GH719204

EST Overview
NameGH719204
Unique NameGH719204
TypeEST
OrganismPisum sativum (pea)
Sequence length290
Libraries
Library NameType
LIBEST_014003 TEcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of GH719204 vs. TrEMBL
Match: B7FGP8_MEDTR (Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.211e-15
Identity = 47/74 (63.51%), Postives = 53/74 (71.62%), Query Frame = -1
Query:   21 INKTQQIEQ*AFLHLQSVFGNVIIWVIKLPFYLSMGKLFGLNRLNFWSMERRVTTVLAPTNTTCRLKILLSKMT 242
            +N TQQ+E     H  S   N +I VIKLPFYLS GK FGLN LNFWSM+RRVTT+  PTN +CRLKIL  KMT
Sbjct:    1 MNITQQLE-----HRHSSTYN-LIRVIKLPFYLSTGKSFGLNFLNFWSMKRRVTTIFPPTNPSCRLKILFHKMT 68          
BLAST of GH719204 vs. TrEMBL
Match: C6T2A2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.649e-11
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 3
Query:   24 HLAQQYLESTRGIGWGKDGRHPSLHGPKVEPVESE 128
            HL  QYLESTRGIGWGKDGRHPSLH PKV+PVESE
Sbjct:   72 HLVNQYLESTRGIGWGKDGRHPSLHAPKVDPVESE 106          
BLAST of GH719204 vs. TrEMBL
Match: A5AT60_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026325 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.050e-10
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 3
Query:   24 HLAQQYLESTRGIGWGKDGRHPSLHGPKVEPVESE 128
            HL QQYL++TRGIGWGKDGRHPSLHGPKVE  ESE
Sbjct:   72 HLVQQYLDATRGIGWGKDGRHPSLHGPKVE-AESE 105          
BLAST of GH719204 vs. TrEMBL
Match: B9T595_RICCO (NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial, putative OS=Ricinus communis GN=RCOM_0200060 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.439e-9
Identity = 29/35 (82.86%), Postives = 30/35 (85.71%), Query Frame = 3
Query:   24 HLAQQYLESTRGIGWGKDGRHPSLHGPKVEPVESE 128
            HL QQYL+STRGIGWGKD R PSLHGPKVE  ESE
Sbjct:   72 HLVQQYLDSTRGIGWGKDQRPPSLHGPKVEVAESE 106          
BLAST of GH719204 vs. TrEMBL
Match: Q94C12_ARATH (AT3g18410/MYF24_12 OS=Arabidopsis thaliana GN=At3g18410 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.887e-7
Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 3
Query:   24 HLAQQYLESTRGIGWGKDGRHPSLHGPKVEPVESE 128
            HL QQYL+STRG+GWGKD R  SLHGPK E VE+E
Sbjct:   72 HLVQQYLDSTRGVGWGKDHRPISLHGPKPEAVEAE 106          
BLAST of GH719204 vs. TrEMBL
Match: D7L8H8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479342 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.887e-7
Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 3
Query:   24 HLAQQYLESTRGIGWGKDGRHPSLHGPKVEPVESE 128
            HL QQYL+STRG+GWGKD R  SLHGPK E VE+E
Sbjct:   72 HLVQQYLDSTRGVGWGKDHRPISLHGPKPEAVEAE 106          
BLAST of GH719204 vs. TrEMBL
Match: A9PC01_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_823292 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.464e-7
Identity = 28/36 (77.78%), Postives = 29/36 (80.56%), Query Frame = 3
Query:   24 HLAQQYLESTRGIGWGKDGRHPSLHGPKVE-PVESE 128
            HL QQYL+STRGIGWGKD R P LHGPKVE   ESE
Sbjct:   72 HLVQQYLDSTRGIGWGKDQRPPCLHGPKVEATAESE 107          
BLAST of GH719204 vs. TrEMBL
Match: A9P8N3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_680876 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.170e-7
Identity = 27/36 (75.00%), Postives = 28/36 (77.78%), Query Frame = 3
Query:   24 HLAQQYLESTRGIGWGKDGRHPSLHGPKVE-PVESE 128
            H  QQYL+STRGIGWGKD R P LHGPKVE   ESE
Sbjct:   72 HFVQQYLDSTRGIGWGKDQRPPCLHGPKVEATAESE 107          
BLAST of GH719204 vs. SwissProt
Match: NDUS6_ARATH (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6 OS=Arabidopsis thaliana GN=At1g49140 PE=3 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 6.761e-7
Identity = 23/33 (69.70%), Postives = 26/33 (78.79%), Query Frame = 3
Query:   24 HLAQQYLESTRGIGWGKDGRHPSLHGPKVEPVE 122
            HL QQYL++TRG+GWGKD R  SLHGPK   VE
Sbjct:   72 HLVQQYLDATRGVGWGKDHRPISLHGPKPVAVE 104          
BLAST of GH719204 vs. TAIR peptide
Match: AT3G18410.2 (| Symbols: | Complex I subunit NDUFS6 | chr3:6323203-6323761 FORWARD LENGTH=106)

