EX569584
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX569584 vs. TrEMBL
Match: B9I2P0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_834282 PE=4 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.825e-41 Identity = 81/113 (71.68%), Postives = 100/113 (88.50%), Query Frame = 1 Query: 25 VLSIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKNVLLGSTLYIEGNLETKVFSDPITGLVRRIREVAVRRHGRVVFLSPGDDSEQQAQQNDLRAVGYY 363 + S+GTGGIRNNRRPL +E+PREYANRCAVQWHRV+VYPERLG ++M+NVL GS LY+EGNLETKVF+DPITGLVRRIRE+AVR++GR+VFL G ++QQA +L+ +GYY Sbjct: 109 IFSMGTGGIRNNRRPLQNEDPREYANRCAVQWHRVSVYPERLGRVVMQNVLPGSILYVEGNLETKVFTDPITGLVRRIREIAVRQNGRLVFLGKG-ANDQQASSLELKGLGYY 220
BLAST of EX569584 vs. TrEMBL
Match: B9RE51_RICCO (Single-stranded DNA-binding protein, mitochondrial, putative OS=Ricinus communis GN=RCOM_1618400 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.113e-41 Identity = 79/116 (68.10%), Postives = 101/116 (87.07%), Query Frame = 1 Query: 16 SRAVLSIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKNVLLGSTLYIEGNLETKVFSDPITGLVRRIREVAVRRHGRVVFLSPGDDSEQQAQQNDLRAVGYY 363 S + S+GTGGIRNNRRP+ +E PREYANRCAVQWHRV+VYPERLG+++MK++L GS +Y+EGNLETKVF+DPITGLVRRIREVA+R+ GR+VFL+ G D E++A +L+ +GYY Sbjct: 109 SVTMFSLGTGGIRNNRRPMQNEEPREYANRCAVQWHRVSVYPERLGSIVMKHLLPGSIMYLEGNLETKVFTDPITGLVRRIREVAIRQDGRIVFLAKGGD-EKEASSKELKGLGYY 223
BLAST of EX569584 vs. TrEMBL
Match: D7U3W8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_33.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022737001 PE=4 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 9.056e-41 Identity = 79/113 (69.91%), Postives = 97/113 (85.84%), Query Frame = 1 Query: 25 VLSIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKNVLLGSTLYIEGNLETKVFSDPITGLVRRIREVAVRRHGRVVFLSPGDDSEQQAQQNDLRAVGYY 363 + S+GTGGIRNNRRPLD+E+P+EYANR AVQWHRVTVYPE LGN++MK+V GS LY+EGNLETK+F+DP+TGLVRRIREVA+RR+GR+VFL G D + QA +L+ GYY Sbjct: 110 LFSVGTGGIRNNRRPLDNEDPKEYANRSAVQWHRVTVYPENLGNIVMKHVSPGSVLYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRLVFLGKGGDGD-QASNVELKGAGYY 221
BLAST of EX569584 vs. TrEMBL
Match: Q9LII1_ARATH (Similarity to unknown protein OS=Arabidopsis thaliana GN=At3g18580 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.466e-38 Identity = 77/113 (68.14%), Postives = 95/113 (84.07%), Query Frame = 1 Query: 25 VLSIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKNVLLGSTLYIEGNLETKVFSDPITGLVRRIREVAVRRHGRVVFLSPGDDSEQQAQQNDLRAVGYY 363 + S+GTGGIRNNRRPL +E+PREYA+R AVQWHRV+VYPERL +L++KNV G+ +Y+EGNLETK+F+DP+TGLVRRIREVA+RR+GRVVFL D QQ +LR VGYY Sbjct: 106 LFSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLADLVLKNVEPGTVIYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKAGDM-QQPSSAELRGVGYY 217
BLAST of EX569584 vs. TrEMBL
