EX570068
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX570068 vs. TrEMBL
Match: B9RMH5_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1080870 PE=4 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.644e-19 Identity = 50/79 (63.29%), Postives = 58/79 (73.42%), Query Frame = 3 Query: 3 NGTPRG*EKAQKLLMLFRQQRRDESP---AEAHECPPESSDLSVPPAEMKPLCKSMTRRKMGKGFGFFWRSKSYSVYQC 230 NGT RG EKAQKLLMLFR+QR+ + P AE ESS ++P E KPLCKS++RRKMGK FFW+SKSYSVYQC Sbjct: 696 NGTIRGKEKAQKLLMLFREQRQRDQPQPPAEVRFQRAESSSKAMPAQESKPLCKSVSRRKMGKALSFFWKSKSYSVYQC 774
BLAST of EX570068 vs. TrEMBL
Match: B9HT95_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_726064 PE=4 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.759e-19 Identity = 52/88 (59.09%), Postives = 59/88 (67.05%), Query Frame = 3 Query: 3 NGTPRG*EKAQKLLMLFRQQR------------RDESPAEAHECPPESSDLSVPPAEMKPLCKSMTRRKMGKGFGFFWRSKSYSVYQC 230 NGT RG EKAQKLLMLFR+QR RD+S AE ESS +S+P E KPLCKS++RRKMGK FW+SKSYSVYQC Sbjct: 699 NGTTRGKEKAQKLLMLFREQRQRDQPSAEVHFQRDQSSAEVRFQRIESSSMSMPAPETKPLCKSVSRRKMGKAISVFWKSKSYSVYQC 786
BLAST of EX570068 vs. TrEMBL
Match: B9HL82_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_803799 PE=4 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.060e-18 Identity = 50/77 (64.94%), Postives = 56/77 (72.73%), Query Frame = 3 Query: 3 NGTPRG*EKAQKLLMLFRQQR-RDESPAEAHECPPESSDLSVPPAEMKPLCKSMTRRKMGKGFGFFWRSKSYSVYQC 230 NGT RG EKAQKLLMLFR+QR RD+ AE ESS S+P E KP CK ++RRKMGK FFW+SKSYSVYQC Sbjct: 699 NGTTRGKEKAQKLLMLFREQRQRDQPSAEVCFQRTESSSKSMPAPESKPQCKPVSRRKMGKAISFFWKSKSYSVYQC 775
BLAST of EX570068 vs. TrEMBL
Match: A5C9K5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036163 PE=4 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.433e-15 Identity = 47/91 (51.65%), Postives = 56/91 (61.54%), Query Frame = 3 Query: 3 NGTPRG*EKAQKLLMLFRQQR-RDESPAEA--------------HECPPESSDLSVPPAEMKPLCKSMTRRKMGKGFGFFWRSKSYSVYQC 230 NGT RG EKAQKLLMLFR+QR RD SP + P ES L P E KP CKS++RRK+GK + + W+SK+YSVYQC Sbjct: 693 NGTVRGKEKAQKLLMLFREQRQRDPSPVGSPHHTESSTEAVPGPESKPLESKALETKPLESKPYCKSISRRKVGKAWNYLWKSKNYSVYQC 783
BLAST of EX570068 vs. TrEMBL
Match: D7KBV1_ARALY (U-box domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_890324 PE=4 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.135e-12 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 3 Query: 3 NGTPRG*EKAQKLLMLFRQQRRDESPAEAHECPPESSDLSVPP----------AEMKPLCKSMTRRKMGKGFGFFWRSKSYSVYQC 230 NGT RG E+AQKLL LFR+ R+ + + H P+ ++++ P E KP CKS +R+KMG+ F F W+SKS+SVYQC Sbjct: 686 NGTQRGRERAQKLLTLFRELRQRD---QTHLTEPQHTEVTSPEDGFSVAAAAVTESKPQCKSASRKKMGRAFSFLWKSKSFSVYQC 768
BLAST of EX570068 vs. TrEMBL
