AM161913

EST Overview
NameAM161913
Unique NameAM161913
TypeEST
OrganismPisum sativum (pea)
Sequence length271
Libraries
Library NameType
LIBEST_019360 Pisum sativum leaf vegetativecdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
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BLAST of AM161913 vs. Lotus protein
Match: chr4.CM0244.1060.r2.m (- phase: 0 )

HSP 1 Score: 59.3066 bits (142), Expect = 3.799e-10
Identity = 39/81 (48.15%), Postives = 43/81 (53.09%), Query Frame = -3 
Query:   57 LMPLDLNQD-QNH------NHLXXXXXXXXXXXXSYPNPPEQVRQEPSYYFETKHDPEEVEKT---IPSSGSWNSSTPENH 269
            LMPLDLNQD QNH      NHL               NPP+Q  QE SY +E KH P E E     IPSSGSW++S  E H
Sbjct:   13 LMPLDLNQDDQNHDELFSPNHLVASSSFSSISYPILFNPPDQ-DQEGSYCWEPKHSPNEEEDEKIIIPSSGSWDNSAAEKH 92
[Close]
BLAST of AM161913 vs. Soybean peptides
Match: Glyma13g00200.1|PACid:16289186 ()

HSP 1 Score: 55.0694 bits (131), Expect = 1.650e-8
Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = -3 
Query:    3 MPLDLNQDQNHNH---LXXXXXXXXXXXXSYP---NPPEQVRQEPSYYFET-KHDP---EEVEKTIPSSGSWNSSTPENHETVELNTSLQFVGRKKKL 266
            MPLDLN+DQNH     +            SYP   NPP Q ++  SY +ET KH P   EE EK IP+SGSW     E +E +  + S++++  K ++
Sbjct:    1 MPLDLNEDQNHEFFSPIHHPSSSFSSLSSSYPILFNPPNQDQEARSYDWETTKHLPSHEEEAEKIIPTSGSWVWRKEERNENLAEDGSVKWMPSKMRI 98
[Close]
BLAST of AM161913 vs. Soybean peptides
Match: Glyma17g06290.1|PACid:16304606 ()

HSP 1 Score: 53.9138 bits (128), Expect = 3.677e-8
Identity = 35/80 (43.75%), Postives = 42/80 (52.50%), Query Frame = -3 
Query:   60 LMPLDLNQDQNHNHLXXXXXXXXXXXXS--YP---NPPEQVRQEPSYYFE-TKH----DPEEVEKTIPSSGSWNSSTPEN 269
            +MPLDLN+DQNH                  YP   NPP Q ++  SYY+E TK       EE EK IPSSGSW+ S  E+
Sbjct:   12 VMPLDLNEDQNHEFFSPTHHPSSSFSSLSSYPILFNPPNQDQEARSYYWEPTKQYLPSHEEETEKIIPSSGSWDHSVAES 91
The following BLAST results are available for this feature:
BLAST of AM161913 vs. Lotus protein
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins)
Total hits: 1
Match NameE-valueIdentityDescription
chr4.CM0244.1060.r2.m3.799e-1048.15- phase: 0 [more]
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BLAST of AM161913 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides)
Total hits: 2
Match NameE-valueIdentityDescription
Glyma13g00200.1|PACid:162891861.650e-838.78[more]
Glyma17g06290.1|PACid:163046063.677e-843.75[more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..27
score
NoneNo IPR availableSEGsegsegcoord: 16..28
score

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..27
score
NoneNo IPR availableSEGsegsegcoord: 16..28
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>AM161913 ID=AM161913; Name=AM161913; organism=Pisum sativum; type=EST; length=271bp
ACTAGTTTCTTCTTTCTTCCAACGAATTGTAAGCTTGTGTTTAATTCTAC
CGTCTCATGGTTTTCTGGAGTTGAAGAATTCCATGATCCACTTGATGGAA
TAGTCTTCTCAACCTCTTCAGGATCATGCTTTGTTTCGAAGTAATAAGAC
GGTTCTTGTCGAACTTGTTCCGGCGGGTTAGGATAAGATGATGATGGAGA
AGAAAATGAAGAAGAAGAAGAAGAAAGATGATTATGGTTTTGATCTTGAT
TAAGATCTAGAGGCATAAGGT
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