Match: D7L8J7_ARALY (Single-strand-binding family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479363 PE=4 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.221e-38 Identity = 77/113 (68.14%), Postives = 94/113 (83.19%), Query Frame = 1 Query: 25 VLSIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKNVLLGSTLYIEGNLETKVFSDPITGLVRRIREVAVRRHGRVVFLSPGDDSEQQAQQNDLRAVGYY 363 + S+GTGGIRNNRRPL +E+PREYA+R AVQWHRV+VYPERL L++KNV G+ +Y+EGNLETK+F+DP+TGLVRRIREVA+RR+GRVVFL D QQ +LR VGYY Sbjct: 112 LFSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLAELVLKNVEPGTVIYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKAGDM-QQPSSAELRGVGYY 223
BLAST of EX569584 vs. TrEMBL
Match: C5XF43_SORBI (Putative uncharacterized protein Sb03g029310 OS=Sorghum bicolor GN=Sb03g029310 PE=4 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.937e-36 Identity = 77/120 (64.17%), Postives = 95/120 (79.17%), Query Frame = 1 Query: 10 RNSRAVL--SIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKNVLLGSTLYIEGNLETKVFSDPITGLVRRIREVAVRRHGRVVFLSPGDDSEQQAQQNDLRAVGYY 363 RN R V+ S+GTGGIRNNRRPLD E P +YA+RC+VQWHRV VYPERLG L +KNV G+ LY+EGNLETKVF DPITGLVRRIRE+AVR GR++FL G+D+ + +++ VGY+ Sbjct: 105 RNGRTVVLFSLGTGGIRNNRRPLDREEPHQYADRCSVQWHRVCVYPERLGTLALKNVKTGTVLYLEGNLETKVFCDPITGLVRRIREIAVRSTGRLLFL--GNDT-NAPKLGEVKGVGYF 221
BLAST of EX569584 vs. TrEMBL
Match: Q5VP75_ORYSJ (Os01g0642900 protein OS=Oryza sativa subsp. japonica GN=P0510C12.21 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.146e-35 Identity = 76/120 (63.33%), Postives = 95/120 (79.17%), Query Frame = 1 Query: 10 RNSRAVL--SIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKNVLLGSTLYIEGNLETKVFSDPITGLVRRIREVAVRRHGRVVFLSPGDDSEQQAQQNDLRAVGYY 363 R+ R V+ S+GTGGIRNNRRPLD E P +YA RC+VQWHRV +YPERLG+L +K+V GS LY+EGNLETKVFSDPITGLVRRIRE+AVR +GR++FL G+D + + + VGY+ Sbjct: 108 RSGRTVVLFSLGTGGIRNNRRPLDREEPHQYAERCSVQWHRVCIYPERLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRSNGRLLFL--GNDC-NAPKLGEAKGVGYF 224
BLAST of EX569584 vs. TrEMBL
Match: A2WT49_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03039 PE=4 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.146e-35 Identity = 76/120 (63.33%), Postives = 95/120 (79.17%), Query Frame = 1 Query: 10 RNSRAVL--SIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKNVLLGSTLYIEGNLETKVFSDPITGLVRRIREVAVRRHGRVVFLSPGDDSEQQAQQNDLRAVGYY 363 R+ R V+ S+GTGGIRNNRRPLD E P +YA RC+VQWHRV +YPERLG+L +K+V GS LY+EGNLETKVFSDPITGLVRRIRE+AVR +GR++FL G+D + + + VGY+ Sbjct: 108 RSGRTVVLFSLGTGGIRNNRRPLDREEPHQYAERCSVQWHRVCIYPERLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVRSNGRLLFL--GNDC-NAPKLGEAKGVGYF 224
BLAST of EX569584 vs. TrEMBL
Match: A9NW20_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.685e-34 Identity = 64/113 (56.64%), Postives = 95/113 (84.07%), Query Frame = 1 Query: 25 VLSIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKNVLLGSTLYIEGNLETKVFSDPITGLVRRIREVAVRRHGRVVFLSPGDDSEQQAQQNDLRAVGYY 363 + S+GTGG+ NNRRPL+ E+PREYA+R VQWHRV++Y + LG + M+++ G+ +Y+EGNLETK+FSDPITGLV+R+RE+A+RR GR++FL+ G++S ++QQ+ L+ VGY+ Sbjct: 112 MFSVGTGGMHNNRRPLEDESPREYADRSMVQWHRVSIYADNLGGIAMQHLKQGAHVYLEGNLETKIFSDPITGLVKRVREIAIRRQGRLIFLNDGNESTDKSQQS-LKGVGYF 223