HSP 1 Score: 58.9214 bits (141), Expect = 7.418e-10
Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 3
Query:   24 HLAQQYLESTRGIGWGKDGRHPSLHGPKVEPVESE 128
            HL QQYL+STRG+GWGKD R  SLHGPK E VE+E
Sbjct:   72 HLVQQYLDSTRGVGWGKDHRPISLHGPKPEAVEAE 106          
BLAST of GH719204 vs. TAIR peptide
Match: AT3G18410.1 (| Symbols: | Complex I subunit NDUFS6 | chr3:6323203-6323761 FORWARD LENGTH=106)

HSP 1 Score: 58.9214 bits (141), Expect = 7.418e-10
Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 3
Query:   24 HLAQQYLESTRGIGWGKDGRHPSLHGPKVEPVESE 128
            HL QQYL+STRG+GWGKD R  SLHGPK E VE+E
Sbjct:   72 HLVQQYLDSTRGVGWGKDHRPISLHGPKPEAVEAE 106          
BLAST of GH719204 vs. TAIR peptide
Match: AT1G49140.1 (| Symbols: | Complex I subunit NDUFS6 | chr1:18177696-18178269 REVERSE LENGTH=107)

HSP 1 Score: 52.7582 bits (125), Expect = 5.316e-8
Identity = 23/33 (69.70%), Postives = 26/33 (78.79%), Query Frame = 3
Query:   24 HLAQQYLESTRGIGWGKDGRHPSLHGPKVEPVE 122
            HL QQYL++TRG+GWGKD R  SLHGPK   VE
Sbjct:   72 HLVQQYLDATRGVGWGKDHRPISLHGPKPVAVE 104          
The following BLAST results are available for this feature:
BLAST of GH719204 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 8
Match NameE-valueIdentityDescription
B7FGP8_MEDTR3.211e-1563.51Putative uncharacterized protein (Fragment) OS=Med... [more]
C6T2A2_SOYBN1.649e-1188.57Putative uncharacterized protein OS=Glycine max PE... [more]
A5AT60_VITVI9.050e-1085.71Putative uncharacterized protein OS=Vitis vinifera... [more]
B9T595_RICCO3.439e-982.86NADH-ubiquinone oxidoreductase 12 kDa subunit, mit... [more]
Q94C12_ARATH1.887e-774.29AT3g18410/MYF24_12 OS=Arabidopsis thaliana GN=At3g... [more]
D7L8H8_ARALY1.887e-774.29Putative uncharacterized protein OS=Arabidopsis ly... [more]
A9PC01_POPTR2.464e-777.78Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9P8N3_POPTR7.170e-775.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of GH719204 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
NDUS6_ARATH6.761e-769.70NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
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BLAST of GH719204 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT3G18410.27.418e-1074.29| Symbols: | Complex I subunit NDUFS6 | chr3:6323... [more]
AT3G18410.17.418e-1074.29| Symbols: | Complex I subunit NDUFS6 | chr3:6323... [more]
AT1G49140.15.316e-869.70| Symbols: | Complex I subunit NDUFS6 | chr1:1817... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GH719204 ID=GH719204; Name=GH719204; organism=Pisum sativum; type=EST; length=290bp
TCGAGCGGCGCCCGGGCAGGTGTCATCTTGCTCAACAGTATCTTGAGTCT
ACACGTGGTATTGGTTGGGGCAAGGACGGTCGTCACCCTTCTCTCCATGG
ACCAAAAGTTGAGCCTGTTGAGTCCGAATAATTTCCCCATGGATAAATAA
AAGGGAAGTTTTATTACCCAAATGATGACATTGCCAAAAACAGATTGTAG
GTGGAGGAATGCCTATTGTTCAATCTGTTGTGTTTTGTTAATTTTCCATA
GTCAGATTTCCTGTGAACTACAATTGTATTTCGCCTTGAG
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