EX570068

EST Overview
NameEX570068
Unique NameEX570068
TypeEST
OrganismPisum sativum (pea)
Sequence length416
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of EX570068 vs. TrEMBL
Match: B9RMH5_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1080870 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.644e-19
Identity = 50/79 (63.29%), Postives = 58/79 (73.42%), Query Frame = 3
Query:    3 NGTPRG*EKAQKLLMLFRQQRRDESP---AEAHECPPESSDLSVPPAEMKPLCKSMTRRKMGKGFGFFWRSKSYSVYQC 230
            NGT RG EKAQKLLMLFR+QR+ + P   AE      ESS  ++P  E KPLCKS++RRKMGK   FFW+SKSYSVYQC
Sbjct:  696 NGTIRGKEKAQKLLMLFREQRQRDQPQPPAEVRFQRAESSSKAMPAQESKPLCKSVSRRKMGKALSFFWKSKSYSVYQC 774          
BLAST of EX570068 vs. TrEMBL
Match: B9HT95_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_726064 PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.759e-19
Identity = 52/88 (59.09%), Postives = 59/88 (67.05%), Query Frame = 3
Query:    3 NGTPRG*EKAQKLLMLFRQQR------------RDESPAEAHECPPESSDLSVPPAEMKPLCKSMTRRKMGKGFGFFWRSKSYSVYQC 230
            NGT RG EKAQKLLMLFR+QR            RD+S AE      ESS +S+P  E KPLCKS++RRKMGK    FW+SKSYSVYQC
Sbjct:  699 NGTTRGKEKAQKLLMLFREQRQRDQPSAEVHFQRDQSSAEVRFQRIESSSMSMPAPETKPLCKSVSRRKMGKAISVFWKSKSYSVYQC 786          
BLAST of EX570068 vs. TrEMBL
Match: B9HL82_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_803799 PE=4 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.060e-18
Identity = 50/77 (64.94%), Postives = 56/77 (72.73%), Query Frame = 3
Query:    3 NGTPRG*EKAQKLLMLFRQQR-RDESPAEAHECPPESSDLSVPPAEMKPLCKSMTRRKMGKGFGFFWRSKSYSVYQC 230
            NGT RG EKAQKLLMLFR+QR RD+  AE      ESS  S+P  E KP CK ++RRKMGK   FFW+SKSYSVYQC
Sbjct:  699 NGTTRGKEKAQKLLMLFREQRQRDQPSAEVCFQRTESSSKSMPAPESKPQCKPVSRRKMGKAISFFWKSKSYSVYQC 775          
BLAST of EX570068 vs. TrEMBL
Match: A5C9K5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036163 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.433e-15
Identity = 47/91 (51.65%), Postives = 56/91 (61.54%), Query Frame = 3
Query:    3 NGTPRG*EKAQKLLMLFRQQR-RDESPAEA--------------HECPPESSDLSVPPAEMKPLCKSMTRRKMGKGFGFFWRSKSYSVYQC 230
            NGT RG EKAQKLLMLFR+QR RD SP  +                 P ES  L   P E KP CKS++RRK+GK + + W+SK+YSVYQC
Sbjct:  693 NGTVRGKEKAQKLLMLFREQRQRDPSPVGSPHHTESSTEAVPGPESKPLESKALETKPLESKPYCKSISRRKVGKAWNYLWKSKNYSVYQC 783          
BLAST of EX570068 vs. TrEMBL
Match: D7KBV1_ARALY (U-box domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_890324 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.135e-12
Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 3
Query:    3 NGTPRG*EKAQKLLMLFRQQRRDESPAEAHECPPESSDLSVPP----------AEMKPLCKSMTRRKMGKGFGFFWRSKSYSVYQC 230
            NGT RG E+AQKLL LFR+ R+ +   + H   P+ ++++ P            E KP CKS +R+KMG+ F F W+SKS+SVYQC
Sbjct:  686 NGTQRGRERAQKLLTLFRELRQRD---QTHLTEPQHTEVTSPEDGFSVAAAAVTESKPQCKSASRKKMGRAFSFLWKSKSFSVYQC 768          
BLAST of EX570068 vs. TrEMBL
Match: D7KAP1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_472912 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.367e-10
Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = 3
Query:    3 NGTPRG*EKAQKLLMLFRQQR--------RDESPAEAHECPPE-SSDLSVPPAEMKPLCKSMTRRK-MGKGFGFFWRSKSYSVY 224
            NG+PRG +K+QKLLMLFR+QR        RDE+P +    P    + +S P +E+KPL KS++RRK M + F F W+ KSYS++
Sbjct:  682 NGSPRGRDKSQKLLMLFREQRQRDQPSPKRDEAPRKTVSAPMAIPAPVSAPESEVKPLTKSISRRKTMTRPFSFLWK-KSYSIH 764          
BLAST of EX570068 vs. TrEMBL
Match: D7KVL0_ARALY (Armadillo/beta-catenin repeat family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_315769 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.100e-7
Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = 3
Query:    3 NGTPRG*EKAQKLLMLFRQQRRD-ESPAEAHECPPE----------------SSDLSVPPAEMKP--LCKSMTRRK-MGKGFGFFWRSKSYSV 221
            NGTPRG EK+QKLLMLFR+QR+  + P+   + PP+                S+  S P  + +P  L KSM+RRK + + F F W+ KSYSV
Sbjct:  694 NGTPRGREKSQKLLMLFREQRQQRDQPSPNRDKPPQKEPPRKSLSAPMSVHGSNPASAPVPDYEPRFLSKSMSRRKSLARPFSFLWK-KSYSV 785          
BLAST of EX570068 vs. TrEMBL
Match: D5A903_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.436e-7
Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 3
Query:    3 NGTPRG*EKAQKLLMLFRQQRRDESPAEAHE--CPPESSDLSVPPAEMKPLCKSMTRRKMGKGFGFFWRSKSYSVYQC 230
            NG+PRG +KAQKLL  FR+QR+ +   ++    C P++S       E K   ++ T +K+G+    FW+SKS++ YQC
Sbjct:  295 NGSPRGRDKAQKLLQHFREQRQRDVSCQSSTAVCTPQTSIYGESLKEKKTTHRT-TSKKIGRTLSLFWKSKSFAFYQC 371          
BLAST of EX570068 vs. SwissProt
Match: PUB45_ARATH (U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.285e-14
Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 3
Query:    3 NGTPRG*EKAQKLLMLFRQQR-RDES----PAEAHECPPES--SDLSVPPAEMKPLCKSMTRRKMGKGFGFFWRSKSYSVYQC 230
            NGT RG E+AQKLL LFR+ R RD++    P       PE   S  S    E KP CKS +R+KMG+ F F W+SKS+SVYQC
Sbjct:  686 NGTQRGRERAQKLLTLFRELRQRDQTHLTEPQHTEVTSPEDGFSVASAAVTETKPQCKSASRKKMGRAFSFLWKSKSFSVYQC 768          
BLAST of EX570068 vs. SwissProt
Match: PUB6_ARATH (U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.563e-11
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 3
Query:    3 NGTPRG*EKAQKLLMLFRQQRRDESPAEAHECPPES---------SDLSVPPAEMKPLCKSMTRRK-MGKGFGFFWRSKSYSVY 224
            NG+PRG +K+QKLLMLFR+QR  + P+   E  P           + +S P +E+KPL KS++RRK M + F F W+ KS+S++
Sbjct:  688 NGSPRGRDKSQKLLMLFREQRHRDQPSPNKEEAPRKTVSAPMAIPAPVSAPESEVKPLTKSISRRKTMTRPFSFLWK-KSHSIH 770          
BLAST of EX570068 vs. SwissProt
Match: PUB7_ARATH (U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7 PE=1 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.426e-9
Identity = 45/93 (48.39%), Postives = 54/93 (58.06%), Query Frame = 3
Query:    3 NGTPRG*EKAQKLLMLFRQQR--RDESPAEAHECP---PESSDLSVP-------PA-------EMKPLCKSMTRRK-MGKGFGFFWRSKSYSV 221
            NGTPRG EK+QKLLMLFR++R  RD+  +   E P   P    LS P       PA       E + L KSM+RRK M + F FFW+ KSYSV
Sbjct:  689 NGTPRGREKSQKLLMLFREERQQRDQPSSNRDEPPQKEPARKSLSAPLSVHGSTPASASVQDYEPRVLSKSMSRRKSMARPFSFFWK-KSYSV 780          
BLAST of EX570068 vs. TAIR peptide
Match: AT1G27910.1 (| Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:9720962-9723975 REVERSE LENGTH=768)