Match: D7KAP1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_472912 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.367e-10 Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = 3 Query: 3 NGTPRG*EKAQKLLMLFRQQR--------RDESPAEAHECPPE-SSDLSVPPAEMKPLCKSMTRRK-MGKGFGFFWRSKSYSVY 224 NG+PRG +K+QKLLMLFR+QR RDE+P + P + +S P +E+KPL KS++RRK M + F F W+ KSYS++ Sbjct: 682 NGSPRGRDKSQKLLMLFREQRQRDQPSPKRDEAPRKTVSAPMAIPAPVSAPESEVKPLTKSISRRKTMTRPFSFLWK-KSYSIH 764
BLAST of EX570068 vs. TrEMBL
Match: D7KVL0_ARALY (Armadillo/beta-catenin repeat family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_315769 PE=4 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.100e-7 Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = 3 Query: 3 NGTPRG*EKAQKLLMLFRQQRRD-ESPAEAHECPPE----------------SSDLSVPPAEMKP--LCKSMTRRK-MGKGFGFFWRSKSYSV 221 NGTPRG EK+QKLLMLFR+QR+ + P+ + PP+ S+ S P + +P L KSM+RRK + + F F W+ KSYSV Sbjct: 694 NGTPRGREKSQKLLMLFREQRQQRDQPSPNRDKPPQKEPPRKSLSAPMSVHGSNPASAPVPDYEPRFLSKSMSRRKSLARPFSFLWK-KSYSV 785
BLAST of EX570068 vs. TrEMBL
Match: D5A903_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.436e-7 Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 3 Query: 3 NGTPRG*EKAQKLLMLFRQQRRDESPAEAHE--CPPESSDLSVPPAEMKPLCKSMTRRKMGKGFGFFWRSKSYSVYQC 230 NG+PRG +KAQKLL FR+QR+ + ++ C P++S E K ++ T +K+G+ FW+SKS++ YQC Sbjct: 295 NGSPRGRDKAQKLLQHFREQRQRDVSCQSSTAVCTPQTSIYGESLKEKKTTHRT-TSKKIGRTLSLFWKSKSFAFYQC 371
BLAST of EX570068 vs. SwissProt
Match: PUB45_ARATH (U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.285e-14 Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 3 Query: 3 NGTPRG*EKAQKLLMLFRQQR-RDES----PAEAHECPPES--SDLSVPPAEMKPLCKSMTRRKMGKGFGFFWRSKSYSVYQC 230 NGT RG E+AQKLL LFR+ R RD++ P PE S S E KP CKS +R+KMG+ F F W+SKS+SVYQC Sbjct: 686 NGTQRGRERAQKLLTLFRELRQRDQTHLTEPQHTEVTSPEDGFSVASAAVTETKPQCKSASRKKMGRAFSFLWKSKSFSVYQC 768
BLAST of EX570068 vs. SwissProt
Match: PUB6_ARATH (U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6 PE=2 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 7.563e-11 Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 3 Query: 3 NGTPRG*EKAQKLLMLFRQQRRDESPAEAHECPPES---------SDLSVPPAEMKPLCKSMTRRK-MGKGFGFFWRSKSYSVY 224 NG+PRG +K+QKLLMLFR+QR + P+ E P + +S P +E+KPL KS++RRK M + F F W+ KS+S++ Sbjct: 688 NGSPRGRDKSQKLLMLFREQRHRDQPSPNKEEAPRKTVSAPMAIPAPVSAPESEVKPLTKSISRRKTMTRPFSFLWK-KSHSIH 770
BLAST of EX570068 vs. SwissProt
Match: PUB7_ARATH (U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7 PE=1 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 1.426e-9 Identity = 45/93 (48.39%), Postives = 54/93 (58.06%), Query Frame = 3 Query: 3 NGTPRG*EKAQKLLMLFRQQR--RDESPAEAHECP---PESSDLSVP-------PA-------EMKPLCKSMTRRK-MGKGFGFFWRSKSYSV 221 NGTPRG EK+QKLLMLFR++R RD+ + E P P LS P PA E + L KSM+RRK M + F FFW+ KSYSV Sbjct: 689 NGTPRGREKSQKLLMLFREERQQRDQPSSNRDEPPQKEPARKSLSAPLSVHGSTPASASVQDYEPRVLSKSMSRRKSMARPFSFFWK-KSYSV 780
