 43/88 (48.86%), Postives = 66/88 (75.00%), Query Frame = 1
Query:  205 FPMNRIRTIIKAEISDLRVSQEAILAINKAAEKFLGQLAQEAYACCAQDRKKYLSYNHLSNVVSKQRRFDFLSDFVPEKVKAEDALRE 468
            FPMNRIR I++++ S  ++ Q+A+  +NKA E F+ + ++EAY    +D+KK++ Y HLS+VVS  +R++FL+D VPEK+KAE AL E
Sbjct:  110 FPMNRIRRIMRSDNSAPQIMQDAVFLVNKATEMFIERFSEEAYDSSVKDKKKFIHYKHLSSVVSNDQRYEFLADSVPEKLKAEAALEE 197          
The following BLAST results are available for this feature:
BLAST of EX568781 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6T8U8_SOYBN1.393e-3360.00Putative uncharacterized protein OS=Glycine max PE... [more]
C6T271_SOYBN2.814e-2649.31Putative uncharacterized protein OS=Glycine max PE... [more]
D7SKW8_VITVI1.707e-2357.95Whole genome shotgun sequence of line PN40024, sca... [more]
B9HQA8_POPTR1.107e-2249.58Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9T2Z4_RICCO1.953e-1949.00DNA polymerase epsilon subunit, putative OS=Ricinu... [more]
Q9LN09_ARATH3.684e-1848.86At1g07980 OS=Arabidopsis thaliana GN=At1g07980 PE=... [more]
Q0WP19_ARATH3.684e-1848.86Putative uncharacterized protein At1g07980 OS=Arab... [more]
Q10AH3_ORYSJ4.811e-1851.65Histone-like transcription factor and archaeal his... [more]
D6MKG3_9ASPA8.206e-1850.56Transcription factor (Fragment) OS=Lycoris longitu... [more]
D6MK76_9ASPA1.400e-1750.56Transcription factor (Fragment) OS=Lycoris longitu... [more]
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BLAST of EX568781 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
CHRC1_HUMAN4.671e-834.88Chromatin accessibility complex protein 1 OS=Homo ... [more]
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BLAST of EX568781 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G07980.12.793e-2048.86| Symbols: NF-YC10 | nuclear factor Y, subunit C10... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003958Transcription factor CBF/NF-Y/archaeal histonePFAMPF00808CBFD_NFYB_HMFcoord: 69..131
score: 3.1
IPR009072Histone-foldGENE3D1.10.20.10no descriptioncoord: 69..145
score: 6.7
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 69..146
score: 5.1
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 50..163
score: 8.8
NoneNo IPR availableSEGsegsegcoord: 2..33
score: NAcoord: 53..63
score
NoneNo IPR availableSEGsegsegcoord: 1..29
score
NoneNo IPR availableSEGsegsegcoord: 40..52
score: NAcoord: 73..103
score
NoneNo IPR availableSEGsegsegcoord: 28..49
score
NoneNo IPR availableSEGsegsegcoord: 21..46
score: NAcoord: 56..87
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX568781 ID=EX568781; Name=EX568781; organism=Pisum sativum; type=EST; length=581bp
ACTAGCAAAATCAAAAAGGAAGAAGACGTAGAAAAATCCAGTGAGAAGAA
GAAGAAGAACGAGGAGAACAAAGGCAACAACAAGAGTAAGAAGCTCAAGT
TCGCCAATGGAAATTCCAAACAAAAAGAGGATAACGGAACGAAACACGAG
AACGATGTGGAAGAAGAAGAAGGAGTAGGAGAAGAAGAAGCGAAAACGAA
CGTGTTTCCGATGAATCGAATCAGGACGATAATAAAAGCAGAAATCAGCG
ATTTGCGTGTTTCTCAGGAAGCTATATTGGCGATTAACAAAGCTGCGGAG
AAGTTTCTTGGACAATTAGCTCAGGAAGCTTATGCTTGTTGTGCTCAGGA
TCGTAAGAAGTATCTGAGTTACAATCACCTATCAAATGTTGTTAGTAAGC
AAAGAAGATTCGACTTTCTGTCTGATTTTGTTCCCGAGAAAGTGAAAGCC
GAGGACGCATTAAGAGAGACAATCTCAAGAGGGGATAGAGGCGGTTAGGA
AATGTAAAAGCAAAGTTAATTGATAATCTAAGCCTGTACTTTTCTTTATC
TGTTACATTCTGAAATGGAAATATGTTTGAT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR003958CBFA_NFYB_domain
IPR009072Histone-fold