EX570419
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX570419 vs. TrEMBL
Match: Q8H1A3_PEA (Mini-chromosome maintenance protein MCM6 OS=Pisum sativum GN=mcm6 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 4.851e-19 Identity = 52/67 (77.61%), Postives = 52/67 (77.61%), Query Frame = 3 Query: 3 NYSSIEEAKTEVSQIKAIIEILIRREGHLIVVDDGRQXXXXXXXXXXXXXXXRNDRILAVAPHYVVD 203 NYSSIEEAKTEVSQIKAIIEILIRREGHLIVVDDGRQ RNDRILAVAPHYVVD Sbjct: 761 NYSSIEEAKTEVSQIKAIIEILIRREGHLIVVDDGRQAAAEAAGAEQTESAARNDRILAVAPHYVVD 827
BLAST of EX570419 vs. TrEMBL
Match: Q45NK0_MEDSA (Mini-chromosome maintenance protein (Fragment) OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.556e-16 Identity = 45/67 (67.16%), Postives = 49/67 (73.13%), Query Frame = 3 Query: 3 NYSSIEEAKTEVSQIKAIIEILIRREGHLIVVDDGRQXXXXXXXXXXXXXXXRNDRILAVAPHYVVD 203 NYSS+EEAK E+SQIKAIIEILIRREGHLIV+DDGRQ RNDR LAVAP+YV D Sbjct: 133 NYSSVEEAKVEISQIKAIIEILIRREGHLIVIDDGRQAASEAAGAEQSESAARNDRTLAVAPNYVGD 199
BLAST of EX570419 vs. TrEMBL
Match: D7TFY9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_184.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003253001 PE=4 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.015e-14 Identity = 44/67 (65.67%), Postives = 49/67 (73.13%), Query Frame = 3 Query: 3 NYSSIEEAKTEVSQIKAIIEILIRREGHLIVVDDGRQXXXXXXXXXXXXXXXRNDRILAVAPHYVVD 203 NYSS+EEA EVS++KAIIE LIRREGHLIVVDDGRQ RNDRILAVAP+YV+D Sbjct: 757 NYSSMEEAANEVSKLKAIIESLIRREGHLIVVDDGRQ-AAAEGEDGRPPSVSRNDRILAVAPNYVID 822
BLAST of EX570419 vs. TrEMBL
Match: A5BY30_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029723 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.015e-14 Identity = 44/67 (65.67%), Postives = 49/67 (73.13%), Query Frame = 3 Query: 3 NYSSIEEAKTEVSQIKAIIEILIRREGHLIVVDDGRQXXXXXXXXXXXXXXXRNDRILAVAPHYVVD 203 NYSS+EEA EVS++KAIIE LIRREGHLIVVDDGRQ RNDRILAVAP+YV+D Sbjct: 742 NYSSMEEAANEVSKLKAIIESLIRREGHLIVVDDGRQ-AAAEGEDGRPPSVSRNDRILAVAPNYVID 807
BLAST of EX570419 vs. TrEMBL
Match: B9T7E5_RICCO (Minichromosome maintenance protein, putative OS=Ricinus communis GN=RCOM_0133060 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.851e-11 Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 3 Query: 3 NYSSIEEAKTEVSQIKAIIEILIRREGHLIVVDDGRQXXXXXXXXXXXXXXXRNDRILAVAPHYVVD 203 +YSS+EEAK E +++KAIIE LIRREG+LIVVDDGRQ R++RILAVAP+YVV+ Sbjct: 649 SYSSVEEAKNEATKVKAIIESLIRREGYLIVVDDGRQ--PDAEGEGARQSVSRDNRILAVAPNYVVE 713
BLAST of EX570419 vs. TrEMBL
Match: B9GMZ6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_797236 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.021e-10 Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 3 Query: 3 NYSSIEEAKTEVSQIKAIIEILIRREGHLIVVDDGRQXXXXXXXXXXXXXXXRNDRILAVAPHYVVD 203 +YSS+EEAK E S+IKAIIE LIRREG LIVVDDG + R+DRIL VAP+Y+V+ Sbjct: 778 SYSSLEEAKNEASKIKAIIESLIRREGFLIVVDDGSR--PEAEGDGARQSSSRDDRILVVAPNYLVE 842
BLAST of EX570419 vs. TAIR peptide
Match: AT5G44635.1 (| Symbols: MCM6 | minichromosome maintenance (MCM2/3/5) family protein | chr5:18006431-18010542 REVERSE LENGTH=831) HSP 1 Score: 50.8322 bits (120), Expect = 3.858e-7 Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 3 Query: 6 YSSIEEAKTEVSQIKAIIEILIRREGHLIVVDDGRQXXXXXXXXXXXXXXXRNDRILAVAPHYVVD 203 YSS E+ K ++ +++AIIE L+ +EGHLIV+ + Q R++RILAVAP+YV++ Sbjct: 767 YSSQEQVKLDIKKLRAIIESLVCKEGHLIVLAN-EQEEAAEAEETKKKSSQRDERILAVAPNYVIE 831 The following BLAST results are available for this feature:
BLAST of EX570419 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 6
BLAST of EX570419 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX570419 ID=EX570419; Name=EX570419; organism=Pisum sativum; type=EST; length=466bpback to top |