EX570235
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX570235 vs. TrEMBL
Match: A6BLP0_IPONI (70 kDa subunit of replication protein A OS=Ipomoea nil GN=RPA70 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.060e-10 Identity = 29/44 (65.91%), Postives = 38/44 (86.36%), Query Frame = -3 Query: 2 MAKSVTPNAISTLQANPCPDSSSDLPDIVLQVLDLKHSGNRYMF 133 M +SVTP+AIS + ANP PDS SDLP++++QV+DLK +GNRYMF Sbjct: 1 MERSVTPDAISAILANPSPDSGSDLPELIVQVVDLKQAGNRYMF 44
BLAST of EX570235 vs. TrEMBL
Match: D7SHZ9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007849001 PE=4 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 4.576e-9 Identity = 28/44 (63.64%), Postives = 37/44 (84.09%), Query Frame = -3 Query: 2 MAKSVTPNAISTLQANPCPDSSSDLPDIVLQVLDLKHSGNRYMF 133 MAKS+TPN IST+ +NP PDSS++LP+I++QV+DL GNRY F Sbjct: 1 MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIGNRYKF 44
BLAST of EX570235 vs. TrEMBL
Match: A5AJR8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006284 PE=4 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 4.576e-9 Identity = 28/44 (63.64%), Postives = 37/44 (84.09%), Query Frame = -3 Query: 2 MAKSVTPNAISTLQANPCPDSSSDLPDIVLQVLDLKHSGNRYMF 133 MAKS+TPN IST+ +NP PDSS++LP+I++QV+DL GNRY F Sbjct: 1 MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIGNRYKF 44
BLAST of EX570235 vs. TrEMBL
Match: D7MUG5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496254 PE=4 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 9.542e-7 Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = -3 Query: 2 MAKSVTPNAISTLQANPCPDSSSDLPDIVLQVLDLKHSGNRYMF 133 M SVTP+AIST+ +NP DSSS+ P+IV+QV+DLK GNRY F Sbjct: 1 MQTSVTPDAISTVLSNPSFDSSSERPEIVVQVVDLKPIGNRYTF 44
BLAST of EX570235 vs. TAIR peptide
Match: AT5G61000.1 (| Symbols: RPA70D, ATRPA70D | Replication factor-A protein 1-related | chr5:24549682-24552641 REVERSE LENGTH=629) HSP 1 Score: 55.0694 bits (131), Expect = 1.068e-8 Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = -3 Query: 2 MAKSVTPNAISTLQANPCPDSSSDLPDIVLQVLDLKHSGNRYMF 133 M SVTP+AIST+ +NP DSSSD +IV+QV+DLK GNRY F Sbjct: 1 MQTSVTPDAISTVLSNPSFDSSSDRSEIVVQVVDLKPIGNRYTF 44
BLAST of EX570235 vs. TAIR peptide
Match: AT5G08020.1 (| Symbols: ATRPA70B, RPA70B | RPA70-kDa subunit B | chr5:2572107-2574879 FORWARD LENGTH=604) HSP 1 Score: 48.9062 bits (115), Expect = 7.655e-7 Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = -3 Query: 2 MAKSVTPNAISTLQANPCPDSSSDLPDIVLQVLDLKHSGNRYMF 133 M SVT + I+T+ AN DSSS P+IV+QV+DLK +GNRY F Sbjct: 1 MENSVTQDGIATVLANQSLDSSSVRPEIVVQVVDLKPAGNRYTF 44 The following BLAST results are available for this feature:
BLAST of EX570235 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 4
BLAST of EX570235 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX570235 ID=EX570235; Name=EX570235; organism=Pisum sativum; type=EST; length=330bpback to top |