FG534101

EST Overview
NameFG534101
Unique NameFG534101
TypeEST
OrganismPisum sativum (pea)
Sequence length607
Libraries
Library NameType
LIBEST_023216 MeriT Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG534101 vs. TrEMBL
Match: Q52ZI9_PEA (SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 a OS=Pisum sativum GN=SOC1a PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.108e-30
Identity = 72/87 (82.76%), Postives = 72/87 (82.76%), Query Frame = 1
Query:    4 QLEKSVSTVRARKNQVYKNQIEQLKEKEKVLLAENSRLSKXXXXXXXXXXXXXXXNDHPRENQPYAESSSPSSDVVTELFIGLHRSS 264
            QLEKSVSTVRARKNQVYKNQIEQLKEKEKVLLAENSRLSK               NDHPRENQPYAESSSPSSDVVTELFIGLHRSS
Sbjct:  130 QLEKSVSTVRARKNQVYKNQIEQLKEKEKVLLAENSRLSKQPQPQLLQLPPPPPPNDHPRENQPYAESSSPSSDVVTELFIGLHRSS 216          
BLAST of FG534101 vs. TrEMBL
Match: Q52ZP9_PEA (Suppressor of CONSTANS 1a (Fragment) OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.739e-28
Identity = 69/87 (79.31%), Postives = 69/87 (79.31%), Query Frame = 1
Query:    4 QLEKSVSTVRARKNQVYKNQIEQLKEKEKVLLAENSRLSKXXXXXXXXXXXXXXXNDHPRENQPYAESSSPSSDVVTELFIGLHRSS 264
            QLEK VSTVRARK QVYK QIEQLKEKEKVLLAENSRLSK               NDHPRENQPYAESSSPSSDVVTELFIGLHRSS
Sbjct:   85 QLEKCVSTVRARKYQVYKYQIEQLKEKEKVLLAENSRLSKQPQPQLLQLPPPPPPNDHPRENQPYAESSSPSSDVVTELFIGLHRSS 171          
BLAST of FG534101 vs. TrEMBL
Match: A2Q6H8_MEDTR (Transcription factor, K-box OS=Medicago truncatula GN=MtrDRAFT_AC184047g8v2 PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.373e-20
Identity = 61/88 (69.32%), Postives = 66/88 (75.00%), Query Frame = 1
Query:    4 QLEKSVSTVRARKNQVYKNQIEQLKEKEKVLLAENSRLSKXXXXXXXXXXXXXXXNDHPREN-QPYAESSSPSSDVVTELFIGLHRSS 264
            QLEKSVS VRARKNQ YK+QI+QLKEKEK L+AEN+RLSK                DH RE+ QPYAE SSPSSDVVTELFIGLHRSS
Sbjct:   70 QLEKSVSVVRARKNQAYKHQIDQLKEKEKNLVAENARLSK----QPPQPQPQPTTKDHQREDQQPYAE-SSPSSDVVTELFIGLHRSS 152          
BLAST of FG534101 vs. TrEMBL
Match: A1XG54_SOYBN (SOC1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.596e-16
Identity = 52/86 (60.47%), Postives = 59/86 (68.60%), Query Frame = 1
Query:    4 QLEKSVSTVRARKNQVYKNQIEQLKEKEKVLLAENSRLSKXXXXXXXXXXXXXXXNDHPRENQPYAESSSPSSDVVTELFIGLHRS 261
            QLE+SVS VRARKNQVYK QI+QLKEKE+ L AEN+RL +                  P+E QPYAE SSPSS+V TELFIGL RS
Sbjct:  130 QLERSVSNVRARKNQVYKEQIDQLKEKERALYAENARLCE------QYGIQPQPATKDPKEIQPYAE-SSPSSEVETELFIGLPRS 208          
BLAST of FG534101 vs. TrEMBL
Match: B9RDH8_RICCO (Mads box protein, putative OS=Ricinus communis GN=RCOM_1612970 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.051e-13
Identity = 48/82 (58.54%), Postives = 54/82 (65.85%), Query Frame = 1
Query:    4 QLEKSVSTVRARKNQVYKNQIEQLKEKEKVLLAENSRLSKXXXXXXXXXXXXXXXNDHPRENQPYAESSSPSSDVVTELFIG 249
            QLEKSVS++RARKNQV+K QIEQLKEKEK L AEN+RLS+                    EN+PY E  SP SDV TELFIG
Sbjct:   70 QLEKSVSSIRARKNQVFKEQIEQLKEKEKQLAAENARLSEKCGVQALPGL------KEQEENRPY-EEGSPVSDVETELFIG 144          
BLAST of FG534101 vs. TrEMBL
Match: B7FN05_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.811e-13
Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 1
Query:    4 QLEKSVSTVRARKNQVYKNQIEQLKEKEKVLLAENSRLSKXXXXXXXXXXXXXXXNDHPRENQPYAESSSPSSDVVTELFIGL 252
            QLEKS++ +R +K +V++ QI+QLKEKEK L+AEN RLS+                ++  E +PYA+ SSPSSDV TELFIGL
Sbjct:  131 QLEKSINKIRVKKTKVFREQIDQLKEKEKALVAENVRLSE-KYGNYSTQESTKDQRENIAEVEPYADQSSPSSDVETELFIGL 212          
BLAST of FG534101 vs. TrEMBL
Match: D6PW22_MALDO (Suppressor of overexpression of constans 1-like c protein OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.896e-13
Identity = 47/87 (54.02%), Postives = 57/87 (65.52%), Query Frame = 1
Query:    1 HQLEKSVSTVRARKNQVYKNQIEQLKEKEKVLLAENSRLSKXXXXXXXXXXXXXXXNDHPRENQPYAESSSPSSDVVTELFIGLHRS 261
            HQLEKSV+ VRARK+QV+K QIEQL+EKEK+L AE +RL +                D  R+N  Y +SS+ SSDV TELFIGL  S
Sbjct:  131 HQLEKSVNNVRARKSQVFKEQIEQLREKEKLLKAETARLVEKCGSFQPRKTL-----DERRQNTTYTDSST-SSDVETELFIGLPES 211          
BLAST of FG534101 vs. TrEMBL
Match: D0VYC1_MALDO (SOC1 like protein OS=Malus domestica GN=MdSOC1b PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.896e-13
Identity = 47/87 (54.02%), Postives = 57/87 (65.52%), Query Frame = 1
Query:    1 HQLEKSVSTVRARKNQVYKNQIEQLKEKEKVLLAENSRLSKXXXXXXXXXXXXXXXNDHPRENQPYAESSSPSSDVVTELFIGLHRS 261
            HQLEKSV+ VRARK+QV+K QIEQL+EKEK+L AE +RL +                D  R+N  Y +SS+ SSDV TELFIGL  S
Sbjct:  131 HQLEKSVNNVRARKSQVFKEQIEQLREKEKLLKAETARLVEKCGSFQPRKTL-----DERRQNTTYTDSST-SSDVETELFIGLPES 211          
BLAST of FG534101 vs. TrEMBL
Match: A5X6G6_POPTO (MADS box transcription factor 5 OS=Populus tomentosa GN=MADS5 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.896e-13
Identity = 47/83 (56.63%), Postives = 54/83 (65.06%), Query Frame = 1
Query:    1 HQLEKSVSTVRARKNQVYKNQIEQLKEKEKVLLAENSRLSKXXXXXXXXXXXXXXXNDHPRENQPYAESSSPSSDVVTELFIG 249
            HQLE+SVST+RARKNQV+K QIE LK+KEK+L AEN+RLS                +D PRE Q     SS  SDV TELFIG
Sbjct:  129 HQLERSVSTIRARKNQVFKEQIELLKQKEKLLAAENTRLS-DECGAQSWPVSWEQRDDLPREEQ---RESSSISDVETELFIG 207          
BLAST of FG534101 vs. TrEMBL
Match: D0VYC0_MALDO (SOC1 like protein OS=Malus domestica GN=MdSOC1a PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.380e-12
Identity = 48/86 (55.81%), Postives = 55/86 (63.95%), Query Frame = 1
Query:    4 QLEKSVSTVRARKNQVYKNQIEQLKEKEKVLLAENSRLSKXXXXXXXXXXXXXXXNDHPRENQPYAESSSPSSDVVTELFIGLHRS 261
            QLEKSV  VRARK+QV+K QIEQL+EKEK+L AEN+RL +                   RE  PY ESS+ SSDV TELFIGL  S
Sbjct:  132 QLEKSVYNVRARKSQVFKEQIEQLREKEKLLTAENTRLVEKYGSFKKTL-------HERREKTPYNESST-SSDVETELFIGLPES 209          
BLAST of FG534101 vs. SwissProt
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.656e-12
Identity = 44/87 (50.57%), Postives = 52/87 (59.77%), Query Frame = 1
Query:    4 QLEKSVSTVRARKNQVYKNQIEQLKEKEKVLLAENSRLSKXXXXXXXXXXXXXXXNDHPRENQPYAESSSPSSDVVTELFIGLHRSS 264
            QLEKSV  +RARK QV+K QIEQLK+KEK L AEN +LS+               N +        E SSPSS+V T+LFIGL  SS
Sbjct:  130 QLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSE----KWGSHESEVWSNKNQESTGRGDEESSPSSEVETQLFIGLPCSS 212          