HSP 1 Score: 76.6406 bits (187), Expect = 5.116e-15
Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 3
Query:    3 NGTPRG*EKAQKLLMLFRQQR-RDES----PAEAHECPPES--SDLSVPPAEMKPLCKSMTRRKMGKGFGFFWRSKSYSVYQC 230
            NGT RG E+AQKLL LFR+ R RD++    P       PE   S  S    E KP CKS +R+KMG+ F F W+SKS+SVYQC
Sbjct:  686 NGTQRGRERAQKLLTLFRELRQRDQTHLTEPQHTEVTSPEDGFSVASAAVTETKPQCKSASRKKMGRAFSFLWKSKSFSVYQC 768          
BLAST of EX570068 vs. TAIR peptide
Match: AT1G24330.1 (| Symbols: | ARM repeat superfamily protein | chr1:8631779-8634835 FORWARD LENGTH=771)

HSP 1 Score: 65.855 bits (159), Expect = 9.030e-12
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 3
Query:    3 NGTPRG*EKAQKLLMLFRQQRRDESPAEAHECPPES---------SDLSVPPAEMKPLCKSMTRRK-MGKGFGFFWRSKSYSVY 224
            NG+PRG +K+QKLLMLFR+QR  + P+   E  P           + +S P +E+KPL KS++RRK M + F F W+ KS+S++
Sbjct:  688 NGSPRGRDKSQKLLMLFREQRHRDQPSPNKEEAPRKTVSAPMAIPAPVSAPESEVKPLTKSISRRKTMTRPFSFLWK-KSHSIH 770          
BLAST of EX570068 vs. TAIR peptide
Match: AT1G67530.2 (| Symbols: | ARM repeat superfamily protein | chr1:25308229-25311081 FORWARD LENGTH=782)

HSP 1 Score: 61.6178 bits (148), Expect = 1.703e-10
Identity = 45/93 (48.39%), Postives = 54/93 (58.06%), Query Frame = 3
Query:    3 NGTPRG*EKAQKLLMLFRQQR--RDESPAEAHECP---PESSDLSVP-------PA-------EMKPLCKSMTRRK-MGKGFGFFWRSKSYSV 221
            NGTPRG EK+QKLLMLFR++R  RD+  +   E P   P    LS P       PA       E + L KSM+RRK M + F FFW+ KSYSV
Sbjct:  689 NGTPRGREKSQKLLMLFREERQQRDQPSSNRDEPPQKEPARKSLSAPLSVHGSTPASASVQDYEPRVLSKSMSRRKSMARPFSFFWK-KSYSV 780          
BLAST of EX570068 vs. TAIR peptide
Match: AT1G67530.1 (| Symbols: | ARM repeat superfamily protein | chr1:25308229-25311081 FORWARD LENGTH=782)

HSP 1 Score: 61.6178 bits (148), Expect = 1.703e-10
Identity = 45/93 (48.39%), Postives = 54/93 (58.06%), Query Frame = 3
Query:    3 NGTPRG*EKAQKLLMLFRQQR--RDESPAEAHECP---PESSDLSVP-------PA-------EMKPLCKSMTRRK-MGKGFGFFWRSKSYSV 221
            NGTPRG EK+QKLLMLFR++R  RD+  +   E P   P    LS P       PA       E + L KSM+RRK M + F FFW+ KSYSV
Sbjct:  689 NGTPRGREKSQKLLMLFREERQQRDQPSSNRDEPPQKEPARKSLSAPLSVHGSTPASASVQDYEPRVLSKSMSRRKSMARPFSFFWK-KSYSV 780          
The following BLAST results are available for this feature:
BLAST of EX570068 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 8
Match NameE-valueIdentityDescription
B9RMH5_RICCO3.644e-1963.29Ubiquitin-protein ligase, putative OS=Ricinus comm... [more]
B9HT95_POPTR4.759e-1959.09Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HL82_POPTR1.060e-1864.94Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5C9K5_VITVI1.433e-1551.65Putative uncharacterized protein OS=Vitis vinifera... [more]
D7KBV1_ARALY1.135e-1245.35U-box domain-containing protein OS=Arabidopsis lyr... [more]
D7KAP1_ARALY2.367e-1047.62Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7KVL0_ARALY1.100e-743.01Armadillo/beta-catenin repeat family protein OS=Ar... [more]
D5A903_PICSI1.436e-739.74Putative uncharacterized protein OS=Picea sitchens... [more]
back to top
BLAST of EX570068 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
PUB45_ARATH4.285e-1451.81U-box domain-containing protein 45 OS=Arabidopsis ... [more]
PUB6_ARATH7.563e-1144.05U-box domain-containing protein 6 OS=Arabidopsis t... [more]
PUB7_ARATH1.426e-948.39U-box domain-containing protein 7 OS=Arabidopsis t... [more]
back to top
BLAST of EX570068 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G27910.15.116e-1551.81| Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:... [more]
AT1G24330.19.030e-1244.05| Symbols: | ARM repeat superfamily protein | chr... [more]
AT1G67530.21.703e-1048.39| Symbols: | ARM repeat superfamily protein | chr... [more]
AT1G67530.11.703e-1048.39| Symbols: | ARM repeat superfamily protein | chr... [more]
back to top
Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570068 ID=EX570068; Name=EX570068; organism=Pisum sativum; type=EST; length=416bp
TGAATGGGACCCCAAGAGGATAAGAAAAAGCTCAGAAACTCCTGATGCTG
TTCCGACAGCAGCGACGAGATGAATCACCTGCTGAGGCTCACGAGTGTCC
TCCTGAAAGTAGTGATTTGTCTGTGCCTCCTGCTGAAATGAAACCTTTAT
GTAAGTCGATGACTAGAAGAAAGATGGGGAAAGGTTTTGGCTTTTTCTGG
AGAAGCAAGAGCTATTCCGTGTACCAGTGCTGAAGTTCAGTAGGTTGTAA
ATATCTGTTTTATATCCCTTTGCCCTTCATGTGTTTCTGTGGGTTTAGCT
TACTTTTTAGTTTCGAAAGCGAAGAAAAGTTGTACATGCCTGTGTAATTT
ATGGATTTTGTTTTCTTCATTCGCTTTTCTCTTTGTAACATAAATTTCTC
CAATCATAAGTGTTGG
back to top