BLAST of EX569584 vs. TrEMBL
Match: B6U5B2_MAIZE (Single-stranded DNA-binding protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.813e-34 Identity = 70/113 (61.95%), Postives = 90/113 (79.65%), Query Frame = 1 Query: 25 VLSIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKNVLLGSTLYIEGNLETKVFSDPITGLVRRIREVAVRRHGRVVFLSPGDDSEQQAQQNDLRAVGYY 363 + S+GTGGIRNNRRPLD E P +YA+RC+VQWHRV VYP+RLG + + NV G+ LY+EGNLETKVF DPITGLVRRIRE+AVR GR++FL G+D+ + +++ VGY+ Sbjct: 115 LFSLGTGGIRNNRRPLDREEPHQYADRCSVQWHRVCVYPDRLGTVALNNVKTGTILYLEGNLETKVFCDPITGLVRRIREIAVRSSGRLLFL--GNDA-NAPKLGEVKGVGYF 224
BLAST of EX569584 vs. SwissProt
Match: SSBP_ARATH (Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana GN=At4g11060 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.774e-11 Identity = 35/103 (33.98%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 10 RNSRAV--LSIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKNVLLGSTLYIEGNLETKVFSDPITGLVRRIREVAVRRHGRVVFLSPGD 312 RN R V ++GTGG+ + R P+ QWHR+ V+ E LG+ ++ + S++Y+EG++ET+V++D I+ V+ I E+ VRR G++ + G+ Sbjct: 90 RNGRTVTIFTVGTGGMFDQRLVGATNQPKP------AQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEICVRRDGKIRMIKYGE 186
BLAST of EX569584 vs. TAIR peptide
Match: AT3G18580.1 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr3:6396940-6398068 REVERSE LENGTH=217) HSP 1 Score: 161.77 bits (408), Expect = 2.065e-40 Identity = 77/113 (68.14%), Postives = 95/113 (84.07%), Query Frame = 1 Query: 25 VLSIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKNVLLGSTLYIEGNLETKVFSDPITGLVRRIREVAVRRHGRVVFLSPGDDSEQQAQQNDLRAVGYY 363 + S+GTGGIRNNRRPL +E+PREYA+R AVQWHRV+VYPERL +L++KNV G+ +Y+EGNLETK+F+DP+TGLVRRIREVA+RR+GRVVFL D QQ +LR VGYY Sbjct: 106 LFSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLADLVLKNVEPGTVIYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKAGDM-QQPSSAELRGVGYY 217
BLAST of EX569584 vs. TAIR peptide
Match: AT4G11060.1 (| Symbols: MTSSB | mitochondrially targeted single-stranded DNA binding protein | chr4:6754820-6756230 REVERSE LENGTH=201) HSP 1 Score: 67.781 bits (164), Expect = 4.058e-12 Identity = 35/103 (33.98%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 10 RNSRAV--LSIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLGNLLMKNVLLGSTLYIEGNLETKVFSDPITGLVRRIREVAVRRHGRVVFLSPGD 312 RN R V ++GTGG+ + R P+ QWHR+ V+ E LG+ ++ + S++Y+EG++ET+V++D I+ V+ I E+ VRR G++ + G+ Sbjct: 90 RNGRTVTIFTVGTGGMFDQRLVGATNQPKP------AQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEICVRRDGKIRMIKYGE 186 The following BLAST results are available for this feature:
BLAST of EX569584 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of EX569584 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 1
BLAST of EX569584 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX569584 ID=EX569584; Name=EX569584; organism=Pisum sativum; type=EST; length=531bpback to top |