BLAST of FG534101 vs. TAIR peptide
Match: AT2G45660.1 (| Symbols: AGL20, SOC1, ATSOC1 | AGAMOUS-like 20 | chr2:18807799-18810193 REVERSE LENGTH=214)

HSP 1 Score: 72.0182 bits (175), Expect = 2.765e-13
Identity = 44/87 (50.57%), Postives = 52/87 (59.77%), Query Frame = 1
Query:    4 QLEKSVSTVRARKNQVYKNQIEQLKEKEKVLLAENSRLSKXXXXXXXXXXXXXXXNDHPRENQPYAESSSPSSDVVTELFIGLHRSS 264
            QLEKSV  +RARK QV+K QIEQLK+KEK L AEN +LS+               N +        E SSPSS+V T+LFIGL  SS
Sbjct:  130 QLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSE----KWGSHESEVWSNKNQESTGRGDEESSPSSEVETQLFIGLPCSS 212          
The following BLAST results are available for this feature:
BLAST of FG534101 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q52ZI9_PEA2.108e-3082.76SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 a OS=Pi... [more]
Q52ZP9_PEA5.739e-2879.31Suppressor of CONSTANS 1a (Fragment) OS=Pisum sati... [more]
A2Q6H8_MEDTR3.373e-2069.32Transcription factor, K-box OS=Medicago truncatula... [more]
A1XG54_SOYBN8.596e-1660.47SOC1 OS=Glycine max PE=2 SV=1[more]
B9RDH8_RICCO1.051e-1358.54Mads box protein, putative OS=Ricinus communis GN=... [more]
B7FN05_MEDTR6.811e-1350.60Putative uncharacterized protein OS=Medicago trunc... [more]
D6PW22_MALDO8.896e-1354.02Suppressor of overexpression of constans 1-like c ... [more]
D0VYC1_MALDO8.896e-1354.02SOC1 like protein OS=Malus domestica GN=MdSOC1b PE... [more]
A5X6G6_POPTO8.896e-1356.63MADS box transcription factor 5 OS=Populus tomento... [more]
D0VYC0_MALDO3.380e-1255.81SOC1 like protein OS=Malus domestica GN=MdSOC1a PE... [more]
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BLAST of FG534101 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
SOC1_ARATH2.656e-1250.57MADS-box protein SOC1 OS=Arabidopsis thaliana GN=S... [more]
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BLAST of FG534101 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G45660.12.765e-1350.57| Symbols: AGL20, SOC1, ATSOC1 | AGAMOUS-like 20 |... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 1..42
score: 3.8
IPR002487Transcription factor, K-boxPROFILEPS51297K_BOXcoord: 1..53
score: 9
NoneNo IPR availableSEGsegsegcoord: 42..56
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG534101 ID=FG534101; Name=FG534101; organism=Pisum sativum; type=EST; length=607bp
CATCAGTTGGAAAAGAGTGTAAGCACTGTTAGAGCAAGAAAGAATCAGGT
TTACAAGAATCAAATTGAGCAACTTAAAGAAAAGGAAAAAGTCCTACTTG
CTGAAAATTCAAGGCTCTCTAAGCAGCCGCAGCCGCAACTACTGCAACTA
CCACCACCGCCACCGCCAAATGATCATCCGAGAGAAAATCAACCTTACGC
AGAAAGCAGCAGTCCGAGCTCAGATGTGGTGACTGAATTGTTCATTGGCC
TACACAGGTCTAGTTGAACATAATGATATAATCATCTAGTGTATGTTTGG
TTTTACATTAATTCCAATGCATCTGAATTAACATTTTGAAACTACTTTCC
CTTATTGCATTGGAATTTGTTCAACTTAAGAACAAACATATATGCTTAAT
ACTTGCCTTATATACGTGCAAGTGTAGAGTAATGGGGAAAAGCCCTAATG
TCTCCAATGTATTTATTTGTTGAACAATGTGATGCACTGAACATATTTTC
ATCATTTTGTTTTTGTCAAATTGCTGTAAAAATTATAGATGGTCTTAAAA
TATATAAAATTAAGACCATTGCATCGTAATACTATTAGAGACAAAAGTGT
TGTCCTG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR002487TF_Kbox