BLAST of EX570068 vs. TAIR peptide
Match: AT1G27910.1 (| Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:9720962-9723975 REVERSE LENGTH=768) HSP 1 Score: 76.6406 bits (187), Expect = 5.116e-15 Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 3 Query: 3 NGTPRG*EKAQKLLMLFRQQR-RDES----PAEAHECPPES--SDLSVPPAEMKPLCKSMTRRKMGKGFGFFWRSKSYSVYQC 230 NGT RG E+AQKLL LFR+ R RD++ P PE S S E KP CKS +R+KMG+ F F W+SKS+SVYQC Sbjct: 686 NGTQRGRERAQKLLTLFRELRQRDQTHLTEPQHTEVTSPEDGFSVASAAVTETKPQCKSASRKKMGRAFSFLWKSKSFSVYQC 768
BLAST of EX570068 vs. TAIR peptide
Match: AT1G24330.1 (| Symbols: | ARM repeat superfamily protein | chr1:8631779-8634835 FORWARD LENGTH=771) HSP 1 Score: 65.855 bits (159), Expect = 9.030e-12 Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 3 Query: 3 NGTPRG*EKAQKLLMLFRQQRRDESPAEAHECPPES---------SDLSVPPAEMKPLCKSMTRRK-MGKGFGFFWRSKSYSVY 224 NG+PRG +K+QKLLMLFR+QR + P+ E P + +S P +E+KPL KS++RRK M + F F W+ KS+S++ Sbjct: 688 NGSPRGRDKSQKLLMLFREQRHRDQPSPNKEEAPRKTVSAPMAIPAPVSAPESEVKPLTKSISRRKTMTRPFSFLWK-KSHSIH 770
BLAST of EX570068 vs. TAIR peptide
Match: AT1G67530.2 (| Symbols: | ARM repeat superfamily protein | chr1:25308229-25311081 FORWARD LENGTH=782) HSP 1 Score: 61.6178 bits (148), Expect = 1.703e-10 Identity = 45/93 (48.39%), Postives = 54/93 (58.06%), Query Frame = 3 Query: 3 NGTPRG*EKAQKLLMLFRQQR--RDESPAEAHECP---PESSDLSVP-------PA-------EMKPLCKSMTRRK-MGKGFGFFWRSKSYSV 221 NGTPRG EK+QKLLMLFR++R RD+ + E P P LS P PA E + L KSM+RRK M + F FFW+ KSYSV Sbjct: 689 NGTPRGREKSQKLLMLFREERQQRDQPSSNRDEPPQKEPARKSLSAPLSVHGSTPASASVQDYEPRVLSKSMSRRKSMARPFSFFWK-KSYSV 780
BLAST of EX570068 vs. TAIR peptide
Match: AT1G67530.1 (| Symbols: | ARM repeat superfamily protein | chr1:25308229-25311081 FORWARD LENGTH=782) HSP 1 Score: 61.6178 bits (148), Expect = 1.703e-10 Identity = 45/93 (48.39%), Postives = 54/93 (58.06%), Query Frame = 3 Query: 3 NGTPRG*EKAQKLLMLFRQQR--RDESPAEAHECP---PESSDLSVP-------PA-------EMKPLCKSMTRRK-MGKGFGFFWRSKSYSV 221 NGTPRG EK+QKLLMLFR++R RD+ + E P P LS P PA E + L KSM+RRK M + F FFW+ KSYSV Sbjct: 689 NGTPRGREKSQKLLMLFREERQQRDQPSSNRDEPPQKEPARKSLSAPLSVHGSTPASASVQDYEPRVLSKSMSRRKSMARPFSFFWK-KSYSV 780 The following BLAST results are available for this feature:
BLAST of EX570068 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 8
BLAST of EX570068 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 3
BLAST of EX570068 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX570068 ID=EX570068; Name=EX570068; organism=Pisum sativum; type=EST; length=416bpback to top |